Sinocyclocheilus rhinocerous: 107746118
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Entry
107746118 CDS
T04916
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx02010
ABC transporters
srx04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
107746118
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
107746118
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srx02000
]
107746118
Transporters [BR:
srx02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
107746118
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
DUF7447
Motif
Other DBs
NCBI-GeneID:
107746118
NCBI-ProteinID:
XP_016415699
LinkDB
All DBs
Position
Unknown
AA seq
2226 aa
AA seq
DB search
MTVSTQLGLLLWKNFTSRRRQTIQLLIEIIWPLFIFFILISVRLHYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRYPTPGETPGVVGNFNDSIISRLFIDAKKILLYSQHDK
SFEGFKGLVRALRKLQRNTEGFKLKDFLRDNETLSVFLEKNATLPKHAVIQIVEANVNLE
KVLIKGFSVHLRDLCNSTSLEDFVTIADKDVSQLTQNIICQSSAEWLNNAESHFLSNLDF
LKPIRKDVKSDPKIIQDVSIATDSLLESLGALAVELVSMKSWRDMRNEILYLTGNSTQSP
KHMYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGNYGNDSDSEPVSVYDNSSTPYC
NSMMKGLESSPISRMIWRALKPLLMGKILYTPDTPATQRIIQEVNKTFQEFGVIRDLGGM
WEEMRPKIWNFMENSEEMDLVRTLLQNNASSRFFNAKLSGTDWCVEDVSSFLSKASEDMR
PHGSAYTWREVFNETDQAIQTISRFMECVNLDKLEPVANEERLVNKSMHLLDDRKFWAGI
VFPDMQANTSDLPPNVNYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYIWGGFSYL
QDVIEHGIIRALTGSKEKTGVYIQQMPYPCYVDDIFLQVMSRSMPLFMTLAWMYSVAIII
KGVVYEKEARLKETMRIMGLDNGILWLSWFISSLIPLLISAALLVLILKMGNLLPYSDPG
VVYLFLASFAVVTIMQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYIGFGAK
VVVLLTTSISLMLFDSVLYAIMTWYIEAVFPGQYGIPRPWYFPFTKSYWCGEKCGWITTT
PTNKKENAEAVCIEEEPAHLDPGVYIENLVKVYSNGKLAVDGLTLGFYEGQITSFLGHNG
AGKTTTMSILTGLFPPTSGTAYIQGKDIRTNLNTIRQNLGMCPQHNVLFSMLTVEEHIWF
YARLKGLPEEKVKSEMEQIVMDLGLPHKRKSRTSQLSGGMQRKLSVALAFVGGSKVVILD
EPTAGVDPYARRGIWDLLLKYRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLF
LKTQLGTGYYLTLVKKDFDLSSSSCRTSSSTVSYSKGSLKKEDSVSESSSDAGLGSDHES
ETTTIDVSLISNVIFKHVPTARLVEDLGHEITYVLPYESAKDGAFVELFHEIDDRLTDLG
ISSYGISDTTLEEIFLKVAEDNGVDAEMSDGIIPARRHRRHAFGDHQSCLKPFTEDDFDF
NDSEGDPESRETDWLGGADGKGSYQVKGWSLKRQQFVALLWKRFLYARRSRKGFFAQIVL
PAVFVCIALVFSLIVPPFGKYPSLALEPSMYEEQFSFISNDAPEDRHTNKLLEALMDNPA
YNEQCKDEQNTVSKSCAIKDGEWMVPEVPETVQDIFLKGNWSMENPSPLCECSCEGRKKM
LPECPPGAGGLPPPQIKVTADETLQNLTGRNISDYLVKTYAQIIGKSLKNKLWVNEFRYG
GFSLGARNSQALPSGDEITDAISHIRNRFSLQAGTAADRFLASLSTFIRGLDTKNNVKVS
TLHSDWMCLPGFLNVMNNAVLRANLPPGLDRSKFGIKAFNHPLNLTKEQISQVALMTTSV
DVLVSICVIFAMSFVPASFVVFLIQERVNKAKHMQFISGVQPFLYWLANFVWDMCNYIVP
ATLVIIIFVCFQQEAYVSSTNLPVLALLLLLYGWSITPLMYPASFFFKIPSTAYVVLTSV
NILIGINGSVSTFVLELFGSNEIGGINDILKNVFLIFPHFCLGRGLIDMVKNQAMADALE
RFGENRFRSPLAWDMVGKNLFAMAVEGVIFFCITVLIQYRFCIKARPVSTKLKPIGEEDE
DVARERQRILSGGGHTDILELKQLTKVYKRKQKPAVDRLCVGIPPGECFGLLGVNGAGKT
STFKMLTGDSVVTSGEAYLAGKSVLTEIDEVHQNMGYCPQFDAISDLLTGREHLEFYAIL
RGVPEKEVCEVADWGIRKLGLMKYVDKAAGSYSGGNMRKLSTAMALIGGPPVVFLDEPTT
GMDPKARRALWNCILSIIKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKN
KFGDGYTIILRVAGADPQLQPVMEFIERELPGSTLKEKHRNMLQYQLPSSLTSLARIFNI
LSKNKEQLHIEDYSVSQTTLDQVFVNFAKDQSDEDHLKDINKNDAVVDISHLNAFLVDEK
AKETVV
NT seq
6681 nt
NT seq
+upstream
nt +downstream
nt
atgactgtctccactcagttgggtttgctgctgtggaagaacttcacttcccgacggaga
cagactattcagctgctgatcgagatcatatggccacttttcatctttttcatcttgata
tctgtcagactccactatcctccatacgagcaacatgaatgccactttcccaataaagcc
atgccctctgcggggactttaccatgggtacagggcatcatctgcaacgccaacaacccc
tgctttcgctaccccacacctggagagacccccggggtggtgggcaacttcaatgactcc
atcatctcccgactgttcatcgatgccaagaaaattctcctctacagccaacatgacaag
agctttgaaggtttcaaaggactcgtccgggccttgagaaaactgcagagaaacactgaa
gggttcaagctgaaggacttcctccgtgacaatgaaacgctgtctgtgtttcttgagaaa
aatgctaccctgcccaagcatgctgtgatacagatagtggaggctaacgtcaacttggag
aaggtgcttattaaaggctttagcgttcatctcagagacctgtgcaattccacatctctg
gaggattttgtgaccattgccgataaggatgtgtctcagctgacgcaaaacatcatctgt
caatcatctgctgaatggctgaacaacgcagagagccacttcctgtccaacttggacttc
ctgaagccaatacggaaagatgtcaagtccgacccaaagattatccaagatgtgtccata
gcaacagacagtctgctggagagtttgggagcattagcggtggagcttgtgagtatgaag
agctggcgggacatgcgcaacgagatcctgtacctgacgggcaacagcacgcagtccccc
aagcacatgtaccaggccgtgtcccgcatcgtctgcggtcacccggagggcgggggcctg
aagatcaagtccctcaactggtacgaggacaacaactacaaggccctgttcggtaactat
ggcaacgacagcgatagcgaacccgtctccgtttacgacaactcctccacaccctactgc
aacagcatgatgaagggcctggagtcgagtcccatatcccgcatgatctggagggctctg
aagccactgctcatggggaagatcttgtacaccccagacactcctgccacccagaggatc
atacaagaggtcaataagacgtttcaggagttcggcgtgataagggatctcggcggcatg
tgggaagagatgagacctaaaatctggaactttatggagaacagtgaggagatggacctc
gttcggacccttctccagaacaatgctagttctcgcttctttaatgccaagctgagcggg
acagactggtgcgtggaggatgtgtccagctttctgtcaaaggcttcagaggacatgcgt
ccccatgggtcagcgtacacatggcgagaagtgttcaatgagacggatcaggccatccaa
accatctctcggttcatggagtgtgtgaacttggataagctggagcctgtggctaatgag
gagcgtttggtaaacaagtccatgcatctgctggatgaccgcaagttttgggctgggata
gtgtttcctgacatgcaggccaacacgtctgacctgccgcccaacgtcaactacaagatc
cgcatggacatcgataacgtggagcgcaccaacaagatcaaggacgggtactgggatccc
ggtcctcgagcggacccgtttgaagacctgcgctatatttggggcggcttctcctacctg
caggacgtgattgaacacgggatcatacgagctctgaccggcagcaaggagaaaacggga
gtttacatccagcagatgccttatccctgctatgtggacgacatcttcctgcaggtaatg
agccgctccatgcctctgttcatgactctggcctggatgtactcggtggccatcatcatt
aagggtgtggtgtatgagaaggaagcacggctcaaggagaccatgaggattatgggtttg
gataatggcatcttgtggctgagctggttcatcagtagtctgatcccactgctcatcagc
gccgccctactggtgctcatcctgaagatggggaatctcttgccgtacagtgatcctggt
gtagtctacttgttcctggcctcctttgccgttgtgaccatcatgcagtgtttcttgatc
agcacgctcttctcccgcgctaacctcgccgcggcctgcgggggcatcatatacttcacc
ctctatcttccctatgtgctttgcgtggcctggcaggattacatcggctttggcgccaaa
gtagtagtgcttctcaccacttccatctcgctcatgctcttcgattctgtactgtacgcc
atcatgacctggtacattgaagctgtgtttccaggtcaatatggcatcccacgaccctgg
tatttccctttcaccaagtcatactggtgtggagagaaatgtggttggattacaacaacg
ccgaccaacaagaaagaaaatgctgaagctgtatgcattgaagaagaaccggcccatctg
gatccaggtgtttacatcgagaacctggtgaaggtctacagcaacggcaaactggcagtg
gatggtttgactctgggtttttatgagggtcagatcacctccttcctggggcacaacggc
gctgggaaaaccacaaccatgtctatcctcactggcctgtttccacccacctccggcacc
gcttacatccagggcaaagacatccgcaccaatctgaacactattcgtcaaaacctgggc
atgtgtccgcagcataacgtcctgtttagcatgctcaccgtggaggagcacatctggttt
tatgcacgtctgaagggtttgcctgaggagaaggtgaaatcagagatggagcagatcgtg
atggacctcggcctgcctcataaacgcaaatctcgaaccagccagctctcgggaggaatg
cagaggaagttatcagtagcgctggcgtttgttggagggtcaaaggtcgtgatcctggat
gagcccacagctggagtcgatccttacgctcgccggggcatctgggacctgctgctcaag
tatcgtcaaggacgcaccatcatcctgtccacccaccacatggacgaagctgatatcctg
ggggatcgcattgctatcatctcccacgggaagctgtgctgtgtgggctcctctctgttc
ctcaagacccagctggggacgggatactacctgacgctggtgaagaaggacttcgatctc
tcctcaagctcctgccgcacctccagcagcactgtctcctactccaaaggaagtctcaag
aaggaggacagtgtatctgagagcagttctgatgctggactgggcagcgaccatgaaagt
gaaaccaccaccatagatgtctccctgatctccaatgtgattttcaagcacgttcctaca
gccagactggttgaagatctcgggcacgagatcacttacgttctgccttacgagtcggcc
aaagacggagcatttgtggagctcttccatgagatcgatgaccggctcactgacctgggc
atttctagctacggcatctctgacacaaccctggaggagattttcctcaaagtggcagag
gacaatggtgttgatgctgagatgtcagatgggattatacctgcacgcaggcaccgcaga
catgcttttggtgaccatcagagctgcctgaagcctttcactgaagacgactttgatttc
aatgactcagaaggtgatccagaatctcgtgagacggactggctaggcggcgctgatggt
aaaggttcgtaccaggtgaagggctggagtctgaagagacagcagtttgtagctttgctc
tggaaacgcttcctgtacgcccgacgctcccggaaaggtttctttgctcagattgtgctt
cccgctgtgttcgtgtgcatcgctctggtcttcagtctcattgtccctccattcggaaag
tatcccagtctcgctctggagcccagcatgtatgaggagcagttctccttcatcagcaat
gatgcgccagaggacagacacacaaacaagttacttgaagctctgatggacaatccggct
tacaacgaacaatgcaaagatgagcaaaacactgttagcaaatcatgtgcgattaaagat
ggagagtggatggttccagaggttcctgagaccgttcaggacatattcctaaaagggaac
tggagtatggaaaacccatcgcctctgtgtgagtgcagttgtgaaggaaggaaaaagatg
cttccggagtgtccgccaggagcaggtggtctgccaccgcctcagatcaaagtcaccgct
gatgaaaccttgcagaatctgacaggcagaaacatttcagactacttggtgaaaacatat
gcacagattattgggaaaagcttgaagaacaagctctgggtcaacgaattcaggtatggt
ggattctcattgggtgcgagaaactcacaggccctcccctctggtgatgagatcactgat
gccatctctcacattcgtaaccgcttcagtcttcaagcgggaaccgcagctgaccgcttt
ctggcaagcctgtcgacttttatccgaggtctcgataccaagaacaatgtgaaggtgagt
acactacattctgactggatgtgtttgcctgggttcctcaatgtcatgaacaatgccgtc
ctgcgtgctaatctgccccccggcctggatcggtctaaattcggcatcaaagcgttcaac
catccactcaacctcaccaaagagcagatctcacaggtggcattaatgacgacctcagtc
gacgtgctggtgtccatctgtgtcatcttcgccatgtccttcgtcccggccagctttgtg
gtgttcctcatccaggagagagtgaataaagccaaacacatgcagttcatcagtggagtg
cagcccttcctctactggctggccaactttgtgtgggacatgtgcaactacattgtccca
gcgaccctggtcatcatcatcttcgtctgtttccagcaagaggcctacgtgtcctctacc
aatcttcctgttcttgccctcctgctgttgctctatgggtggtccataacacccctgatg
tacccagcatcattcttctttaagattcccagtacagcgtatgtggttttgaccagcgtt
aacatcctcattgggataaatggcagtgtgtccacgtttgtcctggagcttttcggcagc
aacgagattggtggcatcaacgacatcttgaagaacgtgttcctgatcttccctcacttc
tgtctgggcagaggtctgattgacatggtgaagaatcaagctatggctgatgctctggag
agatttggtgagaatcgattccgctctcctctggcgtgggacatggtgggcaagaatctc
tttgccatggccgtagagggcgtgattttcttctgcatcaccgtccttatccagtaccgt
ttctgcatcaaggccaggccggtcagcactaagctgaagccgatcggagaggaggatgag
gatgtggccagagagaggcagaggatcttgagcggaggaggacacactgatatcctggag
ctcaaacagctcaccaaggtttataagcgaaagcagaagccagctgtagacagactgtgt
gtgggcatcccaccaggagagtgttttgggttgctcggcgtgaacggagctggaaagaca
agcaccttcaaaatgctcacaggagattctgttgtcactagcggagaggcctacttggca
ggaaagagcgtgctgacagagatcgatgaagtgcatcagaatatgggctactgtccgcag
tttgatgccatcagtgatctgctgactggccgagaacatctggagttttacgccattctg
cggggcgtcccagagaaggaagtgtgcgaggtggcagattggggcattcgtaaactgggc
ctgatgaagtatgtagacaaagcagcaggaagctacagcgggggaaacatgaggaagctc
tccaccgctatggcgctcatcggaggaccgccagtggtgttcttggacgaacccaccact
gggatggaccccaaagcccggcgggccctgtggaactgcatcctcagcatcattaaagag
ggacgctcggtcgtcctgacctcacacagtatggaggagtgtgaagcgctctgcactcgt
atggccatcatggtgaacggcaggttccgctgcctgggcagtgtgcagcacttaaagaac
aagtttggtgacgggtacaccatcatcctgcgggtggcgggggccgatccgcagctgcag
ccggtgatggagttcatcgagcgggagctgccgggaagcacgctgaaggagaagcacagg
aacatgctgcagtaccagctgccctcgtcgctgacatccctcgcccgcatcttcaacatc
ctctccaagaacaaagagcagctccacatcgaggactactccgtctcacagaccacttta
gaccaagtatttgtcaattttgccaaggaccaaagtgacgaggaccacttaaaagacatt
aacaaaaacgatgccgttgtggacatttctcacctgaacgccttcctcgtagacgagaag
gccaaagagactgtggtgtga
DBGET
integrated database retrieval system
