Sinocyclocheilus rhinocerous: 107745853
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Entry
107745853 CDS
T04916
Symbol
slit2
Name
(RefSeq) slit homolog 2 protein isoform X1
KO
K06839
slit 2
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
srx00536
]
107745853 (slit2)
Glycosaminoglycan binding proteins [BR:
srx00536
]
Heparan sulfate / Heparin
Axon guidance molecules
107745853 (slit2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_2
LRRNT
Laminin_G_1
LRR_9
LRRCT
EGF_TEN
LRR_1
hEGF
LRR_14
EGF_Teneurin
EGF_DL_JAG
LRR_EndoS
JAG1-like_EGF2
EGF_3
Laminin_G_3
EGF_C8A_B_C6
Motif
Other DBs
NCBI-GeneID:
107745853
NCBI-ProteinID:
XP_016415339
LinkDB
All DBs
Position
Unknown
AA seq
1542 aa
AA seq
DB search
MFVLKAVVLCALLGGAGAQSCPSQCSCSGTAVDCHGQSLRSVPRNIPRNAERLDLNANNL
TKITKADFAGLRHLRVLQLMENKIISIERGAFQDQKELERLRLNRNNLQVLPELLFLTTT
KLFRLDLSENQIQGIPRKAFRGATEIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNI
SRLSVASFNHMPKLRTFRLHSNSLLCDCHVAWLSDWLRQRPRLGLYTQCMAPPSLRGHNI
AEVQRKEFMCTDFSEGPQSHSSCSVLQCPELCSCSNNIVDCRGKGLTEIPTNLPETITEI
RLEQNSIKIIPPGAFSPYKRLRRIDLSNNQITELASDSFQGLRSLNSLVLYGNKITELPK
GLFDGLFSLQLLLLNANKINCLRVDSFQDLQNLNLLSLYDNKLQTIAKGTFSSLRAIQTL
HLAQNPFMCDCHLKWLADYLQDNPIETSGARCTSPRRLANKRIGQIKSKKFRCSGIHHIN
KCVEDYRSKLGGDCFADLACPEKCRCEGTTVDCSGHKLTKIPDHIPQYTAEIRLNNNEFT
VLEATGIFKKLPQLRKINLSNNKITDIEEGTFEGASGVNELILTSNRLESVHYGMLKGLS
GLRTLMLRSNKISCVNNGSFTGLSSVRLLSLYDNLITSMSPGAFDTLHSLSTLNLLANPF
NCNCHLAWLGEWLRKKRIVTGNPRCQSPYFLKEIPIQDVAIQDFACEDGNDENSCSPLAR
CPAECSCLDTVVRCSNKGLKVLPKGIPKDVTELYLDGNQFTQVPLELSNYKHLTLIDLSN
NQISTLSNHSFSNISELLTLILSYNRLRCIPVKAFDGLKSLRLLSLHGNDIAVIPDGAFK
DLSSLSHLALGANPLYCDCHMQWLSDWVKSGYKEPGIARCTGPGEMTDKLLLTTPSKKFT
CTEVPGTCGFPVPGPVDVSILAKCNPCLSNPCKNDGTCSNHTVDFYRCTCPYGFKGQDCE
EPIHACISNPCQNGGTCHLKDGEENTHWCVCPDGFEGDECEINIDDCEDNDCENNSTCVD
GINNYTCLCSHEYTAANNNEVEKGELCEDKLDFCASELNLCQHDSKCILTAKGFMCECTP
GYTGEHCEVDFDDCEDNKCKNGAQCTDAVNGYTCVCPEGYSGLFCEFSPPMVLPRTSPCD
HYDCANGAQCVVKDTDPVCQCLHGYEGVHCEKLVSVNFINRESFLQIPSNLITEQANISL
QIATDEDNGVLLYKGDNEHIAVELYRGRLRVSYDSGSYPPSAIYSVETINDGSFHVVELV
AKDQSLSLSIDGGSPKSINTASSPSPVPSPAPLYLGGIPQQSGLASLRSSGRNGSSFHGC
IRNLYINDQLQDLTQFLLQEGVVPGCQPCQRSVCAHGQCHATGQSSFSCECEAGWTGPLC
DQQINNPCDGNKCIHGSCLPINSYSYSCRCHPGFAGVLCDEEEQLSPCQYIACKHGRCRV
SGLGKAYCECNSGYTGPSCDREMACRGERVRDHYQTQQGYAACQSTEKVSRLECRGSCGD
GTSCCAPLRSKRRKYTFQCTDGSSFVQEVEKVVKCGCTKCPS
NT seq
4629 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttttaaaagcagtggtgctatgtgcattgctcggcggggctggggctcagtcg
tgcccgtctcagtgctcctgcagcgggacagcggtggactgccatgggcagagtctgcgg
agcgtgccgcggaacattccccgcaacgctgagcgacttgacctgaatgcaaacaatctg
actaaaatcactaaggcagatttcgcgggactgcggcacctcagagttctgcagctaatg
gagaacaagatcatttctattgagagaggggcatttcaggaccagaaagagctggaaaga
ctgcgtctcaacaggaataatcttcaggttcttccggagttgctgtttctgaccacgacc
aaactcttcagacttgacctgagtgaaaatcaaatccaggggattcccagaaaagcattc
agaggagctactgagatcaaaaacctgcagctggactataatcagatttcctgcattgaa
gacggagcgttcagagctctgcgggacctagaagtactcacactgaacaacaacaatatc
tctcgtttgtcagtggccagttttaaccacatgcccaagcttaggacatttcgtctgcac
tcaaatagtctgctatgtgattgccatgtggcctggctctctgattggctgagacagagg
ccccgccttggcctctacacacagtgtatggctccgccctctctgagaggccacaacatt
gctgaggttcagaggaaagagtttatgtgtacagacttcagtgaagggccccagtcacac
tcgtcctgtagtgtgctgcagtgtcctgagctgtgcagctgcagtaataacatagtggac
tgccgggggaaaggactaacggaaatacccaccaacctgccagaaaccatcactgaaatc
cgactggagcagaactccatcaagattattccaccaggagccttctcaccttacaaacgg
ctgcggagaatagatttgagtaataatcaaataactgaattggcttcagactcttttcaa
ggtctccgatctttgaattctctggttttatatggaaataaaatcactgaacttcccaaa
ggcctttttgatggactattctcattgcagctactgttgctaaatgcgaacaagatcaac
tgtttgcgcgtagattctttccaagacctgcagaatctgaatcttctgtcactttatgac
aacaaactccaaaccatcgcaaagggaaccttctcttctctccgagccatccaaacactt
catttggcccagaatccctttatgtgtgactgccatttgaagtggttagctgactacctg
caagacaacccgattgagaccagcggagctcgatgcaccagtccccgccggcttgctaac
aaacgcatcggccagatcaagagcaaaaagttccgctgttcagggattcatcatatcaat
aagtgtgtggaagactaccgatcaaaactaggtggggattgcttcgctgacctggcgtgc
ccagagaagtgtcgctgtgaaggaaccacagtggactgctctggacataagctcacaaag
atcccagaccacatacctcaatatacagcagaaatccgcttgaacaataatgaatttaca
gtgctggaggctacaggaatctttaagaagcttcctcagctgcgcaaaattaatcttagt
aacaataagatcacagatattgaggagggcacatttgagggggccagtggagtgaatgaa
ctcatactgacgagcaatcgcttagagagtgtccactacggcatgctgaaaggcctcagc
ggcctccgtacactgatgttgaggagtaacaagataagctgtgtcaataacggtagtttt
actggtctgagctctgtgagactgctctccctctatgataacctgatcacctccatgtcc
ccgggagcctttgacacactacattctctctcaacactgaacttgctggccaatccgttt
aactgtaactgtcatctggcctggctaggggaatggctccgtaagaaacggattgtcaca
ggcaacccccgctgtcagagcccatactttcttaaggagattcctattcaagatgtggcc
attcaagactttgcctgtgaagacggtaatgatgagaatagctgttcacccctggctcgc
tgtcctgctgagtgttcgtgtttggatacggtggttcgctgcagtaataaaggacttaag
gttttacccaaaggcattcctaaagacgttacagaactctatctcgatggcaaccagttc
acgcaagtccctctggaactatccaattataaacacctcactctcatcgatttgagtaat
aaccagatcagcacattgtccaaccacagcttcagtaacatttccgagctgctcacccta
attttaagctacaacagactgaggtgtattcctgtaaaagctttcgatggcctcaagtct
ctgcgcctgttgtctctccatggtaatgatattgctgtgatcccagatggagctttcaaa
gatctgtcctcgctctcccacctggctttgggagcaaaccctctgtactgtgattgtcac
atgcagtggctttctgactgggtaaagagcggctacaaggagcctggaattgcacggtgt
accggtcctggagagatgaccgacaaactactgctgactacaccctccaagaaattcaca
tgcacagaggtgccggggacttgtggttttcctgtgccaggtcctgtggatgtgagcatt
ttggcaaaatgtaacccttgtttatccaacccttgcaaaaatgacggaacctgcagtaac
catactgtcgatttttacagatgcacctgtccatatggttttaagggccaagactgtgag
gaaccgattcatgcatgcatcagtaacccctgtcagaatggaggcacctgtcatctgaag
gacggagaggagaacactcactggtgtgtctgtccagatggatttgagggcgacgaatgt
gagataaatattgatgactgtgaagacaatgactgtgagaataactcgacgtgtgtggat
ggtatcaacaactacacctgtctctgttcacatgaatacacagctgctaataataatgag
gtggagaaaggggagctgtgtgaagataagctggatttctgcgcttcagagctaaacctg
tgtcagcacgactcgaaatgtattctaaccgctaaaggattcatgtgtgagtgtactcca
ggttataccggggaacactgtgaggtggattttgatgattgtgaagataacaagtgtaaa
aacggggctcagtgtactgatgctgtgaatggctacacgtgtgtgtgtccagaagggtac
agtgggttgttctgtgagttctcccctccaatggtcctgccgagaacaagtccatgtgac
cactatgactgtgccaacggtgcacagtgtgttgtcaaggacacggatcctgtgtgtcag
tgtctccatggttatgaaggcgtgcactgtgagaagctggtcagtgtcaacttcatcaac
agagaatcgttcttgcagatcccctccaacctcattacagaacaggccaatatatcacta
cagattgccacagatgaggataatggagtgctgctgtataaaggcgataatgaacacatt
gcggtggagctctacagaggccgactgagagtcagttatgactcgggatcctacccccca
tctgccatctacagtgttgagactataaatgatggcagttttcatgtagtggagctggtg
gcaaaggatcagtctctgtctctctccattgatggaggaagccccaaatccatcaacact
gccagcagccccagcccagtacccagccctgctccactttatctcggtggaattcctcaa
cagtctggactggcctcgttgcgttcctccgggaggaacggctcgagtttccacggctgt
atccgaaacctctacattaacgaccagctccaggacctcacccagttcctgctgcaggag
ggggtggtgcccggctgccagccctgccagcggagtgtgtgtgctcatgggcagtgccat
gctactggacagtcctccttcagctgtgagtgtgaggcaggatggaccggcccgctttgt
gaccagcagatcaacaacccatgtgacgggaacaagtgtatccatggctcctgtctgccc
attaactcatactcgtacagctgtcgctgtcatccaggctttgcaggtgtattatgcgat
gaagaggagcagctgagtccctgtcagtacatagcgtgtaaacacgggcgctgtcgtgtg
tctgggctggggaaggcctactgtgagtgcaacagcggctacacagggccaagctgcgat
agagagatggcgtgtcggggggaacgggtccgagatcactatcagacgcagcagggctac
gcagcgtgccaaagcacagagaaggtctcccgtttagagtgtcggggcagctgcggggac
gggacctcctgctgcgcccccctccgcagcaaacgaaggaaatacaccttccaatgcaca
gacggatcctcttttgtacaggaggtggaaaaggttgtcaagtgtggctgcacaaaatgt
ccatcctaa
DBGET
integrated database retrieval system
