Sinocyclocheilus rhinocerous: 107744160
Help
Entry
107744160 CDS
T04916
Name
(RefSeq) DEP domain-containing protein 5-like
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
107744160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
srx04131
]
107744160
Membrane trafficking [BR:
srx04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
107744160
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
DEP
Motif
Other DBs
NCBI-GeneID:
107744160
NCBI-ProteinID:
XP_016413154
LinkDB
All DBs
Position
Unknown
AA seq
1425 aa
AA seq
DB search
MWRLKKSLVSTCAYVTQKVEFAGIRAQASELWVKGEKVTCGYISEDTRVVFRSTSAMVYI
FIQMSCEMWDFDIYGDLYFEKAVNGFLSDLFAKWKEKNCSHEVTVVLFSRTFYSAKSLEE
FPELQRASVRQDHEGHYYEDFYRVVAQNERRDEWTSLLITIKKLFIQYPVLVRLKGADGF
LCGHNSTAAQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGEGVFEVDRLLMILT
KQRMIDNGIGVDLVCMGEQPLHAVPLFKLHNRTVHGDSRIGDDYNLPHWINHSFYTSKSQ
NSCSCFTPRIKLAGKKAHAEKAKSSKEHSLGAPKDAENSLPIQVDYDAYDAQVFRLPGPS
RAQRSTNFRSSRERESASRKSWGSADVGGGVVGSSPPTRPTGPEEQRSLASDDSLSHISN
ILLIPRPAQGQYEVSSSLGYTSCTRELLEKMVESQRDSSAPGRFTVGSAESTLHIRPGGY
TPQRALINPFAPSRMPMKLTSNRRRWMHTFPVGPSGEAIQIHHQTRQNMAELQGSEQRDP
ARTSAELLELAYHEATGSKRTASRYAGENGLYITGVPDNVSGSPASSNSTGTPVNRGSFE
DYSSPDPMPSFCCTVGVDWKSLTTPACLPLTTDYFPDRQTLQNDYTEGCYDLLPHTDLER
RDDESPVMTAHQVFEEFICQRLMQGYQIIVQSNRKPQPAIAPPLSSSPLYSRGLVSRRKP
EEEESVYWLSMGRTFHKVCLKDKIITVTRYLPKYPYESTQIQYSYNLCPPHADAHFLPFW
VEFSHERLEEYKWNYLDQYICSAGSEDFSLIDSLKFWRTRFLLLPAGGARRVADGEGHWD
VYGEGMGAGRDGLSGTGDWFLLDGFIRFLEGLNRIRRRHRSDRIIRKGATIKGLQVTGAL
SSYNPEPIAPPVGKKGTSALSALLELDQTQKSLEEQQLAAQHGGKSCGPFSEAASVALTT
TYVDSPRKDAAFILDFIRSPRSSYICHSQLPAEQVSANHIEGGLLDKGGNQPTSATSQAT
GDPTPGTGAETGGQSGSSGLSLSSSSTLMEILEAIKHPTTGVQLLPEQRGLPPNCFVSAE
VVHWLVSTVENVATQGIAVEIMQKMLDEGLITHASGDAMRTFVYGFYLYRIVEKDNEKGP
TTQLPPAGANVWSAAALEDFALFQRKWFEVAFVMEERRPCDLPAFLLPWLPSRPASYASR
HSSFSRSFGGRSQAAALLAATVPEQKTVTLDVDVNNRSDRTEWCSCYYHGNFSLNAAFEI
KLHWMAVTAAVLFEMVQGWHRKAASCGFLLVPVLEVPFALSSYLYGDPLRAQLFIPLNIQ
CLLKESCDNLFEGFEPETYWERMQLFQEAILSRFGFVQDKFSASAFNFPSENKPQYIHVT
GTVFLQLPYSKRKYSSGQRRRRNSATSTNQSLFGSEERVVDTVSH
NT seq
4278 nt
NT seq
+upstream
nt +downstream
nt
atgtggagactgaagaagagcttagtgagcacatgtgcgtatgtgacacagaaagtagag
tttgcagggatcagggcccaggccagtgaattgtgggtaaaaggagagaaggtcacttgt
ggctacattagtgaagatacaagggtggtgtttcggtccacctctgccatggtttatata
ttcattcagatgagctgtgagatgtgggactttgatatctatggtgatctttactttgag
aaagctgtcaatggtttcctctcagatctgtttgctaaatggaaagagaagaactgcagc
catgaggttacagtggtgttgttctctcgtaccttctactctgccaaatcactggaagag
ttcccagagctccaaagagcatcagtccgacaagaccacgagggacattattatgaggat
ttctacagggtggtggcccagaatgaaaggcgtgatgagtggacatctctgctcatcacc
attaaaaaactcttcatacaatatcctgtgctcgtgcgtcttaaaggagcagatggattc
ctgtgcgggcacaattccactgctgctcagggaaattatctggaagctatcaacttgtct
ttcaatgtctttgataagcactacatcaaccgtaactttgaccgtacgggccagatgtca
gtggtcattactccaggagagggtgtgttcgaggtggaccgcttgctcatgatcctcacc
aaacagcgcatgattgacaacggcatcggtgtcgatctggtatgcatgggagagcagcca
ctccacgctgttccactcttcaagttacataaccgcacagtgcatggagactctagaatt
ggtgatgactacaatcttcctcactggatcaaccacagcttttacacatcaaagagccag
aactcatgcagctgttttacaccacggatcaagctggctggaaaaaaggctcatgctgag
aaagctaaaagcagcaaagaacactctcttggtgcaccaaaagatgctgagaacagccta
ccgatccaggtggactatgatgcgtatgatgctcaggtcttcaggcttcctggaccttcc
agagcccagaggtccaccaacttcaggtcgagtcgggagagggagtcagccagcaggaaa
agttggggctcagcagatgttggtggaggtgtagtgggcagctctcccccaaccaggcct
acaggaccagaagaacagaggagcctggcatcagatgacagtctgagccacatctccaac
atcctgctcatcccacgcccggctcagggccaatacgaggtcagcagctccctggggtac
accagctgcacaagagaattgctagaaaagatggtagaatcccagagggactccagtgct
ccgggccgcttcacggtgggaagcgctgagtccaccctacacatacggcctggcggttac
acgccgcagagggccctcatcaacccgttcgccccctcacgcatgccaatgaaactcacc
tccaaccgtcgccgctggatgcacacatttcctgtgggtccttctggagaggcaatccag
atccaccatcagacgcgacagaacatggcagagctgcagggtagtgagcagagagatccg
gctcgtacctccgccgaactgctggaactggcctatcacgaagctacgggaagcaagcgg
accgcatcccgttatgcaggagagaatggactgtatatcacgggagttcctgataatgtc
tccggaagcccagctagtagcaacagcactggaacaccagtgaaccgtggttcctttgag
gattactccagtccagatccgatgcctagtttctgctgcacggttggggtggactggaag
tccctcaccactcccgcctgcctcccgctcaccaccgattactttcccgaccgccaaacc
ctgcagaatgactacacagagggctgctacgacctgctgccacacactgacctggagaga
cgtgatgatgagtctccagtgatgacggctcatcaggtgtttgaagagttcatctgtcaa
cgactgatgcaaggctaccagatcattgtacagtctaacaggaagccacagccggctata
gccccgcccctcagcagcagtcccctttattcccgagggctggtgtctcgacgcaaacca
gaggaggaggagagtgtttactggctcagtatgggaagaacctttcataaagtctgcctt
aaagataagatcattaccgtcacccgttacctcccaaagtatccctatgaatccacacag
attcagtacagctacaatctgtgccctccacatgcagacgcccacttccttccattttgg
gtggagttcagccacgagcggctggaggagtacaaatggaactacctggaccagtacatc
tgctctgctggttcagaggacttcagtcttattgactctctgaagttctggcgcacgcgc
ttcttgctgctgccagcgggcggtgccaggcgagtggcggatggggagggtcactgggac
gtgtatggggagggaatgggggcagggcgggatggcctctctggcactggcgactggttt
cttttagacggatttatccgctttttggaaggcctgaacaggattcgtcgccgtcaccga
tctgatcgaattatccgcaaaggagctaccattaaaggcctgcaggtgacaggagccctc
tcatcctacaacccggagcctatagcgccccctgtgggcaaaaaaggcacctctgccctc
tctgcactcctggagctggatcagacacagaagagtttagaagagcagcagcttgctgct
cagcatggtgggaaatcatgtggacctttcagtgaagctgccagcgttgccctaacaacc
acctatgtcgatagcccccgtaaggatgctgccttcattttggactttattcgtagtcca
cgttcctcctacatctgtcactctcagctaccagctgaacaggtttcagcaaatcacata
gagggagggttgttggacaaaggaggcaaccaaccaacatcagctacatcccaagccaca
ggagacccaaccccaggcactggtgcagagactggcgggcagtcaggatccagtggattg
agtctttcctcatcttccactctaatggagatcctggaagccattaagcatcccaccact
ggagtgcagcttttgccagagcagaggggcctgcctcccaactgctttgtcagtgctgag
gttgtacattggctggtcagcactgtggagaatgttgccacacaaggcattgcagtagaa
atcatgcagaaaatgctggatgaaggtctaattacgcatgcctctggtgatgccatgcga
acgtttgtctatgggttctacctctaccggattgtcgaaaaagacaatgagaagggccct
acgactcagctgcccccagcaggagccaatgtatggtctgccgcagctttggaggacttc
gccctgttccagaggaagtggtttgaggtggcctttgttatggaggaacgtcggccctgt
gacttacctgccttcctcctgccctggttgcccagccggccagcctcgtatgcaagtagg
catagctccttcagccgcagcttcggaggacgcagccaagctgctgcactgctagctgcc
acggttccagagcagaaaacagtcaccttggacgttgatgtgaacaatcgcagtgatcgg
actgaatggtgcagttgctattaccatggcaacttctccctcaacgctgcttttgaaatc
aagctgcactggatggctgttactgcagccgtactctttgaaatggtgcaaggctggcac
agaaaggcagcatcttgtggattcctgcttgtacctgtattggaggtgccctttgctttg
tcatcgtacctatatggtgaccctctccgtgctcaattgtttatccccctaaatatccag
tgcctgctaaaggagagctgtgataacctgtttgaggggtttgagccagagacatactgg
gaaagaatgcagttgtttcaggaggccatactctccagatttggctttgttcaggacaaa
ttctcagcatcagcttttaactttccatcagagaacaaacctcaatacatccatgtaaca
ggtacagtttttcttcagctgccttactcaaaaaggaaatactccagtggacagcggcgg
cgccgtaactctgctacctccaccaatcaaagcctgtttggttctgaggagcgagtggtg
gatactgtcagtcactaa
DBGET
integrated database retrieval system
