Sinocyclocheilus rhinocerous: 107744621
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Entry
107744621 CDS
T04916
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04142
Lysosome
srx04144
Endocytosis
srx05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107744621
04142 Lysosome
107744621
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
107744621
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
srx04131
]
107744621
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
srx04147
]
107744621
Membrane trafficking [BR:
srx04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
107744621
Exosome [BR:
srx04147
]
Exosomal proteins
Proteins found in most exosomes
107744621
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Gp18_dom_I
Motif
Other DBs
NCBI-GeneID:
107744621
NCBI-ProteinID:
XP_016413896
LinkDB
All DBs
Position
Unknown
AA seq
1679 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMADPNT
PIRRPISADSAIMNPASKVIALKAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNSLA
LVTDNAVYHWSMEGDSQPVKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAAFGQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFIKKAVDVFFPPEAQNDFPVAMQISSKQDVVFLVTKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEATSGIIGVNRKGQVLSVCVEEENIIQYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNNLFAAGNYSEAAKVAANAPKGILRTPDTIRRFQGVPAQPGQTSPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQFPKIVLYAKKVGYTPDWIFLLRNVMRISPDQGLQFAQMLVQDE
EPLADITQIVDVFMEYNLVQQCTSFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTNYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNYFGALSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLTELFESFKSFEGLFYFLGSIVN
FSQDSEVHFKYIQAACKTGQIKEVERICRESNCYDPEHVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNHPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDQELINVCNENSLFKSLSRYLVRRRDPDLWVSVL
LETNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISSELFEEAFAIFRKFDVNTS
AVQVLIEHISNLDRAYEFAERCNEPAVWSQLAKAQLQKGLVKESIDSYIKADDPSAYMEV
VQVSSQSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWGELVFLYDKYEEYDNAIITMMS
HPTDAWKEGQFKDIITKVANVELYYKAIQFYLEFKPLLLNDLLIVLSPRLDHSRAVNFFS
KVKQLPLIKPYLRSVQNHNNKSVNEALNNLFISEEDYQALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMLYASESKDTELAEELLQWFLRE
DKKECFAACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMREYLSKVDKLDTSESLR
KEEEQATETQPIVYGTPQLMLTAGPSVPVPPQQAYGYGYTAAPGYPQAPQAQPGFGYGM
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaatcctgcctatcagattccaggagcacctgcagctccaaaatttggggatc
aacccagccaacatcgggttcagcaccctgacgatggagtctgataagttcatctgtatc
cgggagaaggttggagaacaggcacaggtggtgatcatcgacatggcggacccaaacacc
cccatccgcaggcccatctctgcagatagcgctatcatgaaccctgcgagcaaagtcatc
gcacttaaagctgccaaaaccctgcagatctttaacatcgagatgaagagtaagatgaaa
gcccacaccatgactgatgatgtcactttctggaagtggatctctcttaacagtcttgcc
ctggtgacggataatgcagtctatcattggagcatggagggagactctcagccagtcaaa
gtgtttgacagacattccagcctggcaggctgtcaaatcatcaactaccgcaccgatgcc
aagcagaagtggctgctgctcattggcatttctgctcagcaaaacagagttgttggtgcc
atgcagctatactcagttgacaggaaggtgtcacagcctatcgagggtcacgctgctgcc
tttggccagttcaaaatggagggaaatgcagaagaatccactctcttctgtttcgctgtg
cgaggtcaggcaggaggaaagcttcacattattgaagtggggacaccaccgaccggaaac
cagccattcataaagaaagctgtggatgtgttcttccctccagaagcacagaatgacttc
ccagttgccatgcagatcagctccaaacaggacgttgtatttctcgtcactaaatacggt
tacattcatctgtatgacctggagacgggcacctgcatctacatgaacagaatcagcggg
gagaccatttttgtgacggcaccccacgaagccacatctggaatcatcggtgtgaacagg
aaaggacaggtgttgtcagtgtgtgttgaggaggagaacatcatccagtacatcaccaat
gtgctgcagaatccagacctggctttacggatggcagtccgaaataatctggcaggagcc
gaggagctgtttgcccgcaagtttaacaacctctttgccgcaggaaactactcggaggca
gctaaagtggccgctaatgctccaaagggtatcctgcgtactcctgacaccatccgccgg
ttccagggcgtcccggcccagcccggccagacatccccacttctgcagtatttcgggatc
ctactggaccagggccagctcaacaagtttgagtctctggagctgtgcagacccgtcctt
cagcagggccgcaaacaacttctggagaaatggctgaaggaggacaagcttgaatgctca
gaggagttgggcgacttggtgaagtctgtggaccccactcttgctcttagtgtctacctg
agggccaacgtacccaacaaagtcattcagtgtttcgcagaaaccggccagttccccaag
attgtcctgtatgccaaaaaggtgggctacactccagactggatcttcctgctgaggaac
gtgatgcggatcagtcctgatcagggtctgcagtttgctcagatgctcgttcaggatgag
gaaccgctggctgacatcacacagatcgttgatgtgtttatggagtataacctggtccag
cagtgcacgtccttccttttggatgctctgaaaaacaaccgcccatcagaaggtccactg
cagacccgtctgctggagatgaacctgatgcatgcaccacaggttgcagatgccatccta
ggaaatcagatgttcactaactacgatcgtgcccacattgcccagctgtgtgagaaggca
gggcttctgcagagagctttagagcactataccgacctgtatgacatcaaacgagctgtc
gtacacacgcacctgctcaacccagagtggctggtgaactactttggcgctctgtcagtg
gaggactctctggagtgtctgagagccatgctttctgctaacatcaggcagaaccttcag
atctgtgtccaggtggcttccaagtatcatgagcagctgagtacccagtccctaactgag
cttttcgagtctttcaagagttttgagggtctgttctacttccttggctcgattgtgaac
ttcagccaggactcggaggtgcatttcaaatacatccaggccgcatgcaagacgggccaa
atcaaagaggtggagcggatctgtcgggaaagcaactgctatgaccctgaacatgtcaag
aactttctcaaggaagctaaactcaccgaccagctgcctctcattattgtgtgcgatcgc
ttcgacttcgtccatgatcttgtactctacctgtaccgaaacaacctgcagaagtacatt
gaaatctacgtgcaaaaggtgaacccaagccgtctgcctgtggtaattggagggctcctg
gatgttgactgctctgaagacgtcatcaaaaacctgatcctggttgtgcggggccagttt
tccaccgatgagctggtggcagaagtggagaagagaaacagactgaagctgttgttgcca
tggttggagtctcgtatccatgagggctgtgaggagccagctacccacaatgccttggcc
aagatctacattgacagcaacaaccacccagaacgcttcctgcgggaaaacccatactac
gacagccgtgtggtggggaaatactgcgagaaaagagaccctcacctggcctgtgttgcc
tatgagagaggacagtgcgaccaggagctcatcaacgtgtgcaatgagaactcgctgttc
aagagtttgtcccgttacctggtgcgacgcagagacccggacctctgggtcagtgtgctt
ttggagaccaatccctacaggaggccccttattgaccaggtggtgcagacagccctgtca
gagactcaggacccagaggaggtgtcggtcacagtgaaggccttcatgactgctgacctg
cccaatgaactcattgagctcctggaaaagatcgtcctggacaactcagtgtttagtgaa
cacagaaacctgcagaacctgctcatcctaacagccatcaaagcagaccgcacccgcgtc
atggaatacatcaaccgcctggacaattacgacgccccagacatcgccaacatcgccatc
agcagcgagctgttcgaggaggcctttgctatcttcaggaagtttgatgtcaacacctct
gcagtgcaggttctgattgagcacatcagtaatctggaccgggcgtatgagtttgcggag
cgctgtaatgaacctgcagtgtggagtcagctggctaaggctcagctgcaaaagggtctc
gtcaaagagtccattgactcctacatcaaggctgatgacccctcggcttacatggaggtg
gttcaggtttcttcccagagtggtaactgggaggacttggtgaagtttctgcagatggcc
agaaagaaggccagagagtcatacgtggagacagagctgatcttcgcactggccaaaacc
aatcgtctcgctgaactggaggagtttataaatggaccaaataatgcacacatccagcag
gttggagatcgctgctatgacgagaagatgtacgaggctgccaaacttctgtacaataac
gtctccaacttcggccgcttggcttctacactggtccacttgggcgagtatcaagccgcc
gtggacggtgcccgcaaggctaacagcactcgcacatggaaggaggtgtgctttgcttgt
gtggatgggaaggagttcagattggctcagatgtgtggccttcacatcgtggttcatgcc
gatgaactagaagagctcatcaactattaccaggaccgtggctattttgaggagctgatc
accatgctggaggcggcgttagggttggagcgcgctcacatgggcatgttcacagagttg
gccatcctctactctaaattcaaaccacagaagatgagggaacacctggaactcttctgg
tccagagtcaacatcccaaaggtcctgagggccgcagagcaggctcacctgtggggagag
cttgttttcctctacgataagtatgaagaatatgacaacgccatcatcaccatgatgagc
catcccacagatgcctggaaagagggacagttcaaggacatcatcaccaaggtggcaaac
gtggaactgtactacaaagcaatccagttttatctggagttcaagcccttgttactgaac
gacctgctcatagttctttccccaagactggatcactcgcgtgccgtcaacttcttcagc
aaggttaaacagcttcctctcatcaagccttacctgcggtcagtacaaaaccacaacaac
aagtctgtcaatgaagcacttaacaacctcttcatctcagaggaagactatcaggcactc
aggacatctatagacgcatacgataactttgacaacatctcactggcccagcgtctggag
aaacacgagctgatcgagttcaggagaatcgctgcttacctcttcaagggcaacaaccga
tggaagcagagtgtggagctgtgcaagaaagacaaactctacaaggatgccatgctgtat
gcatcagagtcgaaggacacagagctggccgaggagctgctgcagtggttccttcgggaa
gataagaaggagtgtttcgccgcctgcctcttcacctgctacgacctgctcaggcctgat
gtggtgctggagacggcgtggaggcacaacatcatggactttgccatgccttacttcatc
caggtgatgagggaatacctcagcaaggtggacaagctggatacctcggagtccttgagg
aaagaggaggagcaggcgacagagactcaacccattgtttatggcacgcctcagcttatg
ctgacagcaggtcccagtgtgcctgtccccccgcagcaggcttacggctatgggtacaca
gcagctcctggctacccccaggctcctcaggcccagccgggtttcggttacggcatgtaa
DBGET
integrated database retrieval system
