Sinocyclocheilus rhinocerous: 107743637
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Entry
107743637 CDS
T04916
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107743637
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
srx03041
]
107743637
Spliceosome [BR:
srx03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
107743637
Complex C
U5 SnRNP specific factors
107743637
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
107743637
NCBI-ProteinID:
XP_016412465
UniProt:
A0A673IUD0
LinkDB
All DBs
Position
Unknown
AA seq
2342 aa
AA seq
DB search
MAAAFPYRGVPVTMPPGVPPPPPAVAPVPDYMTEEKLQEKARKWQQLQAKRYSEKRKFGF
VDAQKEDMPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQI
RDVPVLYHITGAISFVNEIPWVIEPVYISQWGTMWIMMRREKRDRRHFKRMRFPPFDDEE
PPLDYADNILDVEPLEAIQMELDPEEDSSVAEWLYEHQPLKDTTKYVNGTTYRRWQFTLP
MMSTLYRLANQLLTDLVDKNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDW
NEFNDINKIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFD
PLINPISHRHSVKSQEPLPDDDEEFELPEYVEPLLKETPLYTDNTANGIALLWAPRPFNL
RSGRTRRAIDVPLIKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLF
RSFKATKFFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTK
ERKKSRFGNAFHLCREVLRLSKLVVDSHVQYRLGNVDAFQLSDGLQYIFAHVGQLTGMYR
YKYKLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLG
NLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHL
SESWRCWKANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCK
KNLGRLTRLYLKAEQERQHNYLKDGPYITAEEAVAIYTTTVHWLESRRFSPIPFPPLSYK
HDTKLLILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKE
VGIEFMDLYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVY
KWCQGINNLQDVWETAEGECNVMLESRYEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKN
NVVINYKDMNHTNSYGIIRGLQFASFIVHYYGLVMDLLVLGLHRASEMAGPPQMPNDFLS
FQDTATESAHPIRLYCRYIDRIHIFFRFSADEARDLIQRYLTEHPDPNNENIVGYNNKKC
WPRDARMRLMKHDVNLGRAVFWDIKNRLPRSVTTIQWENSFVSVYSKDNPNLLFNMCGFE
CRILPKCRTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGS
TTFTKIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPP
VVFYTPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQ
PWESEFIDSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYD
KGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGT
YFPTWEGLFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQV
QLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESVVMDLCQVFDQELDALEIETVQKET
IHPRKSYKMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDS
HDIERYARAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGGKPLIQQAMAKI
MKANPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKT
FEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLP
VEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQ
MVLFNLYDDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTVTEPHHIWPTLTD
EEWIKVEVQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQT
KEQSQLTATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVS
SDDIKETGYTYILPKNVLKKFICISDLRAQIAGYLYGTSPPDNPQVKEIRCIVMVPQWGT
HQTVHLPNQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKVMADNPSWDGEKTII
ITCSFTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMV
PGQVSWNYNFMGVRHDPNMKYDLQLANPKEFYHEVHRPSHFLNFASLQEGEIYNADREDM
YA
NT seq
7029 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgcattcccctacagaggtgtgcctgtaacaatgcctccaggtgttcctcca
cctcctcctgctgttgctccagtaccagattacatgactgaggagaaactgcaagagaaa
gctcggaaatggcagcagcttcaggccaaacgctactcggagaagaggaaatttggcttt
gtggatgctcagaaagaggacatgccacctgagcatgtgcgcaaaatcatcagggatcat
ggtgacatgacgaacaggaaatttcggcatgacaagagggtctaccttggagccttgaaa
tatatgccccatgcagtgctcaaactgctggagaacatgcccatgccctgggagcagatc
agagatgttcctgtgctctaccacattactggtgccatttcctttgtaaatgaaatccca
tgggtgattgagccggtgtacatttctcagtggggcacgatgtggatcatgatgcgtcgt
gagaagcgagacagacggcactttaagcgcatgcgtttccccccatttgatgatgaagag
cctccattggattatgcggacaacatcctggatgttgagcctctggaggctatccagatg
gagctggaccctgaggaggactcctctgtggcagaatggttatatgagcatcaacctctg
aaagataccacaaaatatgtgaacgggaccacatacagacgctggcaattcactttacca
atgatgtctactctgtatcgattggctaatcagttgcttacagacttggtggataaaaac
tacttctacttgttcgacttgaaggctttcttcacctctaaagcgttgaacatggccatt
ccagggggacccaaatttgagcctcttgtcagagacattaacctccaggatgaagactgg
aatgagttcaacgacatcaacaagatcatcatcagacaaccaatcaggacagaatacaaa
attgcattcccttacctatacaacaacctgccacatcatgtgcatctcacctggtaccac
acaccaaacgtggtgttcatcaagactgaggatcctgatctgcccgccttctactttgac
cctctgatcaaccccatctctcataggcactccgtcaagagccaagagccactgccagat
gatgatgaggagtttgaactgcctgagtatgttgagccattactgaaggagactcctctc
tatactgacaacacagccaatggaattgcgctgttgtgggcacctcgtccatttaatctt
cgctcgggaagaaccagacgagccattgatgtgcctctcatcaaaaactggtatcgtgag
cattgtcctgcgggccagcctgtgaaggtacgtgtgtcttaccagaagctcctgaagtac
tacgtgctgaatgctctaaaacacagaccacctaaggcacagaaaaagagatacctgttc
cgctctttcaaggccaccaaattcttccagtccacaaagctggattgggtagaagttggt
ctacaggtgtgccggcagggctacaacatgctgaacctgctgattcacagaaagaacctc
aactacctgcacttggactacaacttcaacttgaagcctgtgaaaaccctcaccacaaag
gaacgtaagaagtccagattcgggaatgcgttccacttgtgccgtgaggttctgcgtttg
agcaagcttgtggtggacagccatgtgcagtacaggcttggaaatgttgacgctttccag
ctgtcagatggactgcagtacatcttcgcccatgtcggtcaattgactggcatgtaccgc
tacaagtacaagctcatgaggcagatcagaatgtgcaaagatctgaagcatctcatctac
taccgcttcaacacaggcccagtcggaaaaggtccaggctgtgggttctgggctccagga
tggagagtctggctgttcttcatgagaggaatcactcctcttctggagcggtggcttggc
aatcttctggccaggcagtttgagggtcgacactccaagggtgttgcaaagactgtgacc
aaacagcgtgtggaatctcactttgatctggagctgagagctgctgtgatgcatgacatc
ctggatatgatgcctgagggtatcaagcagaacaaggccagaaccatcttgcagcatctc
agcgagtcatggagatgctggaaggccaacatcccttggaaggttcctgggcttccaacc
cccattgagaacatgattctccgctacgtgaaggccaaagctgactggtggaccaacaca
gcccactacaaccgtgagagaatcagaagaggagccactgtggataagactgtgtgcaag
aagaacctgggacgtctcactcgactctatctaaaggcggagcaggagagacagcacaat
tacctgaaggatggaccttacatcacagctgaggaggccgtggccatctacaccaccaca
gtgcactggttggagagtcgtcgtttctctccgatccccttccctcctctgtcttacaaa
catgacactaagctgctcatcctggctttggagagactcaaggaggcttacagtgtgaag
tcgaggctgaaccagtcacagcgtgaggagttgggtctgattgagcaggcctatgacaac
cctcatgaggctctgtccagaatcaaacgtcacctcctcactcagagagcgttcaaagag
gtgggcatcgagttcatggacctttacagtcacttggtgccggtttatgatgttgagcct
ctggaaaagattaccgacgcatacctggatcagtacctctggtacgaagcagacaagcgc
agactttttccaccctggattaaaccagctgatacagagccgcctccactgctggtgtac
aaatggtgccaaggaatcaacaacctgcaggatgtgtgggagacggcagaaggcgaatgc
aacgtcatgctggagtctcgctatgagaagatgtatgagaagattgacttgacactgctg
aacaggcttctacgtctcattgttgatcacaacattgccgattacatgacggccaaaaac
aacgttgtcattaactataaggacatgaaccacacaaactcgtatggtatcatccgcggc
ctgcagtttgcctctttcattgtgcactactatgggctggtgatggacctgctggtgctg
ggtctgcacagagccagtgagatggctggaccgcctcagatgcccaatgacttcctcagc
ttccaggacacggccactgagagtgcccatcctatacgtctatactgcagatacatagac
cgcattcacatctttttcaggttctctgctgatgaggcgagagatctgatccagaggtac
ttgacagagcacccagaccccaacaatgagaacattgttggctacaacaataagaaatgc
tggccccgagatgctaggatgagactgatgaaacatgatgtgaacttgggccgtgctgtg
ttttgggacatcaagaatcgcctgcctcgttctgtgaccacaattcagtgggagaacagc
tttgtgtctgtgtatagcaaggacaaccccaacctactcttcaacatgtgtggctttgag
tgtcgtatcctccccaagtgccgcactagttatgaggagtttacgcacaaagatggagtg
tggaatttgcagaatgaggtaacaaaggaaaggacagcacagtgtttcctgcgtgtagat
gatgagtccatgcagaggttccacaacagagtgcgacagattctgatggcttctgggtcc
accaccttcaccaagattgtgaacaagtggaacactgctctgattggtctgatgacatac
ttccgtgaagccgtggtcaacacccaagagcttttggacctgctggtgaagtgtgagaat
aagatccaaacccgtatcaagattggattgaactccaaaatgcctagtcgtttccctcct
gtggtgttttacacccctaaggagttgggaggactgggaatgctttccatgggacacgta
ctgattccacagtctgaccttaggtggtccaaacagactgatgtgggcatcactcatttc
cgctccggtatgagtcatgaggaggatcagttgattcctaatctgtaccgctacatccag
ccatgggagagcgagttcattgactcccagagagtttgggccgaatacgccctcaaacga
caagaggccattgctcagaacagacgtttgacactggaggatctggaggactcctgggac
agaggtattccacgtatcaacacactcttccaaaaggacagacacactctggcttatgac
aagggctggagagtcagaacagacttcaagcagtaccaggtgttgaagcaaaatccattc
tggtggactcaccagagacatgatgggaaattgtggaatttaaacaactaccgtaccgac
atgatccaggcacttggaggcgtggaaggcattcttgagcatacgcttttcaagggaacc
tacttccccacctgggagggtctcttttgggagaaggccagtggtttcgaagagtccatg
aaatggaagaaactcaccaatgctcagagatctggtctgaaccagattcctaatcgacga
ttcaccttgtggtggtctcctacaatcaacagagccaatgtatatgtgggtttccaagtg
cagttggacctcactggaatcttcatgcatggtaaaatcccaactctcaagatctctctg
atccagatcttcagagctcacttgtggcagaagattcatgagagcgttgtcatggatctc
tgtcaggtgtttgaccaagagctggatgctttggagatcgagactgtccagaaagagaca
atccatcccaggaagtcttacaaaatgaattcctcctgtgctgacattctgttgtttgcc
tcctacaagtggaacgtctctcgcccctcgcttctagcagactccaaggatgttatggac
agcaccaccacacagaagtactggattgacattcagctcagatggggtgactacgactcc
catgacattgagcgatacgccagggccaagttcttggactacaccactgacaacatgagt
atttacccatcacccactggagtactgattgccattgatctggcctacaaccttcacagt
gcttatggtaactggttccctgggggcaagcccctgatccaacaggccatggcgaagata
atgaaggccaacccagctctgtatgtgctgagagagcgaatccgcaagggtctgcaactc
tactcttcagagcccactgagccttacctgtcttcccagaactacggagagctgttctcc
aaccagatcatctggtttgtggatgacaccaatgtgtatagagtcaccatccacaagacc
tttgaaggtaacttgaccacaaaaccaatcaatggagccattttcatcttcaaccccaga
actggacagcttttcctgaaaatcattcacacatctgtatgggcaggacaaaagcgtctt
ggacagctggctaagtggaaaactgctgaagaagtggctgccctgatccgatcgctgcct
gttgaagagcagcccaagcagattattgtgaccaggaagggcatgttggatcctcttgag
gtgcacttgctggacttccccaacattgtaatcaagggctctgagctccagctgcccttc
caggcctgtctgaaagtggagaagtttggagacctcattctgaaggccacagagcctcag
atggtcttgttcaatctgtatgacgactggctgaagaccatctcctcttacactgcattc
tctcgtttgatcttaatcctgagagcacttcacgtcaacaacgatcgtgctaaagttatc
ctgaagcccgataaaaccacagtcactgagcctcaccacatctggcccacactgactgat
gaagagtggatcaaagtggaggtgcaactcaaagatctcatcctggctgactatggcaag
aagaacaatgtgaatgtggcatctttgacccagtctgaaatcagggacatcatcctgggt
atggagatctccgctccatcccagcagagacagcaaatcgctgagatcgagaagcagacc
aaggagcagtctcagctaacagccacacaaactcgcactgtcaacaaacacggagatgag
attatcacctccaccaccagcaactacgagacacagaccttctcttccaaaactgaatgg
agagttagggcgatctctgctgccaacttgcacttacgtactaaccacatctatgtgtca
tcggatgacattaaagaaactggctacacttacatcctgcccaagaacgttttgaaaaag
ttcatctgcatctcggatctgcgtgctcagattgcaggttatctgtatggaaccagccct
ccagataaccctcaggtaaaggaaatccgctgcatcgtgatggtgccacagtggggtacg
catcagaccgttcacctgcccaaccagctaccacaacacgagtacttgaaggaaatggag
cctcttggatggatccatacacagcccaatgaatcgccccagctctctcctcaagatgta
accacccatgcaaaggtcatggctgacaacccatcctgggatggcgagaagactatcatt
attacttgcagtttcacccctggttcctgcacgctgacggcctacaagctgactcccagt
ggatatgagtggggtcgacaaaacacagataagggaaataaccccaaaggttacttgccc
tctcactacgaaagagtccaaatgcttttgtctgaccgtttccttggcttcttcatggtg
cctggccaagtctcctggaactacaacttcatgggtgttcgccatgatcccaacatgaaa
tatgacctacagttggccaacccgaaagagttctaccatgaagttcacaggccatctcac
ttcctcaactttgcttctctgcaggagggtgaaatctacaatgctgatcgtgaagatatg
tatgcataa
DBGET
integrated database retrieval system
