Sinocyclocheilus rhinocerous: 107745271
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Entry
107745271 CDS
T04916
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A-like
KO
K12821
pre-mRNA-processing factor 40
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107745271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
srx03041
]
107745271
Spliceosome [BR:
srx03041
]
Complex A
U1 snRNP components
U1 related factors
107745271
Complex B
107745271
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
PTPlike_phytase
Motif
Other DBs
NCBI-GeneID:
107745271
NCBI-ProteinID:
XP_016414606
LinkDB
All DBs
Position
Unknown
AA seq
830 aa
AA seq
DB search
MSSTDANSGPSQAPPFPGVPPAGIPPLFMGPPGIPPHFPPMGMPPMGQRPPSMAPMPPGI
MPPMIPPMGAPPIGQMPAMMPPMMPGMMMPPRMPAASIQPTGPPGVSPVESAAPAAPGTT
STTSTESSPDEQSKKKSVWTEHKSLDGKTYYYNTDTKQSTWEKPDDLKSPAEQMLSRCPW
KEYKSDTGKPYYYNSQTKESRWTKPKELEDLEAMIKAEENGTVDVVAPGTTPALTSQSES
SVTVAAVAETEATMATVATEEQPSHVPAPVAEVSSDVTVNSTEETPSIETQPSNDVSKEE
RPELVKKVYKPWIQAKSYASFDFGLWLMNATGARGVSSNASWEQAMKLIINDPRYSALPK
LSEKKQAFNAYKVQTEKEEKEEARIKYKESKETFQRFLENHEKMTSTTRYKKAEQMFGDQ
EVWSCVPERDRQEIYEDVLFYLAKKEKEQAKQLRKRNWEALKNILDNMANVTYRTTWSEA
QQYLLDNPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEEKQKTLLRERRRQRKNRES
FQKFLDELHDHGQLHSMSAWMEMYPTVSADIRFNNMLGQPGSTPLDLFKFYVEDLKARYH
DEKRIIKDILKDKGLLVEVNTGFEEFGSVISSDKRATTLDAGNIKLAFNSLLEKAEARER
EREKEEARKMKRKEAAFKSMLKQATPPLEPEATWEGVCHAITIKYQLKLKLILESLSAKA
VGYVCDLSLQHECQHHHSKTKKHAKKSKKHHRKRSRSRSGSESEDDEYHSKKKKLSASKS
PSEHSSSGESERSYKKSKKHKKKGKKRRHKSVSREQLNFFNTSQLMSLTY
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgactgatgctaatagtggccccagtcaagcaccaccttttcctggtgtacca
cctgcaggaatccccccgctctttatggggccaccaggaatcccgcctcacttccctcca
atgggaatgccacccatgggccagaggccgcccagcatggcccccatgcccccgggaata
atgcctcccatgatccccccgatgggagctccacccataggacagatgccagccatgatg
ccaccaatgatgcctggaatgatgatgcccccccgtatgccagctgcatcaatccagcct
acaggaccgcctggtgtgagtccagtggagtctgcagcaccggctgctcctggaacaacc
agcaccacatcaactgagtcttcgcctgatgaacagtcgaaaaagaagtcggtatggacc
gagcacaaatccctggatggaaaaacatattactacaacaccgataccaaacaatccacc
tgggagaaaccagatgatctcaaatcacctgcagagcaaatgttgtccagatgcccgtgg
aaagagtacaagtcagacaccggcaagccctattactacaactcacagaccaaagagtct
cgctggactaaacccaaagaactggaggacctggaggcgatgataaaggcggaggaaaac
gggacggttgacgttgtggctcctggcaccacccctgctcttacatctcaaagcgagtcc
tctgttaccgtggcagcagttgctgagacagaggctaccatggcgacagtcgccacagag
gaacagccgtctcacgtgcctgcaccggttgctgaggtcagcagtgatgtcaccgttaac
tccactgaggaaacgccgagcatagagacacaacccagtaatgatgtttctaaggaggag
agacctgagctggtgaagaaagtttacaagccttggattcaagcgaagagttacgccagt
tttgatttcggactttggctaatgaatgcaaccggagctcgcggcgtttcctccaatgca
tcatgggagcaggcaatgaagctgataattaatgaccctcgttacagtgctctgcccaag
ctaagtgaaaagaaacaggcgttcaatgcttataaagtccagacagagaaagaggaaaag
gaagaagcccgaatcaaatacaaggagtctaaagagactttccagcgcttcctggagaac
catgagaagatgacctcaaccacacgatacaagaaagcggagcagatgtttggcgatcag
gaggtgtggtcatgtgttcccgagagagacaggcaggagatctatgaagatgtgctgttt
tatttagcaaagaaagagaaggaacaagccaagcagctgcggaagaggaactgggaagct
ctgaagaacattttggacaatatggccaatgtgacgtacagaactacgtggtctgaggca
cagcagtacctactggataaccccacctttgctgaagatgaggagctacagaacatggac
aaagaagatgctctgatctgtttcgaggaacacatccgtgctcttgagaaagaggaggag
gaagagaaacagaaaactctgctgcgagagagacgcagacagcgcaagaacagagagtct
ttccagaaattcctggatgagcttcacgatcacgggcagctgcactccatgtctgcctgg
atggagatgtacccgaccgtcagcgctgatatccgcttcaacaacatgctgggccagcca
ggctccacccctctggacttattcaagttttacgtggaggatctgaaagcgcgttatcat
gatgagaagagaatcattaaagacatcctgaaggataagggcttactggtggaggtcaac
acaggctttgaggagtttggctcagtgatcagttcagataaacgtgccaccacgctggat
gcaggaaacatcaaactggccttcaacagtttgctggagaaggctgaagcacgtgagagg
gagagagagaaggaggaggccaggaagatgaagaggaaggaggcggcgtttaagagcatg
ctgaaacaggccacaccccctctagagcctgaggccacatgggagggagtatgtcatgct
attacaataaaatatcaattaaaattaaaattaatcttggaaagtctttcagctaaagca
gtgggttatgtctgtgatctctctcttcagcacgagtgtcaacatcatcattcaaagact
aagaaacacgccaagaaatccaagaaacaccacagaaaacgttcccgatctcgatcaggc
tcggagtcagaggatgatgagtatcactcgaagaagaagaaactctccgcatctaaatct
ccatccgagcactcgtcctctggggagtctgagaggagttacaagaaatctaagaaacac
aagaagaagggaaagaaaagacgacacaaatcggtgagtagagaacaactgaacttcttt
aataccagtcaattgatgagtctgacttactaa
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