Sinocyclocheilus rhinocerous: 107745897
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Entry
107745897 CDS
T04916
Name
(RefSeq) homeobox-containing protein 1-like isoform X1
KO
K24885
homeobox-containing protein 1
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srx03000
]
107745897
Transcription factors [BR:
srx03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
107745897
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
AbiJ_NTD3
HTH_31
DUF494
HTH_26
HTH_37
RAP1
Motif
Other DBs
NCBI-GeneID:
107745897
NCBI-ProteinID:
XP_016415419
UniProt:
A0A673FNW3
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MSHYTDEPRFTIEQIDLLQRLRHTGMTKPEIVHALDTLERLDREHGDKFSRRGPSDSNAT
NSTTSSTTPTSNNTSNATMATSSTTSTATQTQFHGNLSPSPSNSYATSPPAVLPSPVSLV
AMAQNGRDALAATPNGKLSPNRYPVNSAAAVRSYGLEGSEEDLDIDDKVEELMRRDGTLV
KEEIKAFLGNRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFYRWYQLEKTTPG
ATLNMRPTPVSLDEMEWRQTPPPISSAPGSFRLRRGSRFTWRKECLAVMESYFSDNQYPD
EAKREEIANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIGSFFQEATIL
ESHGIDVQSPGGHSNSDDVDANDYNEQGCDVTYFEKRGVNRPFGYYRLEPTSPTQDDAGN
HADHQDPISLAVEMAAVNHSILALSHPGGGASEIKTESLDDD
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtctcactacacagatgagccacgcttcaccatcgaacagatcgacctgctgcagaga
ctgcggcatacaggtatgaccaaacccgagatcgtgcacgcactggacaccctggagcga
ctcgaccgtgagcacggggacaagttcagccggcgcggcccgtcggactccaacgccacc
aacagcaccacctccagcactacacccacctcaaataacactagcaacgccaccatggcg
acctcctccaccacctccacagcaacgcaaacgcagttccacggtaatttatcgccgtcg
cccagcaacagttacgccacgtctccacccgccgtcttaccctcgccggtctctctggtt
gccatggcgcagaatgggcgggacgctttggcggcgacgcccaatgggaagctgtcgcca
aaccgttacccggtgaacagtgcggcggccgtgagatcgtatgggctggaggggtcagag
gaggacctggatatagacgacaaggtggaggagctcatgaggcgagacggcaccctggtg
aaggaggaaatcaaagcctttctgggcaacagacgcatctcacaggccgtggtggctcag
gtcacaggcatcagtcagagcagaatctctcactggctcctccagcagggctcagatctc
agcgaacagaagaaacgagctttctatcgctggtaccagctagagaagacaacaccaggt
gccacattaaatatgcggcccacccctgtatctctggatgagatggagtggcgtcagact
ccgccccccataagctccgcccctggaagctttcgtctgcgccgaggcagtcgattcacc
tggaggaaggaatgtcttgctgtgatggagagctatttcagtgataatcaatatccagat
gaagccaaacgagaagaaatcgccaacgcctgcaacgctgtcattcagaaaccaggaaag
aagttgtctgacttggaaagagtcacatcattgaaagtctacaactggtttgccaaccga
cgcaaagagatcaagaggagggccaatattgggtcttttttccaagaagccacaatcttg
gagagtcacgggatcgatgtgcagagtcccggaggacactccaacagcgacgatgtcgac
gcgaacgactacaacgagcagggttgtgatgttacctattttgaaaagagaggtgtgaac
agaccctttggttactaccgtctggagcccacctcaccaacacaggatgacgccggcaat
cacgcagaccaccaggaccccatctctctcgccgtggagatggcagctgtcaatcacagc
atcctcgccctgtcccatccgggaggcggggccagtgaaatcaagacagagtcactggat
gacgactga
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