Sinocyclocheilus rhinocerous: 107745154
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Entry
107745154 CDS
T04916
Name
(RefSeq) LOW QUALITY PROTEIN: DENN domain-containing protein 4B-like
KO
K20163
DENN domain-containing protein 4
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
srx04131
]
107745154
Membrane trafficking [BR:
srx04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
107745154
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
DUF2464
PPR_3
PPR
SPA
Motif
Other DBs
NCBI-GeneID:
107745154
NCBI-ProteinID:
XP_016414487
LinkDB
All DBs
Position
Unknown
AA seq
1170 aa
AA seq
DB search
MTEERCPQLVDYFVVAGLAGDSSPLDEEGQQRGVRALQPVTDLAVIARGLGEDVPEGFTC
IEKTQAGHPAELSAGLLNNTHMFLCYRRGHDKPPLVELGVLYEGKDPVRSGWQVIETTPY
SRSASLSSGGPTMHRTFLMFRRAPDSQALNTLGITEISLLMPSKGETAPHTYCRVDKNLN
TGMWLLKIKLCYHKNNLXACVCVCECSGLISRYPEEDLESFPLPDSVPVFCLPMGVTVES
WPLNTKYQLPIFSTFVLTSASGDKVRLLTAYDPFTPITTRSASSSLHASARRLNTFIHQG
CICSVALQLMVWYSISGPHVLPLEKHISSFMHNVPFPSAQRPRILVQLSSYDNMLLCQPV
SSPLPLSGASFVKLLQNLGPENACSLLLAVLTEHKLLLHSLRPDVLTSVSEALVSMPFPL
RWHCPYIPLCPLRMADVLCAPMPFIVGVHSSYFELYDPPTDVVCVDLDTNTIFQSEDKKP
LSWRSLPRKHGKILLNSLSNLHKTLEKIYTPGQEEATLEFLLTDYDLIYGRQKQLELEIQ
EAFLRFMSCLLRGYRSFLLPITQAPSDRTTDCSSLFHLQGFLKSRDRAQQKFYTQLTRTQ
MFTQFIEECSFVSDRIDECHSGEHTVFIMPPEEPQEADGSDCPAHYRCVIISHFVSLLMC
VCVCVSQVCYRILMQLCGQYGQPVLAVRVLLEMKRAGITPNTITYGYYNKAVLESKWPST
NQGGRLRWAKLRNVVLAVAQFRQPIKQQQRSASFSTPAEDVLSKPRPHLALIRQSSWSGL
SESSSHESLTSLAKSNSLSSVQASGGRKGFLLFCRSVEVRETLNRKSVDENYNNVSSPSR
GLAGKLQQLLTPTRNRASVRRAASVDDRRPGANGHSRQKPSRKSQMTESLLKAKERLYNA
TSESSLSVGSDIDMTDIQTLAVPLRKSWDSAQEGAGIEVLMSSCSLCRSCNSLVYDEEIM
AGWSSDDSNLNTTCPFCSAPFVPLLNAEICDPGHVCRYLLQLLRTSPLTTRLTQGSEGTA
VRVRLLWDTLTPDTEQWPALYMLWRIHSGVPMRSYSWRHHNHPFNLSFLEEVLRWIGLNE
VHKAIMLFLDTVAKQPGTPRIQRSLYREMLFLTVAAMGKDHVASFDKRYKAAYVRLSSSL
GREELRRKRVQPPSPKAVDCRRCFLLPLEC
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgacggaggagcgctgtcctcagctggtggattatttcgtggtggcgggtctggcaggc
gactcgtctccgctggacgaggagggtcagcagaggggcgtgcgagcgctgcagcccgtc
actgatctggccgtgatcgcccgtggcctcggggaagacgttcctgagggcttcacctgc
atcgagaagacccaagcaggccatccggcggagctgagcgcaggcctgctcaacaacaca
cacatgttcctgtgctaccgcagaggacacgacaaaccgcccctcgtcgagctcggtgtt
ctgtacgagggcaaggatccggtccggtcgggatggcaggtgatcgagacgactccgtac
agtcgttctgcgagcctgagctccggcggtcccacgatgcaccgcactttcctgatgttc
cgccgagcgccggactcacaggcgctgaacacgctgggcatcactgagatctcgctgctg
atgcctagcaagggcgagacggcgccgcacacctactgcagagtggacaagaacctcaac
accggcatgtggctgctaaaaattaagctttgctatcacaagaataatctgtaagcttgt
gtgtgtgtgtgtgagtgttcaggtctgatcagtcgctatccagaggaggatctggagtcg
tttccgctgccggactctgttccggtcttctgtctgccgatgggagtgacggtggagagc
tggccgctcaacactaaataccagctgcccatcttctccacgtttgtcctgaccagtgcc
tccggagacaaggtccgtctgctcacagcttatgacccgttcacaccaataacaaccaga
tcagcgtccagttctctgcatgctagtgcccgacgacttaatacttttattcatcaagga
tgcatttgtagcgttgcattgcagctgatggtttggtactccatctctggaccgcatgtg
ctgccgctggagaagcacatctcgagcttcatgcacaacgtcccgttcccgtccgctcag
cgtcctcggatcctggtgcagctctcttcgtatgataatatgttgctctgtcagcccgtg
tcgtctccgctgccgctcagtggtgccagttttgtgaagctgctgcagaatctgggtcct
gagaacgcgtgttcgctgctgctggcggttctgaccgaacacaagctgctgctgcactcg
ctgcggcccgatgttctgacgtccgtcagcgaagcgctcgtgtccatgccgtttcctctg
cgctggcactgtccgtatatcccgctgtgtccgctgcggatggcagatgtgttgtgcgcg
cccatgcccttcatcgtgggcgtccactccagctacttcgagctttacgatccgccgact
gacgtggtgtgtgtggatctggacaccaacaccatcttccagtctgaagataagaagcct
ctgtcctggaggtctttgccgaggaaacatgggaagatcctgctgaactctctgtccaac
ctgcacaaaaccctggagaagatctatactccgggtcaggaggaggccacgctggagttc
ctgctgacggattacgatctgatctacggccgtcagaagcagctggagctggagatccag
gaggcgttcctgcgcttcatgagctgtttgctgagaggataccgatccttcctgctgccc
atcacacaagcgccctccgaccgaaccacggactgcagctcgctcttccacctgcagggg
ttcctgaagtctcgcgatcgagcgcagcagaagttttacacgcagctcacgaggacgcag
atgttcacgcagttcatcgaggagtgttcgttcgtcagcgaccgtatcgacgagtgtcac
agcggtgagcacacagtgttcattatgcctccggaggaaccgcaggaagccgacggctcc
gattgtcctgcacactacaggtgtgtgatcatcagtcattttgtctcgctcctgatgtgt
gtgtgtgtgtgtgtgtctcaggtgtgttaccgtatcctcatgcagctgtgtggtcagtac
ggtcagccggttctcgcggtcagagttctgctggagatgaagcgggcgggaataacgccc
aacaccatcacatacggatactacaataaagcggtgctagagagcaaatggccatccacc
aatcagggagggcgtcttcgctgggcgaagcttcgtaacgtggtattggccgtggctcag
ttcaggcagccaatcaaacagcagcagaggagcgcatcattcagcacccccgcagaagac
gtactgtccaagccccgcccccacttggctctgattcgtcagtccagctggagcgggttg
agtgaaagctcgagccacgaatcgctgacgagtctggccaagagtaacagtctgagcagc
gttcaggcgtcaggaggcaggaaaggttttctcctgttctgcaggtcggtggaagtgagg
gagactctgaacagaaagtcggtggatgaaaactacaacaacgtgtcgtctccgagccgc
ggtctggccgggaaactgcagcagctgctgacgcccacgaggaaccgtgcatcggtgcga
cgagccgctagcgtagacgaccggcggccgggagcgaacggacactcgcgccagaaaccc
tcgcgcaagagccagatgaccgagagtctgctgaaggccaaggagcggctgtacaacgcc
acgtctgagagctctctgtctgtagggagtgacattgacatgacggacatccagacgcta
gcagttcctctcaggaagtcgtgggattctgcacaggaaggggcgggcattgaggtgctg
atgtcgagctgctcgctgtgccgcagctgtaattctctggtgtatgatgaggagatcatg
gcgggctggtcgtctgacgactctaatctcaacaccacctgtccgttctgctccgcgccg
ttcgtcccgctgctgaacgcagagatctgtgacccggggcacgtctgcagatacctgctg
cagctgctgcggacgtctccgctgacaacacgcctcacacaggggtcagagggcacggcg
gtgcgcgtgaggctgctgtgggacacactgaccccagatacagagcagtggccagcgctc
tacatgctctggaggattcacagtggcgtccccatgcgcagctacagctggcggcatcac
aaccatcccttcaacctcagcttcctggaggaagtgctacgctggatcggtctgaacgag
gtacacaaggccatcatgctcttcctggatacggttgctaagcagcccggcactccgcgg
atacagaggagtctgtacagagagatgctcttcctcacggtggctgccatgggcaaagat
cacgtcgcttcctttgataagcgttataaggcggcgtatgtgcgcttgagcagttctctg
ggccgagaggagttgaggaggaagagagtccagccgcccagtcctaaagccgtcgactgc
agacgctgcttcctgctgccgctggagtgctga
DBGET
integrated database retrieval system
