Sinocyclocheilus rhinocerous: 107746126
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Entry
107746126 CDS
T04916
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107746126
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srx03021
]
107746126
03036 Chromosome and associated proteins [BR:
srx03036
]
107746126
Transcription machinery [BR:
srx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
107746126
Coactivators
SAGA/TFTC/STAGA complex
107746126
Chromosome and associated proteins [BR:
srx03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
107746126
STAGA complex
107746126
TFTC complex
107746126
SAGA complex
107746126
SLIK complex
107746126
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
TFIID_NTD2
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_Vps41
RMC1_N
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_WDR19_1st
PROPPIN
Beta-prop_IP5PC_F
PEP5_VPS11_N
WD40_like
Beta-prop_WDR75_2nd
Nbas_N
TRIP13_N
Motif
Other DBs
NCBI-GeneID:
107746126
NCBI-ProteinID:
XP_016415709
LinkDB
All DBs
Position
Unknown
AA seq
526 aa
AA seq
DB search
MKRVRTEQIQYTVTQYLKRRQYIDTDGSLKGAKLSQSAEEMAASLTVQTESSCANVVSAA
PCQSVPQQYETQFSRLRSFLQEAEAPLVKEVSGVLFPLFLYLHLDMARCGLKGAVDSFYN
RFHSFFQQDPEQKAMVDLLRGVVTPQDVTSNPKLCSLLDHKYVVHLTDQAYNYLLRYLQS
DDNSAICWALSTHVQVEVTAARRTDYQLYSAGIGAGNTTSTSSSSAAWTAGNGSEGAERV
EVTAGLPQNEAALEALQDCIKRNDEDDSGSEIKTLRAHSGPVYRTAFLTDGSGLLSCSED
STVRFWDLNSFTNTVLYRGHTYPVWDVDVSPCSLYFSTASHDRTARLWSFARTYPLRLYA
GHLSDVDCVKFHPNSNYVATGSTDKTVRLWSTQQGASVRLFTGHRGPVLSLAFSPNGKYL
ASAGEDQRLKLWDLASGSLFKDLRGHTDSITSLSFSQDSSLVASASMDNSVRVWDIRSAH
GSAPTDGSSSELIGQYTGSTSNILNVQFMACNLLLVTGTALEKQEQ
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgggtgcggacggagcagatccagtatacggtgacccagtacctgaagaggagg
cagtatatagacacagatgggtctctgaagggggccaaactctcccagtctgctgaggag
atggcagccagtctgacggttcagacggagtccagctgtgcgaatgtggtgtccgcagcc
ccgtgtcagtcagtcccgcagcagtatgagacccagttctccagactgcgctctttcctg
caggaggcagaagcaccgttagtgaaggaggtgagcggcgtcttgtttccgctcttcctc
tacctgcacctggacatggcgcggtgtggcctgaagggggcggtagactcgttttacaat
cgcttccactcattcttccagcaggaccctgagcagaaagccatggtagacctgctacga
ggagtcgtcacgcctcaggatgtgacctcaaaccctaaactctgctcgctcctggatcac
aagtatgtggtgcatctgacggatcaagcgtacaactacctgctgcgttacctgcagagc
gacgacaacagcgccatctgctgggcgctcagcacacatgtgcaggtggaggtgacagca
gcgcgccgaaccgactaccagctgtacagcgcaggcataggagcaggaaacactacctcc
acttcctcttcctctgctgcatggactgcggggaatgggtcggagggggcggagcgtgtg
gaggtcacggctgggttacctcagaacgaggcggcgctggaggcgttgcaggactgcata
aagcgcaatgatgaggatgactcaggcagtgagataaagaccctgcgcgctcacagcggc
cccgtgtaccgcactgcgttcctgacggacggctccggcctgctgtcctgttcagaggac
tccaccgttcgcttctgggacctgaacagcttcacgaacaccgtcctgtaccgcggccac
acttaccccgtctgggacgtggacgtcagtccctgcagcctgtacttctccacggcgtcc
cacgaccgcaccgcgcgcctctggagcttcgcgcgcacctatccgctgcgtctgtacgcc
ggacacctctccgacgtcgactgcgtcaaattccaccccaactccaactacgtggcgacg
ggctccacggataaaaccgtgcgcctgtggagcacgcagcagggggcgtccgtgaggctg
ttcaccgggcaccgcgggcccgtgctgtcgctcgccttctcgcccaacggcaagtacctg
gcctcggccggagaggaccagagactgaagctgtgggacctggcgtccggcagcctgttc
aaagacctgcggggtcacactgacagcatcaccagcctctccttcagccaggacagcagt
ctggtggcctccgcctccatggacaactcggtgcgggtgtgggacatacgcagcgcccac
ggcagcgcccccaccgacggctccagcagcgagctgattggacagtacacgggcagcact
agcaacatcctcaatgtgcagttcatggcctgcaacctgctgctggtgacgggcactgcg
ctggagaaacaggaacagtga
DBGET
integrated database retrieval system
