Sinocyclocheilus rhinocerous: 107745856
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Entry
107745856 CDS
T04916
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
srx04131
]
107745856
Membrane trafficking [BR:
srx04131
]
Endosome - Lysosome transport
Others
Others
107745856
Endosome - Golgi transport
107745856
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
107745856
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
Neurobeachin
WD40
Laminin_G_3
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR75_1st
Beta-prop_EML_2
WDR55
WD40_MABP1-WDR62_2nd
WD40_WDHD1_1st
SUKH_6
UNC45-central
Motif
Other DBs
NCBI-GeneID:
107745856
NCBI-ProteinID:
XP_016415350
LinkDB
All DBs
Position
Unknown
AA seq
2878 aa
AA seq
DB search
MASAGDSAGRIPIRGIRMKFAVLAGLLEAGEVSNRDIVETIFNLLVGGQFDLEMNFIIQE
TESIICMVELLDKCDSTCQAEVWSMFTAVLKKSLRNQQACTEIGLIQLVLQRIDRADTMI
ADLMVDMLGVLASYSITVKELKLFFSKLKGEQGQWPPHAVKLLSVLKCMAQRIGPDSFFS
FPGKSAAAVALPPIAKWPYQNGFTFHTWLRLDPINNINVDKDKPYLYCFHTRKGLGYSAH
FVGGCLIVTSLKSKAKGFQHCVKYDFKPQKWYMVTIVYIYNRWKNSEISCYVNGELASYG
EITWFVNTSDTFDKCFLSSSETADANRVFCGQMGAVYLFSEALSAAQILAIYQLGPGYKG
TFKHKAESDLMFAEHHKMLLYDGKLSASIAFTYNPRATDAQLCLESSPKDSTSIFVHSPH
ALMLQDVKAVVTHSVQSAIHSIGGVQVLFPLFAQLDFLQHSGDELDTSVCCTLLSFVMEL
LKGSVAMQEQVLACKGFLVIGYALEKSSKVHVTRPVLDIVLAFARYLSNLPTGVLLLKQL
CDHILFNPTIWIHASAKVQLLLYTYLATEFISTVTIYNAIRRVGTVLQIMHTLKYFYWVV
NPLDRSGITPKGLDGPRPNQKEIHSLRAFLLLFVKQLIMKDHDVKEDELQSILNYLLTMH
EDDNLMDVLQLLVALMSEHPVSMVQAFDQRNGIRVIFKLLASKSEGIRVQALKVLGYFLK
YLSPKTKSEVMLAHGLFSLLTERLMLHSNQFTVTTYNVLFEILTEQICTQVIHKQHPDPD
STVKIQNPQILKVIAALLKNASPGAESMEVRRIFLSDMIKLFNNSRENRRSLLQCSVWQE
WMLSLCFINPKNSEEQKITEMVYAIFRILLYHSIKYEWGGWRVWVDTLSITHSKVTFEQH
KENLAHMFLEYQRMGSEGGSESRIRTVSGSSHDSQFLASTNGELNADETAPSTVIELRIE
EKVTDQPGDNEENRAQIPVTVSNILARDEEERQTDTIATSPETKKGDKGEQDTTKEPGKD
TEVQNMEANMDGEHARVERVEADITMTEGRVNEKERADLSVTDDAENNQTATDKDAKVET
EAVKISDEDDGKTSTAETVLHFQVEDKEKRPGDSSPEAVNEAKVEESSEASANQETSKTG
ASITNEDSTDVSSVSNLVKVSDDSTEESSFVSAAASETDDNGAEKEDDGKEKEKKLETKK
DEKPLQNEKVEETKAEPAPMVEVDLNQSTSIDETKLHTETIAGHGAVEAEQTPEVLPPDL
SKVSTAEVSPCTESISQDPGTNQDTLKAAGTETSATKTKEIKIARLDVSSVASDTERLEL
KDNSTTNLSANQAAASSPSGQGNEGSSSARPTMFRIPEFKWSHMHQRLLTDLMFSIETDV
QMWRSHSTKTVMDFVNSSENVVFVHNTVHLVSQVVDNLIMACGGILPLLSAATSSTHELE
NIEPSQGLSVEASLMFLQRLISLVDVLIFASSLNFTEIEAEKNMSSGGILRQCLRLVCTM
AVRNCLECQQHTLGKSGAESSRGQQSLLGAAKSIPAQSPVDIVTGGMSPIRDLDRLLQDM
DINRLRAVVFRDIEDSKQAQFLALAVVYFISVLMVSKYRDILEPYNDKRHAQCSQSVRST
ESVQSDLENGLSPHRRYSSIEDGKTSVITEAQTGPDAVSEALSTLSSEVRRGQYVTDIDS
KGKNVNVKDILRSLVSAPSDDIIVDPSLIPPGFLGAVGDASRDQSVQFHSFDRSVVVAPK
RMGEAPSPGMSTVSAAASVPSATAASSDGTPVNSVSVVSAGETIESTESAPGGTATSSNL
PSVPALSPVTQSSAPNMSISERLEHALEKAAPLLREIFVDFAPFLSRTLLGSHGQELLIE
GTSLVCMKSSSSVVELVMLLCSQEWQNSIQKNAGLAFIELVNEGRLLSHTMKDHLVRVAN
EAEFILSRQRAEDIHKHAEFESQCAQYAAEKRDEEKMCDHLIRAAKYRDHVTSTQLIQKI
VNILTDKHGAWGCSAFSRPREFWRLDYWEDDLRRRRRFIRNLFGSTHSEATLKAAAEHAG
IKAPEEDVLKGKQSIRGSVLGNQNSESELLLEDDDTLSSLEEKDLENLTGPVNLSTSAQL
VAPAVVVKGTLSITAQELYFEVDEEDPSFKNIEPKILAYTEGLHGKWQFTELRAVFSCRY
LLQNTALEVFLANRTAVMFNFPDAATVKKVVHCLPRVGVGTNFGLPQTRRISLASPKQLY
KASNMTQRWQRREISNFEYLMFLNTISGRTYNDLNQYPVFPWVITNYDSEDLDLTLPSNY
RDLSKPIGALNPKRAAFFSERFESWEDEQVPKFHYGTHYSTSSFTQMWLLRIEPFTTFFL
NFQGGKFDHADRTFSSVSRAWRNCQRDTSDVKELIPEFYYLPEMFVNSNNYNLGVMDDGT
VVSDVELPPWAKSPEEFVRINRLALESEFVSCQLHQWIDLIFGYKQQGPEAIRALNVFYY
LTYEGAVNLSSISDPMLREAVESQIRSFGQTPCQLLIEPHPPRSSAMQVTPLMFTEQMQQ
DVIMVLKFPSNSPVTHVAANTQSGLTNPAVITVTANRLFAVNKWHGLTGHQSSSVQDQQY
QLPVEIDPLIANNVGIHRRQISDLLDQSIQVNAQCFVITADNRFILLCGFWDKSFRIYST
DTGKLTQIVFGHLDVVTCLARSESYIGGDCYVLSGSRDATLLLWYWNGKHSSIGENPGTE
FVTPRAILTGHDCEVTCASVCAELGLVISGCREGPCLVHSMNGDLLRSLEGPDGCVRPRL
VLSSTEGHCVIYYDKGHFCVFSINGKLLGHMEVEDNIKAMLLSKDGQYLLSGGDAGVLSV
WQIHDLKQLFTYPGCDAGIRSMAMSHDQRCIITGMASGSIVLFYNDFNRWHHEYQTRY
NT seq
8637 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgcaggtgacagcgctggcaggatccccatcagaggaatccgcatgaagttc
gccgtgctggcggggctcctggaggctggtgaagtctccaatcgggacattgtggagacg
atcttcaatctgctggtcgggggacagttcgatctggagatgaactttatcatccaggag
acggagagcatcatctgcatggtagagctgctggataaatgtgattccacttgccaagct
gaagtgtggagtatgttcacagccgtgctgaagaagagcttgcgaaaccagcaggcctgc
acagaaatcggcctcatccagctggtgcttcagcgcatagaccgggctgacaccatgatc
gcagatctgatggtggacatgctaggtgtgctggccagctacagtatcacagtgaaggaa
ctgaagctgttcttcagtaaactgaaaggagaacaaggccaatggcctcctcatgccgtc
aagctgctgtccgtgttgaagtgcatggctcaaagaattggcccagattcctttttcagc
ttcccagggaagagtgctgcggctgttgcacttccacctattgcaaaatggccataccag
aacggctttaccttccacacctggctgcgcctggaccccatcaataacataaacgttgac
aaggacaagccttatctctactgcttccacaccaggaaaggtttgggctattctgcacac
tttgtgggcggatgtctgattgtgacctctctaaagtccaaagccaaaggcttccagcac
tgtgtgaagtatgactttaaaccccagaagtggtatatggtgaccatagtgtacatctat
aatcgctggaagaacagcgaaatcagctgctatgtcaatggagagttggcgtcatatggt
gagatcacctggtttgtcaacacaagcgatacattcgacaagtgttttctgagctcatca
gagacagcagacgctaaccgtgtgttctgtggtcagatgggggcagtgtatctgttcagt
gaggctctcagtgctgctcagatattagccatctatcagctggggcctggatacaagggc
acttttaagcacaaggcagagagtgacctgatgtttgcagaacatcataagatgctgctg
tatgatggaaagctgtctgccagtatcgccttcacctataatcctcgagccactgatgct
cagctgtgtctggagtcctcccccaaggacagcacctccatctttgtgcactcaccacac
gctctcatgctgcaggacgtcaaagctgtggtgacacactcggttcagagtgccatccat
tctattggaggagttcaggtccttttccccctgtttgcacagctggatttcctccagcac
agcggtgacgagctggacacctccgtctgttgcacactactgtcatttgtgatggagctg
ctgaagggctctgtagctatgcaagagcaggtgctggcctgcaagggctttcttgtcatc
ggttacgcactggagaagtcttccaaagtacatgtgacacgacctgtgctagacattgtc
cttgccttcgcccgttatcttagcaaccttcctactggagttttgctcttgaaacagctg
tgtgaccacatcctcttcaaccctaccatctggattcatgcctcagctaaggtacagctg
cttctctacacctacctggccacagaattcatcagcactgtcaccatctacaacgccatc
cgcagagttggaactgtactgcaaatcatgcacacactcaaatatttctactgggttgta
aacccactggaccgcagcggaatcacgcccaagggtcttgatgggccaagacccaatcaa
aaggagattcactctctccgagcattcctgctgctgtttgtcaaacaacttatcatgaag
gatcacgacgtgaaggaagatgaactgcagagtattctgaactacctgctcacaatgcac
gaggatgataatctgatggatgttctccagcttctggtggcactgatgtctgagcaccct
gtatcaatggttcaagccttcgatcagcgaaatggaatacgggtcatctttaagctgctc
gcatccaaaagtgaagggattcgtgtgcaggcactcaaagtcttgggctactttctcaaa
tatttgtcaccaaagacaaagtcagaggtcatgctggctcacggcctgttctctctgctc
actgaacggttgatgctccactcaaaccagttcacagtcacaacatacaacgtgctgttt
gagattcttacggagcagatctgtactcaggtcattcacaaacagcacccagaccccgat
tccactgtgaagattcaaaaccctcagatcctaaaagtgatagctgctcttttaaagaac
gcttctccaggagcagaaagcatggaagtacggcgtatcttcctctcagatatgatcaaa
ctcttcaacaacagccgagagaaccgcaggagtcttttgcagtgctcggtgtggcaggag
tggatgctgtctttgtgctttataaaccccaagaacagcgaggagcagaagatcacagag
atggtgtacgccatctttcgcatccttctttatcactccattaagtatgagtggggtggc
tggcgcgtgtgggtcgacacactctccattacgcattccaaggtcacctttgagcaacac
aaagagaatctggcccacatgttccttgagtaccagcggatgggttctgagggaggatct
gaaagcagaatcagaactgtatctggatccagtcacgattctcagttccttgcctcaacc
aatggtgagctgaatgctgacgagacggctccatctacagtaattgagctacgtattgag
gagaaggtcactgatcagcctggagacaatgaggaaaacagggcccagatcccagtcaca
gtgtccaacattctggccagagatgaggaagagagacagacagacaccattgccacctca
ccagagacaaagaaaggggataaaggtgaacaggacactacgaaagaaccaggaaaggat
actgaagtgcaaaatatggaggctaacatggatggagagcatgcgagagtggaaagagtt
gaggctgacatcacaatgactgaaggtagggtaaatgagaaggaaagagctgatctgagt
gtaacagatgatgcggaaaataatcagactgcaaccgacaaggatgccaaagttgaaact
gaagctgtgaagatatcagatgaagatgatggtaaaacaagcactgctgaaactgtacta
cattttcaagtagaagataaagaaaaaagacctggagattcttctcctgaagctgtaaat
gaagctaaagtggaagaaagttctgaggcttcggcaaaccaggagaccagcaaaactggg
gcctccatcacgaatgaagatagcacagatgtttcctcagtcagcaacttagtgaaggtc
agtgatgacagcacggaggagtcttcttttgtttcagctgcagcgagtgagactgatgac
aatggtgctgaaaaggaagacgatgggaaagagaaagaaaagaagctggaaaccaaaaaa
gatgagaagccattacaaaatgagaaagtagaggaaaccaaggctgaaccagctcccatg
gtggaggtggatttaaaccaaagcacctctatcgatgagaccaagcttcacacagagact
atagctggtcatggtgctgttgaggctgagcaaaccccagaagtacttcctccagatttg
tccaaggtgtctacggcagaggttagcccttgcactgagagtatctcacaggatccagga
actaaccaagacactctgaaggcagcagggactgagacctcagcaactaaaaccaaagag
attaaaattgctagactggatgtgtcaagtgtggcctcagacacagagagattggagctg
aaggacaactcaacaacaaatctgagcgcaaatcaagcagctgcctcaagcccctcaggt
cagggcaatgagggctcgtcttcggcacggcccactatgttccgtatcccagagttcaag
tggtctcatatgcaccagcgccttttgactgacctgatgttctctattgagactgatgtg
cagatgtggagaagtcattcaactaagacagttatggactttgtgaacagcagtgagaac
gtagtgtttgtgcacaacactgtccatctagtctctcaggtggtggacaacctcatcatg
gcctgtggaggaatccttcctctgctgtctgcagccacctcttctacgcatgagctggag
aacattgagccatctcagggtttgtctgtggaggcgtcactgatgttcttgcagaggctg
atcagtctcgtggatgtgctaatcttcgccagttcactcaacttcacagaaatcgaagca
gagaagaacatgtcctctggaggaatcctaagacaatgcctacgtttggtgtgcacgatg
gctgtgagaaactgtctggaatgtcagcagcacaccctgggtaagtctggtgcagagagc
agccgtggacagcaaagccttctgggagccgccaagtctataccagcacagagtcctgtg
gacattgtgacaggagggatgtctcctatcagagatttagaccggcttctgcaggacatg
gacatcaatcgtctccgtgctgtagtgttcagagatatagaggacagtaaacaggctcag
ttcctggccctggcagtggtctacttcatctctgtactcatggtatctaaatatcgagac
atccttgagccatacaatgacaaaagacatgcccagtgctcacagtctgtcaggagcaca
gagagtgttcagtctgatcttgagaacggtttgtctccccatcgccggtactctagtatt
gaggatgggaagacctcagtcatcaccgaggcacagactggcccagatgctgtatccgaa
gccctgtctactttgtcctctgaagtcaggagaggtcaatatgtcactgatattgacagc
aaaggaaaaaatgttaatgtcaaggatattttgagaagtctcgttagtgcaccctctgat
gacatcatagtggaccctagcctcataccgcctgggtttctgggtgcagtgggcgatgct
tcccgtgaccagtccgtccagttccactcttttgacaggagtgttgttgtggcacccaag
agaatgggtgaggctccctcaccaggaatgagtacagtctccgcagctgcatccgtccca
tcagccactgctgcatcctcagatggaactccagtcaacagtgtgtcagtggtgtccgca
ggagaaactattgagagcacagagtctgccccaggaggaaccgccaccagctccaatttg
ccatctgtccctgctttatccccagtgacccagagctctgcccccaacatgagtatctca
gagaggttggaacatgctttggagaaggcagctcctttactccgagagattttcgtggat
ttcgcaccattcctctctcgcacattgctgggcagtcatggacaggagctgctcatcgag
ggcaccagtcttgtgtgtatgaagtctagcagttctgtggttgaactggtcatgctgctg
tgttctcaggagtggcagaattccatccagaagaacgcgggcttggccttcatcgagctt
gtgaacgagggcagactgctgagccacaccatgaaggaccatctggtgcgtgtagctaat
gaggccgagttcattctgagccgccagagagcagaggacatccacaaacacgcagagttt
gagtctcagtgtgctcagtatgccgctgagaaacgcgatgaagagaagatgtgcgatcac
ctgatcagggccgccaagtaccgggatcacgtcacatccacccagctcatccagaagatt
gtaaacatcctcacagataagcacggtgcctggggctgctctgcgttcagcagaccgcgg
gagttctggcgcctggactactgggaggatgacctgaggagacgtcggcgcttcatcagg
aacctgtttgggtccacacactctgaggccacgctcaaggctgcagcagagcatgctggt
attaaagctccagaggaggacgtgctgaaaggcaaacagtccatcaggggttcagtgctg
gggaatcagaactcagagagcgagctgctcttggaggacgatgacactctctcatcctta
gaggagaaagatttggagaacctcacagggcctgttaacctgagcaccagcgcacagctg
gttgcgcccgctgtggtggtaaaaggcacactgtctatcacggcccaggagttatacttt
gaggtggatgaagaagacccgagttttaagaacattgaacccaagattttggcctacaca
gagggtctgcatgggaaatggcagttcacagagctcagagccgttttttcttgccgctat
ctgctacagaatacagcgctggaggtcttcttggccaacagaacggcagtcatgttcaac
ttcccagatgcggccacagtgaaaaaggtggtgcactgtctccccagagttggagtcggc
acgaattttggccttcctcagaccagacgaatttctctggccagtccgaaacagctttac
aaggcctccaacatgacccagcgctggcaaagacgagagatctccaactttgagtacctc
atgttcctcaacaccatatctggccgtacatataacgatctgaaccagtatcctgtgttc
ccctgggtaattaccaactacgacagtgaagatctcgacctcactctgcccagcaactac
agagatctatccaagcctattggtgcactcaacccaaagagggctgcattcttttctgaa
cgttttgaatcatgggaggatgagcaggtgcccaaattccactacggcacacactattcc
acctccagctttactcagatgtggctactcaggattgagcctttcacgacgttcttcctg
aatttccaaggtgggaaatttgaccacgcagatcgcactttctcttcagtgtccagagcc
tggagaaactgccagagggacacgtctgacgtgaaggagttgatccctgagttctattac
ctcccagagatgtttgtcaactccaataattacaacctgggagtgatggatgatggaacg
gtggtgtcagatgtggagctgccgccctgggccaagagtcctgaggagttcgtacggatc
aaccgactcgctctggagagtgaatttgtgtcctgtcagctgcatcagtggattgatctg
atatttggatacaagcagcagggacctgaggccatcagagctctcaatgtcttctactac
ctgacttatgaaggagcagtcaacctcagctccatatctgaccccatgcttagagaggct
gtagagtctcaaatcagaagttttggacagacaccctgccagctgctaattgagccccac
ccgccacgcagttctgccatgcaggtgaccccactgatgttcacagagcagatgcagcag
gacgtcatcatggtactcaagttcccgtcaaactcgcctgtcacccacgtggccgccaac
acacagtcaggcctaaccaacccagcggtcatcacagtcaccgccaaccgcctcttcgct
gtcaacaagtggcacggccttactggtcatcaaagctcttctgtgcaggaccagcagtac
cagttaccggttgagattgaccctttgatagccaataatgtgggcattcacagaaggcag
atctcagatctgttagatcagagcatccaggtaaatgctcagtgttttgtcatcacggct
gacaaccgcttcatcctgctgtgtggcttctgggacaagagcttccgcatctactccact
gatacaggtaaactgacacagattgtgtttggccatcttgatgtggtgacctgtctggcc
cgctcagagtcatacattggtggagactgttatgttctgtccggctccagagacgccaca
ctactgctctggtactggaacggcaagcacagcagcatcggagagaaccctggaacagaa
tttgtgactccccgggcaattctgacgggtcatgattgtgaagtcacgtgtgcaagtgtg
tgtgcagagctgggactggtcattagtggctgcagagagggtccatgtcttgtccactct
atgaacggtgacctgttgaggtctctggagggtccagacggctgtgtgcgaccacgtttg
gttctgtcctccaccgagggtcactgtgtcatttattatgacaagggccacttctgtgtg
ttcagcatcaatggaaaactgttgggacatatggaggtggaagacaacatcaaggcgatg
ctgctaagtaaagatggacagtatctgctgtctggaggagatgcaggagttctcagcgtg
tggcagatccatgatctcaaacagctcttcacttacccaggatgtgatgctggaatacgc
tcgatggctatgtcacatgaccaaagatgcatcatcactggaatggcgtctggtagcatt
gttctgttctacaatgacttcaacagatggcaccatgaataccaaactagatactga
DBGET
integrated database retrieval system
