Sinocyclocheilus rhinocerous: 107743787
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Entry
107743787 CDS
T04916
Name
(RefSeq) ATP-dependent RNA helicase DHX8-like
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107743787
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
srx03041
]
107743787
Enzymes [BR:
srx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107743787
Spliceosome [BR:
srx03041
]
Complex C
Other components
Step II factors
107743787
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
HA2_N
AAA_22
DEAD
AAA_19
GIPC1_GH2
nSTAND3
AAA_16
T2SSE
TsaE
PhoH
Sigma54_activ_2
ABC_tran
OB_RRP5_4th
Motif
Other DBs
NCBI-GeneID:
107743787
NCBI-ProteinID:
XP_016412673
LinkDB
All DBs
Position
Unknown
AA seq
987 aa
AA seq
DB search
MAEIGEDELKKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKHPTIDGFKSVLVKN
GADFSDSLVSNLLRLIQTMRPPAKASTSKGSHPVAKPKNEKDQLKELFPALCRPDNPNTR
TMLDEDDVKVADDAMKELEMFMPSVSGTEPSSSKHRSETSSSSKKKRRSRSRSRSRDRDR
DRERDKDRRRRHRSRSRSRSRSNERDRRKRRSRWHSRSRSRSPARGDRDKGSDRWKDKHV
DRPPPEEPSVGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVVS
KGQRVKVKVLSFTGSKTSLSMKDVDQDTGEDLNPNRRRNVGGEGQEESAMRNPDRPTNLN
LGHAPEVEDDTLERKRLTKISDPEKWEIKQMIAANVLSKEEFPDFDEETGILPKVDDEED
EDLEIELVEEEPPFLRGHTKQSMDMSPVKIVKNPDGSLSQAAMMQSALAKERREVKQAQR
EAEMDSIPTGLNKHWVDPLPDTDGRQIAANMRGIGMMPNDIPEWKKHAFGGNKASYGKKT
QLSILEQRESLPIYKLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTTRGKIG
CTQPRRVAAMSVAKRVSEEYGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDP
DLGQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRTDMKLIAMGINDLLSFDFMDAPPMET
LITAMEQLYTLGSLDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLS
VQNVFYRPKDKQALADQKKAKFHQPEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLR
RAQDIRKQMLGIMDRHKLDVVSCGKATVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVV
YIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFSPAFFKVSDPTRLSKQK
KQQRLEPLYNRYEEPNAWRISRAFRRR
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atggcagagatcggggaagacgagctcaaaaagctcgaatatttgtctttggtgtctaaa
gtttgtaccgaacttgacaaccatttaggaatcaacgataaggaccttgctgagtttgta
atcagtcttgctgagaaacatccaaccattgatggatttaagtcagtgctggtaaaaaat
ggagccgatttctcagattcactcgtcagcaatttgcttcgtctcattcaaaccatgcgt
cctcctgcaaaagcatctaccagtaaaggatctcatcctgtggctaaaccaaagaatgaa
aaggaccagctgaaagagctgtttccagctctgtgcagacctgacaatcctaatactagg
actatgctggatgaggatgatgtgaaagttgctgatgatgccatgaaagagttggagatg
tttatgcctagtgttagtggtacagaacctagcagcagtaaacacagatccgaaaccagc
agcagcagtaagaagaagcggaggagcagaagccgcagtcggagcagagacagagacagg
gatagggaaagagacaaagacagacggagacgccatcgctctcgctcccgttccagatct
cgctccaatgagagagacagaaggaagcgcaggagccgctggcactctcgcagcaggtcc
aggagtcctgcacggggagaccgagataaaggctccgaccgctggaaggacaaacatgtt
gaccggcccccaccggaggagccatctgtgggggatatctacaatggcaaagtcaccagt
attatgcagtttggctgctttgtgcagttggaaggtctcaggaaacgctgggaaggcttg
gtccatatttctgagctcagaagagaaggtcgggtagcaaatgtggcagatgtggtcagc
aaaggtcaaagggtcaaagtcaaggtgttgtccttcactggatccaaaacaagtctcagt
atgaaggacgttgaccaggacactggtgaagatcttaaccctaacaggaggagaaatgtg
ggtggagaaggtcaggaagagtcggccatgaggaatcctgacagacccactaacctcaac
ctgggccatgctccagaggtagaggatgacacattggaacgcaaaagactcaccaagata
tccgatccggagaagtgggaaatcaaacagatgattgctgccaatgtgttgtctaaggag
gaattcccagactttgatgaagagacaggaattctgcctaaagttgatgatgaggaggat
gaggacttggagattgagctggtggaagaggaacctccattcctgagggggcacaccaaa
caaagcatggacatgagtcctgtcaagattgtcaagaaccccgatggatctctctcccaa
gcagccatgatgcagagtgccctggccaaagagcgacgggaggtgaaacaggcccagcgg
gaggctgaaatggactcgatacccacgggccttaacaaacactgggtggacccactgcct
gacaccgacggcaggcagatagctgccaacatgaggggcataggtatgatgcccaacgac
atcccagaatggaagaaacacgcctttggtggcaacaaggcgtcctatggaaaaaagact
caactttctattctagagcaaagagagagtcttcctatctacaagctgaaagagcagctc
attcaggctgtccatgacaaccagatcctgattgtgatcggtgagacgggctcagggaag
accactcagatcactcagtacctggctgaggctggatacaccacacgagggaagatcggg
tgcacacaacccagaagagtggcagccatgtctgtggctaaaagagtgtcggaggagtac
ggttgttgtttaggtcaagaggttggatacaccatccgttttgaggactgcacaagtccc
gagactgtcattaagtacatgacggacggtatgctgttaagagagtgtctgattgaccct
gatctgggccagtatgcaatcattatgttggatgaggcccatgagagaaccattcacaca
gacgtgctctttggcctgctcaagaagactgtacagaagcgaactgacatgaagctcatt
gcaatgggcatcaatgacctattgtcatttgatttcatggatgctccgcccatggagacg
ctcatcacggccatggagcagctgtacactctaggatcgttggatgatgaaggtttgctc
acacgcctcggtcgtagaatggctgagtttcctctggagcccatgctttgtaagatgttg
atcatgtccgtccatcttggctgtagcgaagagatgctgaccatagtgtcaatgctctca
gtacagaatgtcttctatagaccaaaggacaaacaagctctggcagaccagaagaaggct
aagtttcaccagcctgagggggaccacctgactttgttggctgtctacaactcctggaag
aacaacaagttttccaacccctggtgctacgaaaacttcatccaggcgcgatctctccgt
cgtgcgcaggatatccgcaaacagatgctgggcatcatggatagacacaagctggatgtg
gtatcatgcggtaaagccacagtacgtgtacagaaagccatctgcagtggtttcttccga
aatgcagccaaaaaagaccctcaagaaggttacaggaccctcatagaccagcaggtggtc
tacatccacccctctagtgcgttgttcaatcgccaaccagaatgggtggtgtatcatgag
cttgtgctgaccactaaagagtacatgagggaggtgaccaccattgacccaaggtggctt
gtagaattttctccagcattcttcaaagtctctgatcccacacgcctcagcaagcagaag
aaacagcagcggttggagcccctctacaaccgctacgaggaaccaaatgcctggagaata
tccagagccttcagacgacgctag
DBGET
integrated database retrieval system
