Sinocyclocheilus rhinocerous: 107744792
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Entry
107744792 CDS
T04916
Name
(RefSeq) hypoxia-inducible factor 1-alpha-like isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04137
Mitophagy - animal
srx04140
Autophagy - animal
srx04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107744792
04137 Mitophagy - animal
107744792
04148 Efferocytosis
107744792
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srx03000
]
107744792
Transcription factors [BR:
srx03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
107744792
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
PAS
HIF-1
PAS_9
PAS_4
Motif
Other DBs
NCBI-GeneID:
107744792
NCBI-ProteinID:
XP_016414100
UniProt:
A0A673GSV1
LinkDB
All DBs
Position
Unknown
AA seq
631 aa
AA seq
DB search
MVNSAMKRPSLEQRKVRSRDAARCRRSQETEVFYELAHSLPLPRRIASHLDKAAIMRVTL
SYLRVNRLIQSAGPTKTQTEETENPTDAFYQQALAGFILVMTEEGDMVFLSESVSKYIGM
TQLELLGQSVYEFVHPCDQEELRDIFATRPGVSKKKTEKLTEHNFFLRMKSTLTHTGRTV
NIKSATWKVLHCTGHMQMFSGDDENSPPAGSFLTLLCEPIPHPSSVEFPLDSSTFLTRHN
MDLTFTQCDGRVTELVGYQPEDLIGQSAYEFYHALDFDHVTRSLHVLFSKGQVCTSHYRF
LAKNGGFVWTETQATVLYNSRTSQPEAVVCLNFILSGVEEADVVFSLEQTCEKPKPRAEK
LSVLEEEKDSDMEEESNTATLFLQMKENPEELLQLAPHSGDAIISLTECVELSFCCPPSP
NTLPESPQDLCTPELRKLLSPIFDRPTKSPPAASPAEELPMETEGVEKFFALKPEESITL
KGQSEAMDELDLDMLAPYISMDDDFQLTFLPQSETAAPSDMLTNTSRKRGLEDEEEDDIP
ILAAKWEKKPKSGSIEEQLLLSHTLLNTLSDDGSEEFEPPPQKRSQLLTDRDPLLGGAQA
LCDTAALMRDTFLSRPPDLMRPVAETMPSLT
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggtgaactcagcgatgaaaaggcccagtttggagcagcggaaggtgcgttcacgtgac
gcagcgcgctgtaggaggagtcaggagactgaggtgttttacgaactggcccactcacta
ccccttccacgacgtatcgcctcccacctggacaaagctgccatcatgagggtgacactc
agctatctgcgcgtgaaccgattgatccaatcagcggggccaaccaaaacacagactgaa
gaaactgagaatcccactgatgccttttatcagcaggcactggctggctttattctggtg
atgactgaggaaggggacatggtcttcctctcagagagtgtcagcaaatacatcggcatg
acacagctggagctgcttggacagagcgtgtatgagtttgttcatccctgtgaccaagaa
gaattgcgagacatcttcgccacaagacctggtgtttcaaagaaaaagacagagaagttg
accgaacataattttttccttcggatgaagagcacactcacccacacaggaagaacagtt
aatatcaagtctgcaacctggaaggtccttcattgcacaggacacatgcagatgttcagc
ggcgatgatgagaactcgccccctgctggcagcttcctgactttgctgtgcgaacccatt
cctcacccctccagcgttgaattcccactagacagcagcaccttcctcacacgccataac
atggacctgactttcacacaatgtgacggacgagtcactgagcttgttggataccaaccc
gaagatctgattggccagtctgcctatgagttttatcacgcccttgattttgatcatgtg
accaggagtttacacgtcttgttctccaagggccaggtgtgcaccagccattaccgcttt
ctggctaagaatggaggatttgtctggactgagactcaagccactgtcctctacaacagc
aggacttctcaacccgaggctgtggtctgcctcaactttatcctcagtggtgtggaagag
gcagatgttgtgttctcactagaacagacctgtgagaaaccaaagcccagagctgagaag
ctgagcgtgctggaggaggagaaggactcagacatggaggaggagagcaacactgcgacg
ctcttcctccagatgaaggagaacccagaagagttactgcagctggcacctcactctgga
gacgctatcatttccctaacagagtgtgtggagttgtccttctgctgtccaccgagtccc
aacactctcccagaaagccctcaggacctctgtacgcctgaactccgcaagctcctctct
ccaatattcgacaggcccaccaaatctccacccgctgcgagccccgctgaagagctgccc
atggagacggaaggggtggagaagttcttcgccctcaaaccggaagagagcataactctg
aaaggacagtcagaggctatggatgagcttgatttggacatgttggctccatatatctcc
atggatgatgacttccagttgaccttcctgccccagagtgaaacggctgcaccttcagat
atgctgaccaacacttcaaggaaacgaggtttggaagatgaggaggaagatgacattccc
attctggctgccaaatgggagaagaaaccgaagagcggctccatagaggaacagcttctg
ctcagccacacattactgaataccttatccgacgatggttcggaagaatttgaaccgcca
cctcaaaagcgaagtcagctcttgaccgacagggacccgttgctgggtggagcccaagcg
ttgtgtgacacagcagctctcatgagggacaccttcctgtcgcgcccgcctgacttgatg
aggcctgttgctgaaacaatgccctcccttacttga
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