Sinocyclocheilus rhinocerous: 107743660
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Entry
107743660 CDS
T04916
Name
(RefSeq) hypoxia-inducible factor 1-alpha-like isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04137
Mitophagy - animal
srx04140
Autophagy - animal
srx04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107743660
04137 Mitophagy - animal
107743660
04148 Efferocytosis
107743660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srx03000
]
107743660
Transcription factors [BR:
srx03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
107743660
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
PAS
HIF-1
PAS_9
PAS_4
Motif
Other DBs
NCBI-GeneID:
107743660
NCBI-ProteinID:
XP_016412499
UniProt:
A0A673K4H9
LinkDB
All DBs
Position
Unknown
AA seq
632 aa
AA seq
DB search
MVNSAMKRPSLEQRKVRSRDAARCRRSQETEVFYELAHSLPLPRRIASHLDKAAIMRVTL
SYLRMNRLIQSAGPTKTPTEETENPTDAFYQQALAGFILVMTEEGDMVFLSESVSKYIGI
TQLELLGQNVYEFVHPCDQEELRDIIATRPGVSKKKTEKSTEHNFFLRMKSILTHTGRTV
NIKSATWKVLHCTGHMQTFSGDSENAPPAGSFLTLLCEPIPHPSSIEFPLDSNTFLTRHN
MDLSFTQCDGQVTELIGYQPDDLIGQSAYEFYHALDFDHVTRSLHILFSKGQVCTSHYRF
LAKNGGFVWTETQATVLYNSRTSQPKAVVCLNFILSGVEEADVVFSLEQTCEKPKPRAEK
LSVLEEEEEDSDMEEESSTAKLFLQMKENPEDLLQLAPHSGDAVISLTDGVELSFCRPSS
PNTVPECPQDFCTPELRRLLSPIFDRPTKSPPAASPAEELPMEMEGVEKFFALKPEESVT
LKGQSEAMDELDLDMLAPYISMDDDFQLTFLPQGEMAVPSDMLTKTSRKRCLEDEEENDI
PVLAAKLEKKPMSGSIEEQLLLSHTLLNSLSDDGSEEFEPPPQKRSQLLTDRDPLLGGAQ
ALCDTAALMRDTFLSRPPDLKRPIAETMASLT
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggtgaactcagcgatgaaaaggcccagtttggagcagcggaaggtgcgttcacgtgat
gcagcacgctgtaggaggagtcaggagactgaagtgttttacgagctggcccattcatta
ccccttccacgacgtatcgcctcccacctggacaaagctgccatcatgagggtgacgctc
agctatctgcgcatgaaccgcttgatccaatcagcagggccaaccaaaacaccgactgaa
gaaactgagaatcccactgatgccttttatcagcaggcactggctggctttattctggtg
atgactgaggaaggggacatggtcttcctctcagagagtgtcagcaaatacatcggcata
acacagctggagctgcttggacagaatgtgtatgaatttgttcatccctgtgaccaagaa
gaattacgagatatcattgccacaagacctggcgtttcaaagaaaaagacagagaagtcg
accgaacataatttttttcttcggatgaagagcatactcacccacacaggaagaacagtt
aatatcaagtctgcaacctggaaggtccttcattgcacaggacacatgcagacgttcagc
ggagatagtgagaatgcaccccctgctggcagcttcctgactttgctgtgcgaacccatt
cctcacccctccagcattgaattcccactagacagcaacactttcctcacacgccataac
atggatttgagtttcacacaatgtgacggacaagtcactgagctcattggataccaaccc
gatgatctgattggccagtctgcctatgagttttatcacgcccttgattttgatcatgtg
accaggagtttacacatcttgttctccaagggccaggtgtgcaccagccattaccgcttc
ctggctaagaatggaggatttgtctggactgagactcaagccactgtcctctacaacagc
aggacctctcaacccaaggctgtggtctgcctcaactttatcctcagtggtgtagaagag
gcggatgttgtgttctcattagaacagacctgtgagaaaccaaagcccagagctgagaag
ctgagcgtgctggaggaggaggaggaggactcagatatggaggaggagagcagcactgcg
aaactcttcctccagatgaaggagaacccagaggacttactgcagctggcacctcattct
ggagacgctgtcatttccctaacagacggtgtggagttgtccttctgccgtccatctagt
cccaacactgtcccagaatgccctcaggacttctgtacgcctgaactccgtcggctcctt
tctccaatattcgacaggcccaccaaatctccacccgctgcgagccccgctgaagagctg
cccatggagatggaaggggtggagaagttcttcgccctcaaaccagaggagagcgtaact
ctgaaaggacaatcggaggctatggatgagcttgatttggacatgttggctccatatatc
tccatggatgatgacttccagttgaccttcctgccccagggtgaaatggctgtaccgtca
gatatgctgaccaagacttcaaggaaacgatgtttggaagacgaggaggaaaatgacatt
cctgttctggctgccaaattggagaagaaaccaatgagtggctccatagaggaacagctt
ctgctcagccacacattactgaatagcttgtctgatgatggttcggaagaatttgaacca
ccacctcaaaagcgaagtcagctcttgaccgacagggacccgctgctgggcggagcgcag
gcattgtgcgatacagcagctctcatgagggacaccttcctgtcgcgcccgcctgactta
aagagacccattgctgaaacaatggcatcccttacttga
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