Sinocyclocheilus rhinocerous: 107743565
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Entry
107743565 CDS
T04916
Name
(RefSeq) LIM domain-binding protein 3-like isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107743565
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
srx04990
]
107743565
Domain-containing proteins not elsewhere classified [BR:
srx04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
107743565
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
DUF4749
PDZ
PDZ_6
LIM_FHL2-3_N
zf-C3HC4_3
PDZ_2
Motif
Other DBs
NCBI-GeneID:
107743565
NCBI-ProteinID:
XP_016412332
UniProt:
A0A673GW68
LinkDB
All DBs
Position
Unknown
AA seq
617 aa
AA seq
DB search
MSSYTVSLAGPSPWGFRLQGGKDFNMPLTVSRITPGSKSASSNLIQGDIIVAIDGVSTEG
MTHLEAQNKIKSANFNLALTMQRSKRPTPVPMTTPRIDSPMPVIPHQKVITNSPANKEYL
PSFNPIALKDTALSTNKPIEVKGPGGKATIIHAQYNTPISMYSQDAIMDAIAGQSQARGS
ELSGNETDSPLSNLPVKDRVIDSASPVYQAVIPSETDKLEPADWAKRAAQLQSKSFRILA
HITGTEYMQDPDEEALRRSSFGLQTSMGYTSQYKTSISSSYTQPPPMQQPPPPMQHSSIQ
IPLGPPPSKVVSTATIVPAAYPSAPAPPMVHKPAPPPPAPAAAPASSSNRPPWVTDENFA
EKFDPSKPTTTKNIRVNPLPQAAPPPPAYIPNHVPAPAPAAPSPAFNPAPPPFNPAPFPP
VARGVAQRAERFAASNRTPLCGACNSIIRGPFLVALGRSWHPEEFNCHYCHTSLADVSFV
EEQNNVYCENCYGEFFAPTCARCNTKIMGEVMHALRQTWHTTCFVCAACGKPFGNSLFHM
EDGEPYCEKDYIALFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFVCAVCHVNLEGQPFY
SKKDKPLCKKHAHAINV
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgtacaccgtttccctcgctggaccttctccttggggcttccggttgcaagga
ggcaaggacttcaacatgcccctcaccgtttctaggattacaccagggagcaagtcagcc
tccagcaacctgattcagggtgacatcatcgtggcaattgatggggtcagcacagagggg
atgacacacctggaggcccaaaacaagatcaaatctgccaacttcaatctggctctcacc
atgcaaaggtcaaagcgacccactccagttcccatgacaacaccaaggattgactcccct
atgcctgtgatcccccatcagaaggttattaccaacagtcctgccaacaaagaatactta
cctagcttcaacccaatagctctgaaggacactgcactctccaccaacaaacccattgag
gtgaaggggcctggaggcaaggccaccatcatccatgcgcagtacaacacccccatcagc
atgtactcccaggatgctattatggatgccattgctggccagtcccaggccaggggtagc
gagctgtctggcaatgaaactgactctccgctatctaatctgccagttaaagaccgtgtt
atagacagtgcttccccagtgtatcaggccgtcatccccagtgaaactgataaactagag
ccggctgattgggccaaaagagccgcccagctgcagtccaagtccttccgtatcctcgcc
cacattactggaactgaatacatgcaagaccctgatgaggaagctctaagaagatcaagc
ttcggcttgcagacctctatgggttacacttcccagtacaaaacctccatctccagttct
tacacccagcctccacctatgcagcagccgccaccacccatgcagcacagctccatccag
atccctctaggtccacctccatctaaagtggtcagcactgccaccattgtgcccgcagcc
tacccatctgccccagctcctccaatggttcacaaacctgctcctcctccacctgctcct
gccgcagctccagcgtcttcttccaacaggcctccttgggttactgatgagaactttgcc
gagaaatttgaccctagcaaacccaccaccaccaaaaatatcagagtgaaccctcttccc
caggcggccccaccaccaccagcctacatccccaaccacgtccctgctcccgctcctgct
gcacccagccctgcattcaaccccgcccctcctccattcaaccctgcccccttcccacct
gtggctcgtggagttgctcaaagggcagagcggtttgcagccagcaacagaacacctctg
tgtggagcctgcaatagcatcatcaggggaccattcctggtggcactgggtcgttcctgg
catccagaggagttcaattgccattattgccacacgtccctggctgatgtcagctttgtg
gaggagcagaataatgtttactgtgaaaactgctatggcgaattctttgcacctacctgt
gctcgctgcaacaccaagatcatgggagaagtgatgcatgcactgcggcagacctggcac
accacttgctttgtgtgtgcagcttgtggaaagccctttggaaacagcctctttcatatg
gaggatggtgagccgtattgtgagaaagattatattgcactcttcagcacaaagtgccat
ggctgtgacttcccagttgaggcaggagacaaatttattgaagctcttggtcacacatgg
catgatacctgctttgtttgtgcggtgtgccatgtgaacctggaaggacaacctttctac
tccaagaaagacaagcccttatgcaagaagcatgcacatgccatcaatgtgtag
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