Sinocyclocheilus rhinocerous: 107746016
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Entry
107746016 CDS
T04916
Name
(RefSeq) TBC1 domain family member 1-like isoform X1
KO
K18341
TBC1 domain family member 1
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
srx04131
]
107746016
Membrane trafficking [BR:
srx04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
107746016
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
107746016
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
107746016
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3350
PID
DUF3450
Shugoshin_N
DUF2594
Pept_S41_N
Motif
Other DBs
NCBI-GeneID:
107746016
NCBI-ProteinID:
XP_016415539
LinkDB
All DBs
Position
Unknown
AA seq
1289 aa
AA seq
DB search
MIRSMEGICFEVKTRDDPIKAHPLCAQTLPGSEDKRKKEEEEEEIQYMLTLVGSLAIHPL
TTMAMLPWVVAEIRRQRLGEKNRNLEFNGAHSPEVRDQPVVLKISSSKVCCILETAGPGK
PWDPLQHMVLFDHKPHRITKLIHNSQEPSYFGCLLREEKKAACYVFRCQDYMKVPEIIST
LRQAGKSSARQEDTPSLLPSNGQPDASCSTAMTADAATAFAKKFEVLFCGRVVVAHKKAP
PALIDECIEKFGRVSVTGSLAAGIRRAFSLSQVVNGTNEGADGGGKRPLFLKRDQTFPFL
QALDENGLSPELQRRAADGATGVQPTSLQENRTMLFTIGCSQIFLVSPDTKKVAIEKSFR
EISFCSQGIRHVDHFGFICRESVECGGCQFVCYVFQCANEALVDEIMLTLKQAFSVAALQ
QNSRTQSQQCDSCPLQQLHKLCDRIEGLHPSKAKLELQKHLAGLDNQEQAAVFESTMKAR
PKSDQEGNELIVSCLRQLYEERQKTHTHTHNGQTKKTSQEVAVNVESSISLSRVRLEELK
TRAKRSLTESLEGIWKGSSKSKSQRENSEGESNSSSSTTLNSTNQETSLEEPLCSFLPSS
PLRSHNSTGDLKRLEGSVGGQEGPESPPQGFRRRASTISHSPMLSSSDLSLPPLQPTAAT
KPKLVRHYSVSTDSPHQSNPSSPPASSSPVCQRPLRPRTFALDHSTRPLKRSPSGLSGFR
ARLHSSSSVPNFLKFLAPVVESDDTSDSQKKSDVAALSSPGVVCVVGDDSPLRNRRHSWR
QQIFLRVATPQKGSDSKDSTLEVGSRMALGGGVGGGDSTLGAVPEERRKRSGAELRELWR
KAILQQILLLRMDRENQKLQASESDLQCRRLKLDYEEITPCLKDVTLVWERMLNTTGRSK
VRFATEEIHTAVGQGVPRQHRGEIWKFLSEQYLLRQEVPGAKPPNSDTPYKELLKQLTSQ
QHAILIDLGRTFPTHPYFSAQLGAGQLSLYNLLKAYSLLDPEVGYCQGLSFVAGVLLLHM
SEEDAFHMLRFLMYDMGLRKQYRPDMIILQIQMYQLSRLLHDYHRELYDHLEQYEIGPSL
YAAPWFLTAFASHFPLGFVARVFDILFLQGSEVIFKVALSLLGSHKPLILQQDNLESIVE
FIKTTLPNLGLVQMEKTINQVSEMDISKQLQAYEVEYHVLQDELLDGPSTLSQSQRVAQL
EKTNGSLRQQNLDLLEELQIAHAKIRWLETRVDGLVNREAELQSEVKTLQQERTELQQTA
SNFRDLLSSLGINSPCPDQENLTNTSNNQ
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atgattaggagcatggagggcatttgttttgaggtcaaaaccagagatgacccaatcaaa
gctcaccctctctgtgcccaaacacttcctggatcagaggataagaggaagaaagaggaa
gaggaagaggagattcagtacatgctaactctggttggatctttggccatccatccactg
accaccatggcgatgctcccctgggttgtggctgagatacggaggcagcggctgggggaa
aagaacagaaaccttgaattcaatggtgctcactctccagaggttcgagatcagcctgtg
gtgctgaagatctcatccagtaaagtctgctgcattctggagacggcaggcccggggaag
ccatgggacccattgcaacatatggttctgtttgatcacaagcctcatcgtatcaccaaa
ctcattcacaacagccaagaacccagctattttggctgtctgctcagagaggagaagaaa
gcagcctgctatgtattccgctgccaggactacatgaaggttccagagattataagcact
ctcaggcaggctggcaaaagttctgcccgacaagaagacactccctcattgctgcctagc
aacggtcagccagatgcctcctgctccacggcaatgacggctgatgcagcaacagccttc
gcgaagaagtttgaggtgttgttctgtgggcgagtggtggtggcccataagaaagcacca
cctgcactgatagatgagtgtattgagaagtttggacgtgtcagcgtcacaggatcacta
gcagcgggcatcagacgggcattctcactcagtcaggtggtgaatggaacaaacgaggga
gcagatggaggaggaaagcgacctctgtttttaaaaagagatcagacttttccgtttctg
caggcattggacgagaacggcctctcaccggagctccagcgacgggcagcagacggagcc
actggggtccaacccactagcctacaggagaacagaaccatgctgttcacaattggctgc
tctcagatctttcttgtgagtcctgacactaagaaggtggccatagagaagagcttcaga
gagatttccttctgttctcagggaattcgtcacgtggaccacttcggcttcatatgcagg
gagtctgtggaatgtggaggttgccagtttgtttgctatgttttccagtgtgctaacgaa
gctctggtggatgaaatcatgttgactttgaagcaggcgttctcggtggccgccctccag
cagaacagtaggacccagagtcagcagtgtgacagctgtcccctgcagcagctgcacaaa
ctgtgtgacagaatagagggtcttcatccatccaaagctaagctggaactgcagaagcat
ttggcaggtctggacaatcaggagcaggcagctgtatttgagagcaccatgaaagccagg
cctaagtcggatcaggaagggaacgagttgattgtgtcatgtctaagacaactgtacgag
gagagacaaaagacacacactcacacacacaacggacaaacaaaaaagacttcgcaggag
gttgctgtgaatgttgaaagcagtatcagtttgagtcgtgtgcgtctggaggagctcaag
actagagcaaaaagatccctcacagaatcactggaggggatctggaagggcagcagtaag
tccaaatcccagagggagaacagtgaaggagagagcaactcctccagctccaccacactg
aacagcacaaatcaggaaacatcattggaggagcccctctgctctttccttccctccagt
ccactccgctcccacaattccacaggggatctgaagcgtctagaaggctcagtgggaggt
caggagggtcctgagagcccgcctcagggttttaggagacgcgcaagcactattagtcac
tctcccatgctgtcgtcctctgacctgagcctccctcctctacaacctactgccgccacc
aagcccaaactagtccgacactactccgtcagcacagattccccacatcagagcaatcct
tcctcccctccggcttcttcctctcctgtgtgtcagcggcctttgaggcctcgtactttt
gctcttgatcattctacccggcccctcaagcggagtccatcagggctgagtggctttaga
gcgagattacactcctcctcctctgttccaaatttcctcaaatttctggcccctgtagtg
gagagcgatgataccagtgactctcagaagaagagtgacgtggcggccctgtccagtcct
ggagtggtgtgtgtcgttggggatgacagtccattacgtaaccggagacactcctggaga
caacagatcttcttaagagtcgccacaccacagaagggctcagactccaaagattccact
ttagaggttggcagcagaatggctctgggaggtggagttgggggcggggacagcaccctg
ggggcggtgccagaggagaggagaaagaggagtggggcggagctaagagagctatggagg
aaagcaattcttcaacagattctcctgctgcggatggacagagagaaccagaaactacaa
gcatcagagagtgatctgcagtgcagacgactgaaactggactatgaagagatcactcca
tgtctgaaagatgtcactctggtctgggagagaatgctcaacaccactgggaggtcaaag
gtcagatttgcaaccgaggagatccacacagcagtgggacaaggcgttcctcggcagcat
cgaggagagatttggaagtttctttcagagcagtatttgctgaggcaggaggtgcccggc
gccaaacctccgaacagtgacactccttacaaagagcttctgaagcagctcacatcccaa
cagcatgccatcctcatagacttgggacgtacatttcccactcatccgtatttcagcgct
cagctgggtgctggccagctttctctctataatctactgaaggcatattctctgctggac
ccagaggtgggttactgccagggcttgagttttgtggccggcgtgttgctactccatatg
agtgaggaggacgcattccacatgctcagattccttatgtacgacatggggctgcggaaa
cagtacaggcccgatatgatcatactgcagattcagatgtatcagctgtctcgtctgctg
catgactatcacagggagctctacgatcatctggagcagtatgagatcggccccagtctc
tatgccgctccctggttcctcaccgcctttgcctcacacttcccacttggattcgtggca
cgagtgtttgacattctgttccttcagggatctgaggtcatcttcaaggtggctttgagt
cttcttggtagccacaagccactgattctccagcaagacaatcttgagtcaattgtggag
ttcatcaaaacaaccttacccaatctcggccttgtgcaaatggaaaaaacaatcaatcag
gtgtctgagatggatatcagtaaacagctgcaggcctatgaggtggaatatcatgttctt
caggacgagctcttggatggtccctccactctcagccaatcacagcgggtggcccagttg
gagaagaccaatggaagcctccgacagcaaaacttagacctcctagaggaacttcagatt
gcccacgcaaagatcagatggctggagactcgtgtggatggcctggtgaatcgagaggcg
gagctacagtcggaggtaaagactctccaacaggaacggacagagctgcagcagactgca
tccaatttcagagatctcctcagcagtctgggtataaacagcccctgccctgaccaggaa
aacctcaccaacacaagcaacaaccagtaa
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integrated database retrieval system
