Sinocyclocheilus rhinocerous: 107743720
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Entry
107743720 CDS
T04916
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit-like
KO
K07466
replication factor A1
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03030
DNA replication
srx03420
Nucleotide excision repair
srx03430
Mismatch repair
srx03440
Homologous recombination
srx03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107743720
03420 Nucleotide excision repair
107743720
03430 Mismatch repair
107743720
03440 Homologous recombination
107743720
03460 Fanconi anemia pathway
107743720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srx03000
]
107743720
03032 DNA replication proteins [BR:
srx03032
]
107743720
03400 DNA repair and recombination proteins [BR:
srx03400
]
107743720
Transcription factors [BR:
srx03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
107743720
DNA replication proteins [BR:
srx03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
107743720
DNA repair and recombination proteins [BR:
srx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
107743720
MMR (mismatch excision repair)
107743720
DSBR (double strand breaks repair)
HR (homologous recombination)
107743720
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
Motif
Other DBs
NCBI-GeneID:
107743720
NCBI-ProteinID:
XP_016412598
LinkDB
All DBs
Position
Unknown
AA seq
573 aa
AA seq
DB search
MTVPLSEGAIESLTKGIEVSNPVLQCVNIRKIDGGNGLSRFRLMMSDGLHTMSSFMLSTQ
LNPMAEQNQLASNCVCMLKRSVTNVLKDGRRVVVILDMDVIKSADQMAGKIGDPTPYVEG
QSKPQQNAAPAPTVRPLQPPNGSDGSMNRPSAQSFGKKPMAAPNTPGGSSKVVPIASLNP
YQSKWTVRARVTNKSAIRTWSNSRGDGKLFSMELVDESGEIRATGFNNEVDKFYSLIEQG
KVYYISKGTLKIANKQFSSLKNDYEMTLNGETTISPCEDSHDVPVVQCDFVSIADLECRE
KDTIVDVIGVCKNTEDVMRIMTKNSREVSKRNIQLMDMSGRIIQLTMWGSDAETFDGSGQ
PILAIKGARLSDFGGRSLSTLYSSTVMINPDIPEAYKLRGWYDKEGHAMDGQSMTELRGP
GGGGGNTNWKTLAEVKNEHLGHGDKVCHPHIKIVYRCEKCDKEFPDFKYRLMLSANIADF
GDNQWVICFQDSAETLLGQNSGYLGQLKDSNEPAFDEVFQHANFNTFVFRNRVKLETYND
ESRIKVTVVDAKPVDHREYSKRLIINIRKLAAQ
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgactgttccactgtcagaaggggcaattgagtccctgacaaaaggaattgaagtcagc
aaccctgttctgcagtgtgtgaacattcgtaagattgatgggggaaatggcctgtcccgt
ttccgtctcatgatgagtgatgggctacacaccatgtcctcattcatgctctccacacag
ctcaatcccatggctgagcaaaaccagttggcctctaactgtgtatgtatgctgaaaaga
agcgtcactaatgttctcaaagatggacgacgtgtggtagttatactggacatggacgtg
atcaagtctgctgaccagatggcaggaaaaattggagacccaactccttatgtggagggc
cagtcaaagccacaacagaatgcagctccggctccaactgtacgtccattacagcctccg
aatggaagtgatggttcaatgaacagaccttctgctcagagcttcgggaaaaagcccatg
gctgcccccaacactcctggaggcagctctaaagtcgttcccattgccagcctcaatcca
taccagtcaaaatggactgttagagccagagtcaccaacaagagtgccatccgcacatgg
agtaactccagaggggatgggaagctcttctccatggagcttgtggatgaaagcggggag
atcagagcaactggatttaataacgaggtggacaaattctactcactcatcgagcaggga
aaggtctactacatctcaaaaggcaccctgaaaattgccaacaaacaattctcttcgctt
aagaatgactatgagatgactttaaacggtgagacaaccatcagcccttgcgaggacagc
catgatgtacccgtggtgcagtgcgactttgtttccattgctgacctggagtgccgggag
aaagacaccatcgtagatgtgattggagtgtgtaaaaacacagaggatgtgatgcgcatc
atgaccaagaacagtcgtgaggtttcgaagaggaacatccaactgatggacatgtccggc
agaatcatccagctcaccatgtggggtagtgatgcagagacgtttgatggcagtgggcag
cctatcttggccattaagggagcaagattgtctgactttggtgggcgttctctctccact
ctctacagcagcacggtcatgatcaaccctgacattcccgaggcatacaaactgcgggga
tggtatgataaggaaggacatgctatggatggacagtcgatgactgagttgagaggacct
ggtggtggtggtggaaacacaaactggaagaccctggcggaagtcaagaatgagcacttg
ggacatggagacaaagtatgtcatccacacattaagattgtgtaccgctgtgagaaatgc
gacaaagagttccccgacttcaaatatcgtctcatgctctcggccaacattgctgatttt
ggagacaaccaatgggtgatttgctttcaggacagtgccgaaaccctcctgggccaaaac
tcaggttatctcggccaactcaaggactcgaacgaacctgcatttgatgaggtctttcag
catgcaaacttcaatacttttgtcttccggaaccgagtgaagctggagacctacaatgac
gaatcgcgcattaaagtgacagtagtggacgccaagccagtggaccacagagaatacagc
aaacggctgatcatcaacataaggaagttggctgcacagtag
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integrated database retrieval system
