KEGG   Sinocyclocheilus rhinocerous: 107743802
Entry
107743802         CDS       T04916                                 
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4-like
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
srx  Sinocyclocheilus rhinocerous
Pathway
srx03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:srx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107743802
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:srx03041]
    107743802
Spliceosome [BR:srx03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    107743802
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_EML PRP4 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th NBCH_WD40 Beta-prop_DCAF4 Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_Vps41 Beta-prop_IFT140_1st eIF2A Ge1_WD40 WD40_like Beta-prop_DCAF12 Beta-prop_SPT8 WD_LRWD1 Beta-prop_WDR35_TULP_N Beta-prop_WDR11_1st
Other DBs
NCBI-GeneID: 107743802
NCBI-ProteinID: XP_016412695
UniProt: A0A673M3L5
LinkDB
Position
Unknown
AA seq 507 aa
MSDEDEAPVVKKARIFYGSLEEKEKQRLSREGISTAAKDAVKAGIEAGHINISSGESMEM
EERVSERQAEVLAEFERRKRARQITVSTDDVEVKACLRALGEPITLFGEGPAERRERLRN
ILSVVGPDALKKSKKEDEKAKRTQDEYQQTWYHEGPSSLKEARIWLAKYSLPRAVERLDA
ARAQKEIPESTRTVKQQELHKTLRNVNNFCSQIGDDRPISHCQFSPNSELLVTASWSGLC
KLWKVPDCTLIRTLRGHNTNVGAISFHPQATLTLEESDVNMASCAADGSVKLWSLDSDEP
VADIEGHSMRVARVAWHPSGRFLGTTCYDNSWRLWDLEAQEEILHQEGHSKGVHDLHFHP
DGSLAGTGGLDAFARVWDLRTGRCIMFLEGHHNEIYSINFSPNGFHVATGSGDNTCKVWD
LRHRRCMYTIPAHENLVSSVKFQPNDGHFLLTGAYDNTAKVWTHPGWSPLKTLAGHEGKV
MGLDLSPDGQLIATCSYDRTFKLWMAE
NT seq 1524 nt   +upstreamnt  +downstreamnt
atgtcggatgaagacgaagctccagttgtgaaaaaggccaggatcttctatggaagcctt
gaagaaaaggagaagcagcgtctcagccgtgaaggaatatctaccgctgctaaagatgct
gttaaagctggcattgaggctggacatattaatatctccagtggtgagtcgatggagatg
gaggagcgtgtgagtgagcgacaagctgaagtgctggcagagtttgagcgtagaaagcga
gcgagacaaatcacggtctctactgatgatgtagaggtcaaggcctgcctccgagctctt
ggcgagccaatcacgctgtttggggaggggcctgcagagagacgagagagattgaggaac
attctttcagtagttggtcctgatgccttgaagaaatcaaagaaagaggatgaaaaagca
aaacggactcaagatgagtatcagcagacatggtaccatgaaggaccttcatctctaaaa
gaggcgcgcatttggttagccaagtattccctacccagagcagtggaaaggttagatgct
gcaagggcacaaaaagagattccagagtctacgagaacagttaaacagcaagagcttcac
aagaccctacggaatgtgaataacttctgcagccaaattggtgatgaccgtccaatatct
cactgccagtttagccccaactctgagttgcttgtgactgcatcatggagtggcttgtgt
aaattgtggaaagtcccagattgtacacttatacgcacattaagaggtcacaataccaac
gtgggagcgattagctttcaccctcaagccacactcacacttgaggagtcagatgtcaat
atggcctcctgtgctgcggatggatctgttaagctgtggagtttagacagtgatgagcct
gtagcagacattgaggggcactctatgagggtggctcgggtggcctggcatccctctggg
cggttcctaggaacaacttgctatgataactcatggcgactttgggatctggaagcccaa
gaagaaattctgcatcaggagggtcatagtaaaggtgtccatgacctgcacttccaccca
gatggctctctggcaggaactggtggtttggatgcatttgctcgtgtctgggacctgcgg
actggtcgttgtatcatgttcctggaaggccaccacaacgagatttatagcatcaatttc
tccccaaacggctttcacgtggcaacaggaagtggagataacacctgtaaagtgtgggac
cttcgtcatagaaggtgtatgtacacaattcctgcccatgagaaccttgtgtcttcagtc
aagttccaacctaacgatgggcattttttgctgactggtgcatatgacaacacagccaaa
gtgtggacccatcctggctggtcacctctgaagactctggcgggtcatgaagggaaggtc
atggggcttgacctttcgcctgatggacagctcattgccacctgctcttatgaccgaacc
ttcaaactctggatggcggaatga

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