Sinocyclocheilus rhinocerous: 107743978
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Entry
107743978 CDS
T04916
Name
(RefSeq) homeobox protein SIX4-like
KO
K15615
homeobox protein SIX4
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srx03000
]
107743978
Transcription factors [BR:
srx03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
107743978
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_TSHZ3
Motif
Other DBs
NCBI-GeneID:
107743978
NCBI-ProteinID:
XP_016412926
UniProt:
A0A673NHD1
LinkDB
All DBs
Position
Unknown
AA seq
610 aa
AA seq
DB search
MCCLKPRGVTYQDTLKMSSSSSEVFSADEIKRENRGSVKLSVLDPAELPMENAELLDCSP
ASLAFSPEQVACVCEALLQGGNVERLARFLWSLPQSDLLRGNESILKAQAIVAFHQARYQ
EFYCILENHSFSPPNHSSLQDMWYKARYIEAEKARGRPLGAVDKYRLRRKYPLPRTIWDG
EETVYCFKERSRNALKDMYKRNRYPSPAEKRNMAKMTGLSLTQVSNWFKNRRQRDRNPSE
AQSKSESDGNHSTEDESSKGQEDLSPRPLSSGSSSSVAHGTAPPTVYSDGGTTVIQQIGD
VKMPAHLAGGMSFNGDLANVNAHYINGGAYVQSHSSNALLNGLGATSGHFLTFDPQRVSH
HSQERLLGGSCVSYAPFSMGVSETASGKLEAMQTLVSNAEDGVISSAVSFASAPSTPSTT
SGGLHLSSYSVVNLPGSETTMGLPPLMLLPSTTSSTHGSAPLGNVVSDSQTLLYTQTVKQ
EPLDVSGSYTYPSEMPLDQGSNLGYTASLFLSSSSTGGSLPPTVTATVTSALLGTEVHHT
LNQAGSGIQEDSVALSSDYRSQDVQLPNSLQVVSRAGEGPVRVVCGDLDMEGKELAKLQT
VQMDDDGSDL
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgtgctgcctgaaacccagaggagtgacttatcaggacacgctcaaaatgtcttcttcc
tcaagcgaggtctttagtgccgatgagatcaagagggagaatcgtgggagtgtcaagctg
tcagtgctggaccccgcggagttgccgatggagaatgccgaacttttggactgctcaccg
gcctccctggccttctcccccgagcaggtcgcatgcgtctgcgaagcgctgctgcagggt
gggaacgtggagcgcctggccaggttcctctggtcactgccgcagagtgacctgctgcgg
gggaacgagagcatcctgaaagcgcaagcgatagtcgcgtttcaccaggcccgctaccaa
gagttctactgcattctggagaaccacagtttcagtccgccaaaccactcgtctctgcag
gatatgtggtacaaggcgcgctacatcgaagcggagaaggcgcggggcagaccgctgggt
gccgtggacaagtatcgcttacgcaggaaatatccgctgcctcggactatctgggacgga
gaggagaccgtgtattgtttcaaagagaggtctaggaacgcgctgaaggatatgtacaag
cggaaccggtacccatctccagccgagaaacgaaatatggccaaaatgacaggactttct
ttgacgcaggtcagcaactggttcaaaaacaggaggcagagagacagaaatccatccgag
gcgcagtcaaaaagtgagtcagatggcaatcacagtacagaagatgagtccagtaaaggc
caggaggacttgtcaccacgtcccctctctagcggctcttctagctcagtcgcacacgga
acagccccccctacagtttactcggatggaggaaccacagtcatccaacaaattggagat
gtcaaaatgcctgcacacctagctggaggaatgagttttaacggtgatctagcaaatgtg
aatgctcactacatcaacggtggagcctatgttcagtcacacagtagcaatgctctcctg
aatggacttggcgccacgagtggtcatttcttgacctttgatccccagagggtctcccat
cacagtcaggagaggctgttaggtgggtcttgtgtgtcttatgctccgttctcaatgggg
gtttctgaaactgcctctggaaagctggaggccatgcagactctggtttccaatgctgaa
gatggagtcatttcttcagcggtctccttcgcttcggccccctccactccatccactacc
tcaggaggccttcatctcagcagttacagtgtggtcaatctccctggaagtgaaaccacc
atggggcttcctcctttaatgctgctcccatccacaacatcgtccactcacggctctgct
cctttggggaacgtggtcagtgactcccaaaccctgctttacacccagactgtgaagcag
gagcctttggatgtgtctggaagctacacttatccttctgaaatgcccctggaccaaggc
agcaacctgggttacacagcctcccttttcctttcttcttcctctaccggtggttcactt
ccccctaccgtcacagcaacggtcacctctgcccttttgggcaccgaggtacaccacact
ctgaatcaagctggaagtggcatccaagaggacagtgtagccctgtcttcagactacagg
tctcaagatgttcagctgcccaacagcctgcaagttgtgtctagggcaggagaaggccca
gtcagggttgtttgtggggatctggacatggaagggaaagagctggccaagctgcagact
gtacagatggacgatgatggaagtgacctatga
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