Sinocyclocheilus rhinocerous: 107745805
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Entry
107745805 CDS
T04916
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
107745805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
srx03009
]
107745805
Ribosome biogenesis [BR:
srx03009
]
Eukaryotic type
Pre-60S particles
RNases
107745805
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
Pox_B6
Motif
Other DBs
NCBI-GeneID:
107745805
NCBI-ProteinID:
XP_016415292
LinkDB
All DBs
Position
Unknown
AA seq
1216 aa
AA seq
DB search
MLRSTGFFRGIDCPFYSENNSGKACADGCSRPYCHFRHSKQRRASSGIYDIKKTKALSAS
PNDQGYDPFSPEVVRPGEHYNVEPPSSLLAGQDVDLGTVELELVNRAIEVVRNEMERDKK
KLSQIGDQEYEPTTNSVKRPKPTASSHQGYDPGSYQMGQASEYTPSSRSSKYTLDSDNSS
TNALEYVPTAVSKTSIKKVLPPPPSRVKCKYTLDNSKPTTDMEYDPLSNYSAKLAVKEQK
TLCSEGEGRKRVYPEKQGEDEEYVPTAKKPRSLSPKADVPKYTASFSESDEESSGTEYRP
TSISRMQRKGINISLKKERESGAMGQQVNRVSKTDEVFSQSGSDDVDRTNKKIDKKTPVS
QSKNIKSDKLKKAEKESSKKSQKERRKSSSADKTSKNSSKKDKNQSKNEDRISKSKEKVW
KDGSESKSTDEKNKKIVKIKSEHSHKEKDRGSGNIKKPKMDKPVKTDKVPSKFKDQMNGK
LESSTKEKGKKKSSHGSSSNSTKDKSKKKILVLDHKEASETKQRNLSHMDLFGAESAEED
DEEDERIVRKSASAFKRGSIMNNKRKTSEDTSSSEDNSEVDDDDDGGEAVDYSCLQDEME
YDSDPMEECLRIFNESKEVKMEDKGRQAKQPSTELEEGEEEETESTLTTLFPGQKKRVSH
FKSQGKSETSLNAVPMPQRRMTAQEICYQRMQKAQQQAAQLAAAVKAASASTNPKQGLSG
EKRRVAHRPNASLPSLKPGLADASSRLLSPTRVAADQLSLKAHTSVGILSKTTSTTMQKR
VAHTPTMKSSAMKRPVIPAEFGAKVPTNVRQRYLNIFIDECLKFCSSEQEAFQMALEEEK
VVYDRSSSKNIYLNVAVNTLKKLRSKSTPTSPSIKSPAVSVNTKCQSHEGVLGGRLAATT
SYTINRSGKQQDVDLKGAILYKKLKKYAMTEEQLQEHGYPRPHPEVSGHAVVHNLPEKKN
NDPFFKICCRCGAEYKINANGSCVRKEECSHHWGRLRRNRVPGGWETLYNCCSGAVGSPG
CEVSKQHVQDGRKESLDGFVKTFSKPLPVDGNGGVYALDCEMCYTKQGLELTRVTVINSD
LKVIYDTFIKPGSKVVDYNTRFSGVTQDDLENTTITLRDVQAVLLSMFSAESILIGHSLE
SDLFALKLIHSLVVDTAIVFPHRLGLPYKRALRNLMADYLKRIIQDNVGGHDSSEDARAC
MELMIWKIKEDAKGKR
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgttgagatctacgggttttttccgtgggattgactgtccgttttattctgagaataat
agtggaaaagcctgtgcagatgggtgcagcagaccctactgtcacttcagacacagcaaa
caaagacgagcctcctctgggatatacgacatcaaaaagactaaagcgctttctgcgagt
ccaaacgatcaaggatatgatccattcagtccagaggttgtaagaccaggtgaacattat
aatgtggagccaccgtcgagcctgttggcgggacaggatgtggacctgggtactgtggag
ctggagttggtcaatcgggccattgaggttgttcgcaatgagatggaaagggacaagaag
aagctttctcaaatcggcgatcaggaatatgagccgaccacaaactctgttaagagaccg
aaacccactgcatcatcccatcagggctacgatcctgggagctatcaaatgggccaagcg
agtgaatacaccccatcctctcgctccagcaaatacactttagactcagacaacagcagt
accaatgcactggaatatgtgcccactgctgtctccaaaacaagcattaaaaaggtgtta
cctccgccaccgtcccgtgtaaagtgtaaatacactctggataattccaaaccaaccacg
gacatggagtatgaccctctctcgaactattcggctaagctggctgttaaagaacaaaag
accttgtgttcagagggagaggggagaaagagggtttaccctgaaaaacaaggggaagat
gaggaatatgttccaacggcaaagaaaccaaggtcattgtctcctaaagcagatgtcccg
aagtacactgcaagtttctctgaatccgatgaggaaagttctgggacagagtatcgtcca
acatccattagtcgaatgcagcgcaaggggatcaacatcagcttgaaaaaggaacgagag
tcaggtgcgatgggacagcaagtaaatcgggtgtctaaaactgatgaggttttctcacag
agcggatcggatgatgtggacaggacaaacaaaaagatagacaaaaagacgcctgtgagt
cagtcgaaaaatataaaatctgataaactgaaaaaagcggagaaggaatccagtaagaaa
agtcaaaaagaaaggcggaaaagttcaagtgccgacaagacttcgaagaattcaagtaaa
aaagacaagaaccaaagtaagaatgaggacagaatcagtaagtccaaggaaaaggtgtgg
aaagacggatctgagtcaaaaagtactgatgaaaagaacaagaagatagttaagataaag
agtgaacatagccacaaggaaaaagatagagggagtggcaacatcaagaagcccaaaatg
gacaagcctgtgaaaaccgataaggtgccgtccaaattcaaagaccagatgaacggaaaa
cttgagagcagcacaaaggagaagggcaaaaagaaaagcagccatgggagcagcagcaac
agcactaaagataaaagcaaaaaaaagatcttagtccttgatcacaaagaggcaagtgag
accaaacagaggaatctgagccacatggacttgtttggtgctgagagtgctgaagaggat
gatgaggaagacgagaggatagtgaggaagtcggcctctgcttttaaacggggaagcatc
atgaataataaaaggaaaacttctgaagatacatcatcatcggaagataattctgaagtg
gatgatgatgatgatggtggtgaagcagtggactactcctgtctgcaggatgagatggag
tatgactcggacccgatggaggagtgtctgcggatatttaacgaatccaaagaggtgaag
atggaagacaaagggagacaagctaagcagccttcaacggaactggaggagggggaggag
gaagaaacagaaagcactttaactactctctttcctggccagaagaagagggtgtcacat
tttaaatctcaaggaaagtcagagacgtcgctgaacgctgtgccgatgccgcagcggagg
atgacagcacaggagatctgttaccaacgcatgcagaaagcccagcagcaggcggcacag
ctggctgctgcagtaaaagctgcatctgcatcaaccaacccaaaacaggggctctctgga
gagaaacgacgggttgcgcaccggccaaatgcctccttgccctccttaaagcctggacta
gctgatgccagcagtcggttgttgtcacccaccagagtggcggcagatcagctttcactc
aaagctcatacatcggtgggcatcctgtcaaagaccacatccactacaatgcagaaaaga
gtggctcacacccccaccatgaagagttctgccatgaagcgtcctgtcattcctgcagaa
tttggggccaaggtgcccactaatgtccgccagcgttacctaaacatcttcattgatgag
tgcctgaagttttgttcctctgaacaggaagcttttcagatggctctggaagaagagaag
gtggtgtatgacaggagcagcagtaagaacatctacctgaatgtagctgtgaacacactg
aagaaacttcgcagcaaaagcacacctacgtccccttccatcaagagcccggctgtatca
gtgaatacaaagtgtcagtcccatgaaggagtacttggtggacggcttgctgccacaacc
agctacacaatcaaccgctctggcaaacagcaggatgttgaccttaaaggagccattctc
tacaaaaaactgaaaaagtatgcaatgactgaagaacagctgcaggagcatggctacccc
agacctcaccccgaggtgtcggggcatgctgtcgtccataacctcccagagaagaaaaac
aatgacccttttttcaaaatctgttgtcgatgtggcgccgagtacaagataaatgctaac
ggcagctgtgtgcgtaaggaggagtgcagtcaccactggggaagattacgcagaaacaga
gttccaggaggttgggagacactttacaactgctgctctggtgcagttggttctcctgga
tgtgaagtgtctaaacaacatgtacaagatgggcgtaaagagtccttggatggttttgtg
aagacttttagcaaaccattgccagtagatggaaatggaggtgtctacgccttggactgt
gagatgtgctacacaaaacaaggtttggagctgaccagagtgaccgtcattaactctgac
ctcaaggttatttatgacacatttatcaagcctggcagcaaagtggtggattataacaca
cggttttcaggtgtgacacaggatgatctggagaacaccaccatcaccctgagagacgtg
caggcggtgctgctgagcatgttcagtgcagagtccattctaattggacacagtcttgag
agtgacctgtttgcgctcaagcttattcacagcttggttgtggacactgctattgtgttt
cctcaccgcctgggtttgccctacaaacgtgccctgcgcaaccttatggccgactacctc
aaacgcattattcaagacaacgttggagggcatgactccagtgaagatgcccgggcctgc
atggaactcatgatctggaagatcaaagaggatgccaaggggaagagatga
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