Sinocyclocheilus rhinocerous: 107743580
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Entry
107743580 CDS
T04916
Symbol
samm50
Name
(RefSeq) sorting and assembly machinery component 50 homolog isoform X1
KO
K07277
outer membrane protein insertion porin family
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
107743580 (samm50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
srx03029
]
107743580 (samm50)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srx02000
]
107743580 (samm50)
Mitochondrial biogenesis [BR:
srx03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
107743580 (samm50)
Transporters [BR:
srx02000
]
Other transporters
Pores ion channels [TC:
1
]
107743580 (samm50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Omp85
POTRA
Motif
Other DBs
NCBI-GeneID:
107743580
NCBI-ProteinID:
XP_016412401
UniProt:
A0A673K0N0
LinkDB
All DBs
Position
Unknown
AA seq
470 aa
AA seq
DB search
MGTVHARSMDSSYPMYGRDLGVNTDDLEVMEAVQETKQEVLENKDVVVQHVNIEGMGRTK
EDYLGYEISDVFTARNLVEVMRKSHEARQRLLRLGIFKEVEVVIDVSEGAEALPNGLDVT
FEVTELKRLTGSYNTMVGNNEGSMVLGIKLPNMFGRGEKLTFQFSYGTKETSYGLSFFKP
QSGYYERNFTLNLYKVTGQFPWSSLKETDRGVSTELNFPLWMTDHTLKWEGVWRELGCLA
RSASFAVREESGHTLKSALSHTMVIDTRNSAILPRRGALLRINQELAGYTGGDASFLKED
VELQLNKPFIWGSVLSASLWGGMIYPLGGQPTSIADRFYLGGPTSLRGFGMYSIGPQSEG
DYLGGEAYWAGGLHLYTPLPFHSNKGGLADLFRTHFFLNAGNLCNLNYGEGPYAHLQKLA
ECIRWSYGAGIILRLGNIARLELNYCFPMGVQSGDRICDGVQFGAGIRFL
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggggactgtgcacgcacggagtatggattcttcttaccccatgtatgggcgagacctg
ggcgtcaacacagatgatttggaagtgatggaggcggtgcaagaaactaaacaagaggtt
ttagaaaacaaagatgttgttgtacagcatgtcaacattgaagggatgggcagaactaaa
gaggattacttgggctatgaaatctctgatgtcttcactgccaggaacctggttgaagtg
atgagaaaatcccacgaggccagacagagattgctccgtctaggcatattcaaagaagtg
gaggtggtgattgatgtttcagaaggagcagaggcgctgccaaatggacttgatgttaca
tttgaggtgactgagcttaaacgacttaccggcagttataataccatggttggaaacaat
gaaggcagtatggtcttgggcattaaacttccaaacatgtttggccgaggagagaagctc
acctttcagttttcctatggaactaaggagacgtcatatggcctttccttcttcaaacca
cagtcgggatattatgaacgcaacttcactctaaacctatacaaagtcactggacagttc
ccatggagctctctaaaagagacggacaggggagtttctacagagcttaatttccctctg
tggatgacggatcacactctgaaatgggagggcgtgtggcgtgaactgggatgtctggcc
cgcagcgcctcctttgctgtgagagaggagagcggccacactcttaaatccgccctttct
cacaccatggtaatagacaccaggaactctgccatcttgccccgaagaggtgccttactg
cggatcaaccaggagctggcaggatacaccggcggagacgccagctttctcaaagaggac
gttgagctgcagcttaacaaaccatttatctggggatcggtgttatctgcatctttatgg
ggagggatgatctatcctcttgggggtcagcctacctccattgcagacaggttctacctg
ggcggcccaaccagtttgagaggtttcggcatgtacagtataggccctcagagtgaaggt
gattatctgggtggggaagcgtattgggctggtgggcttcatctctacacacccctcccc
ttccactcaaacaagggcggcctggctgacctcttcagaacacacttcttccttaatgct
ggaaacctttgcaacctcaactacggagagggaccatacgcacatctgcagaagctagca
gagtgtatccgctggtcttacggcgcaggaataattctacgactgggaaacattgctagg
cttgaactcaattactgctttccaatgggtgttcaaagcggagacaggatatgtgacggt
gtgcagtttggagcaggcatccgtttcctgtga
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