Sinocyclocheilus rhinocerous: 107743977
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Entry
107743977 CDS
T04916
Name
(RefSeq) hypoxia-inducible factor 1-alpha-like
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04137
Mitophagy - animal
srx04140
Autophagy - animal
srx04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107743977
04137 Mitophagy - animal
107743977
04148 Efferocytosis
107743977
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srx03000
]
107743977
Transcription factors [BR:
srx03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
107743977
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
HLH
Rbsn
Cas_Csn2
Motif
Other DBs
NCBI-GeneID:
107743977
NCBI-ProteinID:
XP_016412925
UniProt:
A0A673N449
LinkDB
All DBs
Position
Unknown
AA seq
772 aa
AA seq
DB search
MDTGVVTEKKRVSSERRKEKSRDAARSRRGKESEVFYELAQKLPLPHNVTSHLDKASIMR
LTISYLRMRKLLSSDDSEKENELESQLNSFYLKALEGFLMVLSEDGDMVYLSENVGKSMG
LTQFDLTGHSIFEFSHPCDHEELREMLVHRTGSKKTKEQNTERSFFLRMKCTLTSRGRTV
NIKSATWKVLHCAGHVRVQERGEGLGDSGFKEPPLTYLVLICEPIPHPSNIEVPLDSKTF
LSRHTLDMKFSYCDERITELMGYEPDDLLNRSVYEYYHALDSDHLTKTHHNLFAKGQATT
GQYRMLAKKGGFVWVETQATVIYNPKNSQPQCIVCVNYVLSGIVEGDVVLSLQQTMTEPK
AEEKENQEMEDKASEVDILKLFKPESLKCPMESPDLYDKLKEEPEALTVLAPAAGDTIIS
LDFNNSDSDMQLLKEVPLYNDVMLPSSSEKLPISLSPLTPSDSGPDLNKLETGAEDFPFS
SASDRGPDSTNTPSTSGLGSSGPNSPMDYCFQVDSDNSSEFKLDLVEKLFAIDTETKTPF
SSQAMEDLDLEMLAPFIPMDDDFQLRIPSPLDPLPSGPHSVSAMSSLFQPLPSPASPASS
SSSTVKPSSRAPSPLHLLQEVCNAPVSPFSGSRDISPARSPTPQSSNQLNNRKLSPKMLA
IQNAQRKRKLEEVTSLSEAVGLSALLQSVDSAIEPGKRAKVLELKGSSVLGGNKTILILP
SDVASRLLCSSLESSGGLPTLTRYDCEVNAPVQDRQHLLQGEELLHALDQVN
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggatactggagttgtcactgaaaagaaaagggtgagctcggagcgcaggaaggagaag
tccagggatgcagcgcgatctcgcaggggaaaggagtccgaggtgttctacgagttagca
caaaaactccccctgccacacaatgtcacctcccacctggacaaagcctccatcatgagg
ctgaccatcagctatctgcgcatgaggaagctgctcagctctgatgattcagagaaggag
aatgagctggagagtcagctgaacagtttttatctgaaggccctggagggtttcctcatg
gtcctgtctgaagatggagacatggtttatctctctgagaatgtcggcaagagcatgggc
ctcacacagtttgatctgactggtcacagcatctttgaattttcacacccatgtgaccat
gaggagctgagagagatgctggtccacaggacaggatccaaaaagaccaaggaacaaaac
acagagcgcagcttcttcctgcgcatgaagtgcacactcactagcagagggcgcactgtc
aatatcaagtctgctacgtggaaggttcttcactgcgctggtcatgtgcgtgtgcaggag
cgcggcgagggtttgggagactctggctttaaagagcctcctctgacctaccttgtgctc
atctgtgagcccattcctcatccctcgaacatcgaggtgcctctggacagcaagactttc
cttagccgccacactctggacatgaagttttcgtactgtgatgaaaggatcacagagctg
atgggatatgagccagatgatctgctgaacaggtctgtgtacgaatactatcatgccctg
gattcagatcaccttaccaagacacatcacaacttgttcgcaaagggccaggccaccact
ggccagtaccgtatgctggctaagaaaggtggttttgtgtgggtggagactcaggccacc
gttatctacaaccccaagaattctcagccacagtgcattgtgtgcgtcaactacgttctc
agtggcattgtggagggggacgttgtcctgtccctgcagcagaccatgaccgagcccaag
gctgaggagaaagagaaccaggagatggaagataaggcctccgaggtggacatactcaaa
ctcttcaagccagaaagccttaagtgtcccatggagagccctgacctgtatgataagctg
aaagaggagcctgaggctctcaccgtgttggcacctgctgcaggagacaccatcatctct
ctggacttcaacaactcagattctgacatgcagctgctgaaggaggtgcccctctacaat
gatgtcatgctgccctccagcagcgagaagctgcccatcagtctgtctcctctgacgccc
agcgactccggcccagatctgaacaaactagagaccggagcggaggacttccctttcagc
tctgcctctgatcgtggtccagactccacaaacacaccttccacatctggactgggctcc
tcggggcccaacagccccatggattactgtttccaagtagactcagacaacagttctgaa
ttcaaactggacctggttgagaaactgtttgctattgataccgagacaaagacccctttt
agctcccaggccatggaggatctcgacctagagatgctggctccattcatcccaatggat
gacgacttccagctgcgcatcccctctccgctggatccgctcccctctggccctcactct
gtgtcagccatgagctccctgttccagcccttaccatcccctgcgtctccagcctcttcc
tccagcagcacagtgaaaccgtcatctcgggccccttcgcccctgcacctgctgcaggag
gtgtgcaatgcccctgtctcacccttcagtggaagtcgggacatttcccctgctcggtcc
cccaccccacagagcagcaatcagctcaacaacagaaagctgtctccaaagatgttagct
atccagaacgcccaacgtaagaggaagctggaggaagtgacatcactttctgaggctgtt
ggactgagtgctttgcttcagagtgtggacagtgctatagagcctggaaagagggcaaag
gttttagagcttaaaggatcgagtgtgcttggaggaaacaaaaccattctcatactgccc
tctgatgtggccagtcgtctgttgtgcagttctttagagagcagcggtgggctgcctacg
ctaacacgttatgactgtgaagtcaacgctcccgtgcaggaccgccaacatctgctgcag
ggagaggagctcctgcatgctctggaccaagtcaactga
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