Sinocyclocheilus rhinocerous: 107744239
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Entry
107744239 CDS
T04916
Name
(RefSeq) probable inactive glycosyltransferase 25 family member 3
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx00310
Lysine degradation
srx00514
Other types of O-glycan biosynthesis
srx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
107744239
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
107744239
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
srx01003
]
107744239
Enzymes [BR:
srx01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
107744239
Glycosyltransferases [BR:
srx01003
]
O-Glycan biosynthesis
O-linked Gal type
107744239
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_25
Anp1
Glyco_tranf_2_4
Motif
Other DBs
NCBI-GeneID:
107744239
NCBI-ProteinID:
XP_016413254
UniProt:
A0A673HWR4
LinkDB
All DBs
Position
Unknown
AA seq
591 aa
AA seq
DB search
MLSWIISVWTILVVAQCYFSEENYTEESKMHPPTVVLAIIARNAAHSLPYYLGALERLNY
PKERISIWAATDHNIDNTTAILQEWLTVMQTQYHYIEWRPLDEPTSYVGEPGPKHWTNGR
YEYVMKLKQAALNFAKKRWADYILYSDTDNILTNPDTLHLLMAENKSVIAPMLDSQSAYS
NYWCGITPQGYYRRTAEYFPTKQRQRLGCYPVPMVHSTILLDLRKEGTKKVSFHPPHKDY
SWPFDDIIVFAFSCRISEVQMFLCNKERYGYLNVPAKPHQTVEDDRINFVHLYLDSLIHG
PPMYLSRYVHVPPKQSDHMGFDEIYLINLRRRPDRRDRMLWSLYELEIDAKVVDAVDGAA
LNSSDIKILGVDLLPGYYDPFSGRTLTKGEVGCFLSHYHIWKEMVDMQLDKVLIFEDDVR
FQANFKRRLMRLVEEVEQVELDWDIIYLGRKKVNPEEEVAVENVRNLVYADYSYWTLSYA
ISLQGAQKLLNAEPISKMLPVDEFLPIMYDKHPNEDYKSHFPNRNLMAYSTHPLLVQPCH
HAGDPEWVSDTETSTLWDDDNVRTDWRGSHKTLKGSQPPAGLQSATYKDEL
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgttatcttggatcataagtgtttggaccattcttgtggtagcacaatgttacttttca
gaggaaaattataccgaagagtcaaagatgcatccgcccacggtcgttctagctataatc
gcacggaacgccgctcattctttaccctactacctcggagctctcgagagattaaactat
cccaaagagcgcatctctatctgggcagcgacagaccacaacattgacaatacaacagca
atcctgcaagaatggctcactgtcatgcaaacacaatatcactatattgagtggagacct
ttagatgaacccacgtcctatgtaggtgagccgggacccaagcactggactaacggccgc
tatgagtatgttatgaaactcaaacaggcagcgctgaactttgccaagaaacgctgggct
gactatattctgtattcagacacagacaacattttgactaacccggacacactgcatcta
ctgatggcggaaaacaagtcagtcattgcccccatgctggactcacagtcagcgtactcc
aactactggtgtggcatcactccacagggatactatcgtcgtactgctgagtactttccc
acaaaacagcgtcaaaggctgggctgctacccggtgccgatggtccactccactattctg
ctggacttgcgcaaagaaggcaccaagaaagtgtcctttcacccccctcacaaagactac
tcctggccctttgacgacatcatcgtttttgccttctcctgccgaatatcagaggttcag
atgtttctgtgcaacaaggagcgttatgggtatctgaacgtacctgcaaagcctcatcag
accgtggaggatgatcgaatcaattttgtccacctttacctggactctttgatccatggg
ccgccaatgtacttgtctcgctatgtccacgttcctcccaaacagtctgatcacatgggc
tttgatgagatctacttgataaacctgcgcagacgtccagaccgcagggacaggatgtta
tggtcgctttatgagctagagattgatgccaaagttgtggatgctgtagatggagcagct
ctgaacagcagcgatattaagattctaggtgtcgatctcttacctggttactacgaccct
ttctccggccgcacgctgaccaagggagaggtgggctgcttcctcagccactaccacatc
tggaaagagatggtagatatgcagctagacaaggtgctgatctttgaggacgacgtgcgt
ttccaagccaactttaaacgtcgcctgatgcggctggtggaggaggtggagcaggtggag
ctggactgggacatcatatacctgggcaggaagaaggtgaaccctgaagaggaagttgca
gtggagaatgtgaggaacctggtgtacgctgattactcctactggacgctgtcttacgcc
atctctcttcaaggagctcagaagctcctgaacgccgaaccgatatccaagatgcttcct
gtggatgagtttctacccatcatgtatgacaagcaccccaatgaggactacaaatcccat
tttcccaatcggaatctgatggcgtattccacacacccccttctggtgcagccctgccat
cacgccggggacccggagtgggtgagcgacacagagacgtctacgctgtgggatgatgac
aatgtgcgcacggactggaggggctcgcataaaactctcaagggttctcagccaccggcc
ggcctgcagagcgccacctacaaggacgagttgtga
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