Sinocyclocheilus rhinocerous: 107744520
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Entry
107744520 CDS
T04916
Name
(RefSeq) transcription factor Sox-3
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srx03000
]
107744520
Transcription factors [BR:
srx03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
107744520
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Pico_P1A
PSMbeta
Motif
Other DBs
NCBI-GeneID:
107744520
NCBI-ProteinID:
XP_016413698
UniProt:
A0A673LHG2
LinkDB
All DBs
Position
Unknown
AA seq
300 aa
AA seq
DB search
MYNMMETEIKSPLPQSNTGSAAGGKNNSSSDQDRVKRPMNAFMVWSRGQRRKMAQENPKM
HNSEISKRLGADWKLLTDAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDKYS
LPGGLLAPGANAVSNAVSVGQRMDYTHMNGWTNSAYSLMQDQLAYSQHPSMNSPQIQQMH
RYDMAGLQYPMMSTAQTYMNAASTYSSMSPAYTQQTSSAMGLGSMASVCKTEPSSPPPAI
SSHSQRACLGDLRDMISMYLPPGGDSADHSSLQSSRLHSVHPHYQSAGTGVNGTLPLTHI
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggaaaccgagattaaaagcccccttccgcagtccaacacgggctcg
gcggcgggcggcaaaaacaacagctccagcgaccaggaccgggtgaagcggcctatgaat
gctttcatggtgtggtctcgcgggcagcggaggaagatggcacaagagaatcccaaaatg
cacaactctgagatcagcaagcgcctcggtgctgactggaaacttttgactgacgccgag
aagagacccttcattgacgaggccaagcgcttacgagccatgcacatgaaggagcacccg
gattacaaataccgtccccgcaggaagaccaagaccctgctgaagaaagacaagtattcc
ttgcccggaggactcttggcacctggtgccaacgctgtcagcaacgccgtgtcagtgggc
cagcggatggactacacacacatgaacggctggacgaacagcgcgtactccctcatgcag
gaccagctggcctactctcagcatcccagcatgaacagcccccagatccagcagatgcac
cggtacgacatggcgggacttcagtaccccatgatgtccacggcccagacctacatgaac
gccgcgtccacgtacagcagcatgtcaccagcatacacgcagcaaacttccagtgcaatg
ggtttgggctccatggcttcagtgtgcaagacggaacccagctctcctcctccggccata
agctctcattcccagcgtgcttgtttgggagacctgagggatatgataagcatgtacctg
ccccccggaggagacagcgccgaccactccagcctacagagcagtcggttacacagcgtt
cacccgcactatcaaagcgcagggactggcgtgaacggaacgctacccctaacccacatt
tga
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