Sinocyclocheilus rhinocerous: 107743664
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Entry
107743664 CDS
T04916
Name
(RefSeq) lissencephaly-1 homolog A-like isoform X1
KO
K16794
platelet-activating factor acetylhydrolase IB subunit alpha
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx00565
Ether lipid metabolism
srx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09100 Metabolism
09103 Lipid metabolism
00565 Ether lipid metabolism
107743664
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
srx03036
]
107743664
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
srx04147
]
107743664
Chromosome and associated proteins [BR:
srx03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
107743664
Exosome [BR:
srx04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107743664
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
NBCH_WD40
Beta-prop_Nup120_160
Beta-prop_EML
Beta-prop_DCAF4
Beta-prop_Vps41
WDR90_beta-prop_4th
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_DCAF12
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
LisH_PAC1
LisH
eIF2A
Nucleoporin_N
Beta-prop_WDR35_TULP_N
Ge1_WD40
Beta-prop_NUP159_NUP214
Pox_A_type_inc
Beta-prop_WDR11_2nd
DUF2570
LisH_2
Motif
Other DBs
NCBI-GeneID:
107743664
NCBI-ProteinID:
XP_016412509
UniProt:
A0A673KEF1
LinkDB
All DBs
Position
Unknown
AA seq
410 aa
AA seq
DB search
MVLSQRQRDELNRALADYLRSNGYEEAYSVFKKEAELDMNEELDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEITLGGPVGQKRDPKEWIPRPPERYALSGHRSPVTRVIFHPVF
SVIVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQ
GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMV
RPNQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTILEATGSE
AKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLVHPGGKFIVSCADDK
TLRIWDYKNKRCMKTLSAHEHFVTSLDFHKSAPYVVTGSVDQTVKVWECR
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgtcacagaggcaacgtgacgagctaaaccgagcgctagctgattaccttcgt
tccaatggatatgaagaggcatattcagttttcaaaaaggaggcggaattagacatgaat
gaggaattggataagaagtatgcaggtctattggaaaagaaatggacttcagtcatcaga
ttacagaaaaaggtgatggaattagaatcaaaactgaatgaggcaaaagaagagattact
ttaggtgggccagttggacagaagcgagaccccaaagaatggattccccgtcctcctgag
agatacgccctgagcggccacaggagtcctgtcaccagagtcattttccatcctgttttc
agcgtcatagtctctgcctcagaggacgcaacaataaaggtatgggactatgaaacgggc
gactttgagcggaccctcaagggccacacagactcggtgcaggacatttcctttgaccat
actggaaagctgctagcctcctgttcagcggacatgaccattaagctctgggacttccag
ggcttcgagtgtatcaggaccatgcacgggcatgaccataatgtttcatctgtagctatt
atgcccaatggagatcacatagtttctgcctcaagggataaaaccattaaaatgtgggag
gtggccactgggtactgtgtcaagacattcaccggccacagagagtgggtgcgcatggtg
cggcccaaccaagatgggaccctgatcgctagtagttctaatgaccagacggtgcgcgtt
tgggtggtggccacaaaagaatgcaaggcggagctgcgtgagcatgagcatgttgtggag
tgcatttcttgggcccctgaaagcgcccatcccaccatcctagaggcgactggctcagag
gccaagaagagtgggaaacctggtcctttcctgttgtctggttccagagacaagactatc
aagatgtgggatgtgagcactggcatgtgccttatgacactggttggccatgataactgg
gtgcgtggggttcttgtgcaccctggaggaaagttcatcgtaagctgtgctgatgacaag
actttgaggatctgggactacaaaaacaagcgctgcatgaagaccttgagtgcccatgaa
cattttgttacctctctggatttccacaaatcggctccgtacgtcgtcaccgggagcgta
gatcaaacagtaaaagtgtgggagtgtcgctga
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