Sinocyclocheilus rhinocerous: 107744909
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Entry
107744909 CDS
T04916
Name
(RefSeq) transcription factor SOX-5-like
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srx03000
]
107744909
Transcription factors [BR:
srx03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
107744909
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
MATalpha_HMGbox
AAA_23
Motif
Other DBs
NCBI-GeneID:
107744909
NCBI-ProteinID:
XP_016414223
LinkDB
All DBs
Position
Unknown
AA seq
764 aa
AA seq
DB search
MLTEPELPQEFNRMSSKRPASPYGGTDGEVVMGTSRQRLEDEEVDGHAVIHLPLSSYCSK
VSPRSPQLLDSPPTLHANMDQDGSKGLALSPYPQHNSSTSPSKQQQQQEEGSMRPGSEPS
SASALGTPERRKGSLADVVDTLKQRKMEELIKNEPEEGPSIERLLSKDWKDKLLAMGSGN
FGEIKGTPDSLAEKERQLMGMITQLSSLREQLLAAHEEQKKLAASQIEKQRQQMELAKQQ
QDQIARQQQQLLQQQHKINLLQQQIQQVQGQLPPLMIPVFPPDQRTLVAAAAQQGFLLPP
GFNYKPGCSDPYPLQLIPTTMAAAAAATPGLGPLQLQQLYAAQLAAMQVSPGAKHSTVPQ
ANLATGTHSPTSGQSEKNRSTPPPKPKDEGAQPLNLSSKPKASESKSPTSPASPQVPALK
LGHGSLKHSAPSSIGGPPSRLSSIDLLSSITSGGYLNDHEAVTKAFQEARQMKEQLKREQ
QVLDAKVAAVNSLSLNNGRSEKDKATLESLSQQLKQSEESKFTHTMMDFGISGDSDGSPS
VSDSRIFRDSRGRGSSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKA
MTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEM
RQYFTVGQQAQLPLSPAGVVYSGALSMAGMPSPQMPSEHSSMSSSPEPVPPTSQPSYLTR
KGEEPRVKKGELRMDDGNGDAYDDFDFEDDDGDYGSDSENHITQ
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgcttactgagcctgagcttcctcaggagtttaacaggatgtcttccaagcgaccagcc
tctccatatgggggaacagatggagaggtagtcatggggacgagtagacagcgattggag
gatgaagaggttgacggacatgctgtcattcacttgcccctgagttcgtactgcagcaaa
gtgtccccgcgatctccacaactgctcgacagccccccaacactacacgcgaacatggat
caggatggcagtaaaggcctggccctgagcccctacccccagcacaactcgtctacctca
cccagtaagcagcagcagcagcaggaggaggggtccatgcggccagggagcgagcccagc
tccgcttcagctctgggcaccccggagagacgcaagggcagcctggccgacgtggtcgac
acgctcaaacagcgcaagatggaggaactcatcaagaatgagccagaggagggccccagt
attgagagactgttgtctaaggactggaaggacaagctattggccatgggttctggcaac
tttggagagatcaaaggcaccccagacagcctggcggagaaagagcgccagctgatgggg
atgatcacgcagctcagcagtctcagagagcagctactggccgcccatgaggagcagaaa
aaactggccgcttcgcagatcgaaaaacagcgccagcaaatggagttagcgaaacagcaa
caggaccagattgcacgacaacagcagcaacttctgcagcaacaacacaaaatcaacctc
ctgcagcaacagatccagcaggtccagggtcagttgcctccactgatgatacccgtgttc
cctccagatcagagaactctggtggccgctgcagcacaacaaggatttctacttcctcca
gggttcaactacaaaccaggatgcagtgacccttaccctttacaactaatccctacgact
atggcagccgctgctgcggcgacgcctggcctcggccctcttcagctacagcagttgtat
gcagctcagctagctgccatgcaggtgtctccaggggccaaacacagcacagtgcctcag
gccaacctggcaaccggaacacactcgcccaccagcggccagagcgagaaaaacagaagc
accccgccaccaaagcccaaggacgagggcgctcagcccttgaatctgtcgtccaagcct
aaggcatccgagagcaagtcacccacctcccccgcttccccacaggtccctgccctgaag
ctgggccacgggtccctgaagcacagcgccccctccagcattggaggaccgccatccaga
ctcagctccatagacctgctgtcgtccatcacctccggcggctacctgaacgaccacgag
gccgtgaccaaagctttccaggaggcccgacagatgaaggagcagctaaagagagaacag
caggttctggacgccaaagtagcggcagtcaacagcctgagcctcaacaacggtcgatca
gagaaggataaagccactcttgaaagcctgagccagcagttaaaacagtctgaagagagc
aagttcactcacacaatgatggactttggcatcagtggcgattcagatggaagcccgagt
gtgtcagactcacggatcttccgagactctcgagggcgtggcagcagcgaaccgcacatc
aagcggcccatgaacgcatttatggtctgggctaaagacgagaggaggaagatccttcag
gccttccctgacatgcataactcaaacatcagcaagatcctcggttctcgttggaaggcc
atgaccaacctggaaaagcagccatactatgaagaacaggcccgtcttagtaagcaacac
ctagagaaatacccagactacaaatacaaaccacggcccaaacgcacctgcctagtggat
ggaaagaaattgcgcattggtgaatataaggccatcatgcgcaaccgcagacaggaaatg
cgccagtacttcaccgtagggcagcaggcccagttgcccttgtccccagcgggcgttgtg
tactcaggcgcgctctctatggcaggaatgccctctccacagatgccctctgagcactcg
agcatgtctagtagccccgaaccagtcccacccaccagccagccgtcttacctcacacgc
aaaggggaggagcctcgtgtgaagaagggggagctccgaatggacgacggcaatggtgac
gcctacgatgacttcgacttcgaagatgacgacggggactatggcagtgacagcgagaat
cacatcactcagtaa
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