Sinocyclocheilus rhinocerous: 107744326
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Entry
107744326 CDS
T04916
Name
(RefSeq) nuclear pore complex protein Nup88-like
KO
K14318
nuclear pore complex protein Nup88
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107744326
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srx03019
]
107744326
Messenger RNA biogenesis [BR:
srx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107744326
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup88
HTH_32
Motif
Other DBs
NCBI-GeneID:
107744326
NCBI-ProteinID:
XP_016413389
LinkDB
All DBs
Position
Unknown
AA seq
623 aa
AA seq
DB search
MASFAGDRWREALKNHDIFSKLQERLHLEPQGTSKRIAKNLTFCLNGDLFIWDSVESVFY
TTNLRQLNTDGDTDTSKYQTLLCINPPLFEVCQVLVSPAQYHVALIGQRGATILELPQRW
GKRSEFESGRVQINCKTIPVAERFFTSSPSVTLRQAAWYPSETEEPHLVFLTSDNTIRLY
NLKEPQSPAKVLSVSQVDEESIVHTRGRSYAASLGETAVAFDFGPLADSPHLSGLRIKAE
LLVYPLYILYGNGETFLSYISLTHSVSNLGKPMGPLPMYPAAEDNYGYDACAVLCLPCVP
NILVIATESGMLYHCVVLEAEEEEDGGAVERWSRGSETVPSLYVFECVELELTLKLAAGE
EEEEITESDFTCPIRLHRDPLCQHRYHCTHEAGVHSVGLIWFKKLHKFLESDEEDKDSLQ
ELAAEQRCIVEHILCTRPLANSLPAPVRGFWIVSDLSLGATMICITSTYECLLLPLLSSI
RPPSPPLLCSHPGAGSGSSPLRGLAEDSFEQHIRNILARSSTNPLMLRAGDKDSSPPPPE
CLQLLSRATQVFREEYILKLGLAHEEMQRRVKLLTSQKNKQLEDLALCREERKSLREAAE
RLADKYEDAKYHQEAIMNRFTFL
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgttcgcgggagatcgctggagggaagcgctgaagaaccacgatattttcagt
aaattacaagaaaggcttcatttagagcctcaggggacaagcaaaagaatagccaagaac
cttacgttttgtctgaacggtgacctattcatatgggacagtgttgagagtgtgttttac
accacaaacctgcgacagctgaacaccgacggcgacacagacacttctaaataccagact
ctgctgtgcatcaacccgccgctgtttgaggtgtgtcaggtgctcgtcagccccgcgcag
tatcacgtggctctcatcggtcagcggggagcgactatactggagctgcctcagcgctgg
ggcaagaggtcagagttcgagagtggccgcgtccagatcaactgcaagacgattcctgtg
gctgaacgtttcttcactagttctccctctgtgacactccgacaggctgcctggtatccc
agcgaaactgaggagcctcatctggtttttctgacctcagataacaccatcagactttac
aatcttaaggagccacagtcccccgccaaagttttatctgtgtctcaggtagacgaggaa
agcattgttcatacaagaggacgctcctatgcagcatctctgggggagacggctgtggca
tttgacttcggaccgctggcggattctcctcatctgagcggtctgcgtataaaggcagag
ctgctggtgtatccactgtacattctgtatgggaatggagagacgtttctgagctatatt
tctctcacacacagtgtcagtaatttagggaagccgatgggcccattacccatgtacccc
gcagcagaagataactatggctatgacgcgtgtgctgtgctctgcctgccttgtgtgcca
aacatcctggttattgccactgaatcaggaatgctgtaccactgtgtggtgctggaggca
gaggaagaggaggatggcggagctgtagagagatggtccagaggctcagagacggtgcct
tcgctttatgtgtttgagtgtgtggagctggaactgacactcaaactggctgctggggag
gaggaagaggagattacagagtcagatttcacctgtccaatcagattacaccgagaccct
ctgtgtcagcacaggtaccactgcacacatgaggccggtgtacacagtgtaggactcatc
tggttcaaaaaactacacaagtttctggagtctgatgaggaggataaagacagtctgcag
gagctggcagcagagcagcgctgcatagtggagcacatcctgtgcaccagacctctcgct
aacagtttgccggctcctgttcgtgggttttggatagtgtcagacctgtccctgggagcc
accatgatctgcatcacgagtacctacgagtgtctcctgctccctctgctaagctctatt
cgtccaccgtcccctccattgctctgctctcatccgggggcggggtcaggaagctctcct
ctgcgtggattggctgaagactcctttgaacagcatattcgcaacatcctggcacgcagc
tcaaccaatccattaatgctgagggcgggtgataaggactcgtctcctcctcctccagaa
tgtctgcagctgttgagcagagccacacaagtgttcagagaggagtacatcctcaaactg
ggcctggctcatgaagaaatgcagagaagagtaaagctcctgaccagccagaagaataag
cagctggaggatcttgctctttgtagagaagagagaaaaagcctgagggaggctgcggag
cggctggctgataaatatgaagatgccaagtatcatcaggaagccatcatgaacaggttc
acctttctttga
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