Sinocyclocheilus rhinocerous: 107743249
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Entry
107743249 CDS
T04916
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1D-like isoform X1
KO
K04851
voltage-dependent calcium channel L type alpha-1D
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04010
MAPK signaling pathway
srx04020
Calcium signaling pathway
srx04218
Cellular senescence
srx04260
Cardiac muscle contraction
srx04261
Adrenergic signaling in cardiomyocytes
srx04270
Vascular smooth muscle contraction
srx04530
Tight junction
srx04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107743249
04020 Calcium signaling pathway
107743249
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
107743249
09144 Cellular community - eukaryotes
04530 Tight junction
107743249
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
107743249
09153 Circulatory system
04260 Cardiac muscle contraction
107743249
04261 Adrenergic signaling in cardiomyocytes
107743249
04270 Vascular smooth muscle contraction
107743249
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
srx04040
]
107743249
Ion channels [BR:
srx04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
107743249
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
CAC1F_C
GPHH
PKD_channel
FAM176
Motif
Other DBs
NCBI-GeneID:
107743249
NCBI-ProteinID:
XP_016411877
LinkDB
All DBs
Position
Unknown
AA seq
2112 aa
AA seq
DB search
MSANGRAPPAATPAAPPAASVPVSSVVPVGSLAQKKRQQYAKSKKQGSSANTRPQRALFC
LNLNNPIRRACISLVEWKPFDVFILIAIFANCMALAVYIPFPEDDSNSTNHDLETVEYAF
LIIFTIETFLKIIAYGLVMHQNAYVRNGWNMLDFVIVVIGLFSVVLEILTKDGEKESAGS
HPSVHGHGGKSGGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLF
VIIIYAIIGLELFIGKMHATCYFQGTDIIEDEPAPCAVNGHGRTCPINGTVCKEGWHGPN
GGITNFDNFMFAMLTVFQCITMEGWTDVLYWMNEAMGLELPWVYFVSLVIFGSFFVLNLV
LGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLKGYLDWITQAEDIDPENEEEDEESKR
NRVTLASLMEKKKKGFSWFSQSSDTHASMPASETESMNTEIEKEDEKATCCGPTCQKISK
SKFSRRWRRWNRLCRRNCRLAVKSVPFYWLVIILVFLNTLTISSEHYNQPLWLTQVQDVA
NKVLLALFTCEMLVKMYSLGLQAYFVSLFNRFDCFVVCGGITETILVEFEIMSPLGISVF
RCVRLLRIFKVTRHWASLSNLVASLLNSMKSIASLLLLLFLFIIIFSLLGMQVFGGKFNF
DETQTKRSTFDNFPQALLTVFQILTGEDWNAVMYDGIMAYGGPSSSGMIVCIYFIILFIC
GNYILLNVFLAIAVDNLADAESLNTDSGDKKKGDENEENEDDAKAGEEDEKDNAEEDEDE
PDVPAGPRPQISELIKKEKITPIPEGSAFFIFSNTNPIRVACHKLINHHIFTNLILVFIM
LSSASLAAEDPIRNFSARNIILGYFDYAFTAIFTVEIVLKVLGYADYVFTSMFTFEIVLK
MTTYGAFLHKGAFCRNYFNLLDLLVVGVSLVSFGIQSSAISVVKILRVLRVLRPLRAINR
AKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKGKFYRCNDAIKSSPEECKG
IYILYKEGDVNQPIIQKRHWHNSDFNFDNVLMAMMALFTVSTFEGWPALLYKAIDSNREN
LGPIYNYRVEISIFFIIYIIIIAFFMMNIFVGFVIVTFQEQGEKEYKNCELDKNQRQCVE
YALKARPLRRYIPKNPYQYKFWYVVNSTGFEYIMFVLILLNTICLAVQHYGQSELFNYVM
DILNMVFTAVFTVEMVLKLIAFKPRHYFTDAWNTFDALIVVGSVVDIAITEVNPTEAPQV
DESGNTEDSARISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIAMLF
FIYAVIGMQVFGKIAMVDHTQINRNNNFQTFPQAVLLLFRCATGEAWQDIMLACMPGKLC
DPESDYNPGEEMTCGSNFAIIYFITFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHH
LDEFKRIWSEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVAMNMPLNSD
GTVMFNATLFALVRTALKIKTEGNLEQANEELRAVIKKIWKRTSMKLLDQVVPPAGDDEV
TVGKFYATFLIQDYFRKFKKRKEEGLVGVHPAQNNTAIALQAGLRTLHDIGPEIRRAISC
DLQDDELVDFIPEEDEEIYRRNGGLFGNHINHINGDPRRSSGHQTNATQRPLQVQPPPHY
AHMEQPMGRLGRANAMAQQNHHRHHHHHHHHHHHHNSYNKSPKSTNINLNNANVSSLPNG
GHNRYYEHMPANGYPGSYYGEYDKPRSPHGQRRRYYETYIRSQGSDRRRPTIRREEEYEE
DRYSGEYYSGEEFYEDDSMLSGDRYPNSDQEYETPRGYHHPDSYYEDDEQPLYHDSCRSP
KRRLLPPTPQGNRRPSFNFECLRRQSSQDDLPHQHTALPLHLMQHQVMAVAGLDSSRAHR
LSPTRSTRSWASPPPTPASQDRTPYYTPLIRVDRPLRDSAHSSHSSIRKSSWYTDDPEYQ
RNYSPVHLQVPPEYRNQYHQKRGSATSLVEAVLISEGLGRYAKDPKFVAATKHEIADACE
MTIDEMESAASHLLNGGITPGVNGVNVFPIMGPRDYEMQDVSASYSDEEPELEPRPQYEE
DLADEMICITTL
NT seq
6339 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccaacggccgtgctccgcctgctgcgactcctgccgcgccccccgcagcctcc
gttcctgtatcgtcagtggtaccggtcggctcgctggcccagaagaagcggcagcagtat
gccaagagcaaaaaacagggcagttcggccaacacgcggccgcagagagctctcttctgc
ctcaacctcaacaaccccatccgccgggcctgtatcagcctcgtggaatggaagccattt
gatgtctttatattgatagcgattttcgccaactgcatggccttagctgtatacatcccc
tttcccgaggatgattccaactcaaccaaccacgacctggaaacagtcgaatatgccttc
cttatcattttcactatcgaaaccttcctgaagatcatagcgtacggcttggtgatgcat
cagaacgcgtatgtccgaaacggatggaacatgctggatttcgtcattgtcgtcatagga
ttgtttagtgttgtcttggaaattctgaccaaagatggggagaaggaatctgctggaagc
cacccgtccgttcacggccatggagggaaatcaggaggttttgatgtcaaagccctcaga
gcctttcgagtgctgcgaccgcttcgcctggtctcaggagtgcccagtttacaggtggtg
ctgaactccatcattaaagccatggttcctctcctccacatcgccctgctggttctgttc
gtcatcatcatctatgccatcatcggtttggagcttttcattggaaaaatgcacgctacc
tgttactttcaagggacagatataatagaggatgaacccgcgccatgtgccgttaatggt
catggccgcacatgccccattaacggcaccgtgtgtaaggagggctggcatggccccaac
ggaggcatcacgaacttcgacaacttcatgtttgccatgcttactgtgttccagtgcatc
actatggagggctggacggatgtgctctactggatgaatgaagctatggggttggagctg
ccctgggtgtactttgtgagcttggtcatcttcggctctttcttcgtcttgaacctggtt
ctgggtgtgttgagcggggagttctctaaagagcgagagaaggcgaaggctcgtggagat
ttccagaagctacgggagaaacagcagctggaggaagatctgaaaggttatctggactgg
atcacgcaagccgaagacatcgatcctgagaatgaggaggaagatgaggaaagcaaacgc
aaccgggttacactggccagcctgatggagaagaagaagaaaggctttagctggttcagc
cagtcctctgacactcatgcgagtatgccggcaagtgagacagaatccatgaatacagaa
attgagaaggaagatgagaaggcaacatgttgtggcccgacatgtcaaaaaatttcaaaa
tcaaaattcagtcggcgctggcgtcgctggaaccggttgtgtcggaggaattgtcgtttg
gctgtgaaatctgtgccgttctattggctggtgatcatcctggtgttcctcaacactttg
accatctcttcagaacattacaaccagcccttgtggctcacgcaagtccaggatgtggcc
aataaagtgctgctggccctgttcacgtgtgagatgttggtgaagatgtacagtctgggc
ctgcaggcttattttgtgtctctgtttaatcgctttgactgcttcgtggtgtgtggaggc
atcacagagaccatcctagtcgagtttgagatcatgtcacctctaggcatctcagtgttt
cgatgtgtgcgacttctcaggatctttaaagtcacacgtcactgggcgtctctcagtaac
ttggtggcatctctgctgaactccatgaagtccatcgcttctctactgctgctgctcttc
ctcttcatcataatcttcagcctcctcggtatgcaggtgttcggcggcaagtttaacttc
gacgagacacaaacgaagaggagcacctttgacaacttccctcaggccttgctcactgtg
tttcagattctgactggtgaagactggaatgccgtcatgtacgatggaattatggcgtat
ggcggcccatcatcgtcaggaatgattgtgtgcatctactttatcattctgttcatttgt
ggaaactacattcttctgaatgtgttcttggctatcgctgtggacaaccttgccgatgca
gagtctctgaacacagacagcggcgataagaagaaaggtgatgaaaacgaggaaaatgaa
gatgatgccaaggctggagaggaggatgagaaggacaatgcagaggaggatgaagatgag
ccggacgttcctgcggggccccgcccacagatctcagagctcattaagaaggagaaaatc
acgccaatcccagagggcagtgcgttcttcatctttagcaacacaaacccaattcgtgtc
gcgtgccacaagctgataaaccaccacatcttcaccaatctcatcctcgttttcattatg
ttaagctccgcctccttggcagctgaggacccaatcagaaacttctctgcccggaatatt
atacttggttactttgactatgctttcacggctatctttactgtagagatcgtgttaaag
gtcctaggctatgcagattatgtcttcactagtatgtttacatttgagatcgtgttgaag
atgaccacgtatggtgcgtttctccacaagggggctttctgcaggaactactttaatctt
ctcgatctgctggtggtcggcgtgtcgctggtgtccttcggaattcaatcgtcagccatc
tcagtggtgaagattctgagggttctgagggtgctgcgtccactcagggccataaacaga
gctaaaggactgaagcatgtggtccagtgtgtgtttgtggccatcagaactattggaaac
atcatgattgtcaccacactgttacagttcatgtttgcctgcattggtgtacagctcttc
aaggggaagttttatcgttgtaatgatgcaatcaagtccagcccagaggagtgcaaggga
atatatatcctgtataaggaaggtgacgtgaaccagccaatcattcagaagcgccattgg
cacaacagcgatttcaactttgataacgtgctcatggccatgatggctctattcacagtg
tccacgtttgaaggctggccagcgttgttgtacaaggccatagactccaaccgggagaac
ttgggtccgatctacaactaccgtgtggagatttccatcttcttcatcatctacattatc
atcatcgccttctttatgatgaacatcttcgtgggtttcgtcatcgtgacctttcaagaa
cagggagagaaagagtacaagaactgtgagctggacaagaaccagcgtcagtgtgtggag
tatgcgttaaaagcgcgtcctctcaggaggtacatcccaaagaacccctatcagtataag
ttctggtatgtggtgaactccaccggcttcgagtacatcatgtttgtcctgatcttactc
aacaccatctgtctcgccgttcagcactacggtcagtccgagctgttcaattatgttatg
gacatcctgaatatggtcttcactgccgtctttactgtggagatggtactcaaactgatc
gccttcaaaccccggcattatttcactgatgcatggaacacgtttgacgccttaattgtt
gtcggtagcgtcgtagatattgctatcactgaagtcaaccccacagaggcacctcaggtg
gatgagtcggggaacactgaggacagcgctcgcatttcaatcaccttcttccgtcttttt
cgagtgatgcgattggtcaagctgctgagcaggggggagggcatacgaacccttctctgg
accttcatcaagtccttccaggccctgccatatgtcgctttgctgatagccatgctgttc
ttcatctacgctgtcattggcatgcaggtgtttgggaaaattgccatggtggaccacaca
caaatcaacaggaacaacaactttcagacgttccctcaggctgtgcttctgctctttaga
tgtgcaacaggtgaagcctggcaggatatcatgttggcatgcatgccagggaagctgtgt
gacccagagtcagattataatcctggagaagagatgacctgcgggagcaactttgccatc
atctacttcatcaccttctacatgctctgcgccttcctgatcattaacctgtttgtggct
gtcatcatggacaactttgactatctgacccgtgattggtcgattctggggccacatcat
cttgatgaatttaagaggatttggtcagagtatgatccagaggcaaaaggcagaataaaa
catcttgatgtagtgacgttgttgcgccgtattcagcctcctcttggctttgggaagctc
tgtcctcatagagtcgcctgcaagaggctggtggctatgaacatgcctctgaacagtgac
ggcactgttatgtttaatgctacactttttgctcttgtgagaactgcactgaagatcaaa
acggaaggtaacctagagcaggcgaatgaagagctccgagccgtgattaagaagatctgg
aagagaacaagcatgaaacttctggatcaagtggtgccccctgctggtgatgatgaggta
acggtggggaagttctatgccactttcctgatacaggactactttaggaaattcaagaaa
cgcaaagaggaaggcctggtgggcgttcacccagcacagaacaacaccgccatcgccctg
caggctggccttcgtacgctgcatgacattgggccagaaatccgccgtgcgatatcatgt
gacctgcaggatgatgagctagtagactttataccagaggaggacgaagaaatttatagg
cgaaatggaggactctttggcaaccacatcaaccacataaatggagacccccggaggagc
tccggccaccagacaaatgccacacagcgccccctgcaggtgcagccacctccacattac
gcccacatggaacagcccatggggcgcctgggccgcgccaatgccatggcgcagcaaaac
catcatcgccaccaccaccaccatcatcaccatcatcatcatcacaactcctacaacaag
tcgcccaagtctaccaacatcaacctcaacaacgccaatgtgtccagcttacccaacgga
ggacacaatcgttactatgagcacatgcccgctaacggttacccgggatcgtactacgga
gaatacgacaagcccaggagcccacacggacaaagaaggcgctactatgaaacgtatatt
aggtcgcagggcagcgacagaagacgacccactatacgccgcgaagaggagtatgaagaa
gatcgttactctggagagtactacagcggagaggagttttacgaagatgacagcatgctg
tcgggtgacaggtaccccaacagtgaccaggaatacgagacgccacggggttaccatcat
cctgacagttactatgaggatgacgagcagcccctttatcatgattcatgtaggtcacca
aagagaagactgcttcctccaacaccgcaaggtaatcggagaccgtcgtttaattttgag
tgtctgcgcagacagagcagtcaagacgatcttcctcaccagcacaccgctcttccatta
catctcatgcaacaccaggtgatggcggtagcgggtctagactccagcagggctcacagg
ctttcacctactcgttctaccagatcatgggcttcacctcctcccactcctgcaagtcaa
gaccgaacgccgtactacacgccgcttatccgcgtggaccgtcctctgagggacagcgcc
cacagcagccactcatccatcaggaagagctcgtggtatacagacgaccctgagtaccag
aggaactactcgcccgttcacctgcaggtgccacccgagtacagaaaccagtaccaccag
aagagaggcagcgctaccagcctggtcgaagcggtcttgatatcagaaggactgggtcgc
tacgccaaggatccgaagttcgtggccgccacgaagcacgagatcgcggacgcgtgtgag
atgaccattgacgaaatggagagcgccgccagccatctcctgaacggcggcattacgccg
ggagtcaacggcgtcaacgtctttcccataatgggccccagagactacgagatgcaggat
gtctcggctagctacagcgacgaggaaccagaactcgaacccagaccgcagtacgaggag
gacctggcagacgaaatgatatgcattaccactttatag
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integrated database retrieval system
