Sinocyclocheilus rhinocerous: 107746237
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Entry
107746237 CDS
T04916
Name
(RefSeq) probable ribonuclease ZC3H12B isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srx03019
]
107746237
Messenger RNA biogenesis [BR:
srx03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
107746237
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
KH_N4BP1_1st
Regnase_1_C
UBA_N4BP1_C
zf-CCCH_4
TNFR_ELAPOR1_6th
Omega-toxin
Motif
Other DBs
NCBI-GeneID:
107746237
NCBI-ProteinID:
XP_016415847
LinkDB
All DBs
Position
Unknown
AA seq
1009 aa
AA seq
DB search
MVLELAAPAGAGPALQRCIPHIQRVFRVRVSCSTAESSCESPNAGSSIIVNIEDGKEEDC
TKAKEYIVSLISPVHKHRERLTLWLQRRLHALRAAIEYESCAVVQVRDHALELQGGHVQV
TAACAMLQRLKMEHRGCREPQPLPAAAGHDSPEEEEEEEEEEEAGEDGSSSESDGEARSR
SRRSGGAVSAAGSGEGATGRKQDLLISTKPHRQLCRSSCLDRPSFSQSSTLQELRADDTQ
RAQMPLRQTSDRDYQTKIDFALKLGYSGEQVESVLSKLGSSALINDVLAELVRLGNKGDP
ESQTAMGIAGLMPRAVGAKEAVSPEASLEEDTSDTNDNLRPIVIDGSNVAMSHGNKEVFS
CLGIQLAVDWFLEKGHKDITVFVPAWRKEQSRPDAPIKDQEILRKLEKEKILVFTPSRRV
QGRRVVCYDDRFIVKLACDSDGIIVSNDNYRDLQNEKPEWKKFIEERLLMYSFVNDKFMP
PDDPLGRHGPSLENFLRKRPAVPEHKKQPCPYGQYSKSKKCTYGHKCKYYHPERANQPQR
AVADELRAFAKLSAVKTMSEGALAKCGTSGSANKGDSSSEAKRVAPKRQSDPSIRSVACE
QEERLCPARKAEASSVPSLVSALSVPTMPLTKSHAAGALNTRSASSPVPGSLHFTHSSLE
HAGSIQYPPILVTNSQGASVAYGEPFPKYDSVVSDHGYYSMLSDFSTISLQDSFCSLEQP
EPVGVGGGYPGRASMCPEPGRSHSSDSFSSYSGEMYLNSLEGSLDDSMKGPPSQIQTQPS
AQTRLQAFAHGFHHEALTRVQSYGTDEPKPGPRKQSSAHLAPLSQHPVVCARSSCPGDYP
PVSQNMLPSASPSQQGRSLGMTRMDSISDSRLYESNPLRQRRPPLCREQHASWDPLPCGN
EPYSYGSYGLTGGLMPCCERVMVRSMPEKMEQIWRSPWDSVPPPPLGARGPAEEPQERHP
IPEHQYQTYRNLCNIFPAYVVHLVMEENPHMTDPQQLAAVIVTKLRTCH
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atggttttggagctcgccgcgcccgccggtgcaggccctgcgctccagcgctgcatcccg
cacatccagcgggttttccgggtcagagtgagctgcagcaccgccgagtccagctgcgag
agccccaacgccggctccagtatcatcgtaaacatcgaggacggcaaggaagaagattgc
actaaagctaaagagtacattgtgtcgctgatcagtccagtgcataagcaccgtgagcgt
ttgactctttggctgcagcggcgactacatgccctacgagcagctattgagtacgagagc
tgtgccgtggtgcaggtgagagaccatgcactggagcttcagggaggtcatgtgcaggta
acagctgcatgcgctatgctgcagcgcctgaagatggagcatcgcggctgccgtgaaccc
cagcccttgcccgctgccgccggccacgactctccagaagaagaagaggaggaggaggag
gaagaagaagctggggaagacgggagtagttctgagagcgacggcgaggcacggtcgcgg
agccggagatctggaggagctgtcagtgcagcggggtcaggagaaggagcaaccggaagg
aagcaggacctgctcatatcaaccaaacctcaccggcagctatgccgctcatcctgtttg
gaccgtcccagcttcagccagagcagcaccttacaggagttgcgcgcagatgacacccag
agagcccaaatgcccttgcgtcaaaccagcgatcgagattaccaaaccaaaattgacttt
gctctgaaactgggctactctggagagcaggtggagtctgtgctgagtaaactggggtcc
agcgcactaatcaatgatgtattagccgagctggtacggctagggaataaaggagatcca
gagagccaaacggcaatgggcattgccggtttaatgccacgggcggtgggagccaaagaa
gccgtcagccccgaagcatcgctggaggaagacacatcagacacgaatgacaacctgcga
ccaattgtgattgatggatccaatgttgccatgagccatggaaacaaagaggtgttctca
tgcctgggcattcaactggctgttgattggttcctggagaagggccacaaagacatcaca
gttttcgtcccagcatggaggaaagaacagtcaagacctgatgcgccaatcaaagatcag
gagatcctacggaaattagagaaggaaaagatcctcgtcttcacgccgtctcgcagagtc
caaggccgacgagtggtttgctacgatgaccgttttatcgtcaagctggcctgcgactca
gacgggatcatcgtgtccaacgacaactaccgagacttgcagaatgaaaaaccagagtgg
aagaaatttattgaggaacgactcctcatgtacagcttcgtcaacgacaagtttatgcct
cctgatgatcctttaggcagacatggacccagtctggaaaattttctccgcaaacgacca
gcggttccagagcacaagaagcagccgtgtccttatggtcagtacagcaaaagtaagaag
tgcacgtacggccataaatgcaagtactaccacccagaaagagccaaccaaccacagcgg
gctgttgcagacgagctcagagcctttgccaaactctccgctgtaaagacaatgagcgag
ggggcacttgccaaatgtgggacctctggttctgctaacaagggagacagtagctccgag
gcaaagcgagtggcacccaagcgccagtctgaccctagtatccggtcggttgcgtgcgag
caagaagagagactctgtccagcgcggaaggctgaggccagttcggtaccgtcgttagtt
tcggcgcttagcgttccaactatgccgctgacgaaaagtcacgcagcaggcgctctgaac
acgcgctcggcgagcagccctgttccagggtctctgcactttacccacagctcgctcgag
catgcgggcagcatccaatacccccccatcctagtcaccaatagtcagggcgcctccgtg
gcttacggtgagccattccccaagtacgactctgtggtaagcgaccacggctactattcc
atgctcagtgacttctccaccatcagcctccaagacagtttctgcagtcttgaacagcca
gagcctgtaggggtgggtggaggatatcctggcagagccagcatgtgcccagaacccggc
cgaagtcattcgtcggactccttctcgtcctacagtggagagatgtacctcaactcattg
gagggcagcctggatgacagcatgaaagggccaccgtcgcagatccagactcaaccttcg
gcgcaaacacgccttcaagcctttgctcacggtttccaccatgaggccttgacacgtgtg
cagagctacggaacggatgaacccaaaccgggacctcgaaagcagtcctccgcccacctt
gcaccactctcccaacacccggtcgtctgcgcccgatccagctgcccaggagactaccct
cctgtgtcccagaacatgttgccttctgccagcccttcccagcagggtcggtccttaggc
atgactcgaatggacagcatctctgactcgcggctctacgagagcaatccgctgcgccag
cggagacctcctctttgccgagagcagcatgccagctgggaccctttgccgtgtggtaac
gagccctacagttacggaagctacggattaactggaggcctcatgccttgctgtgaaagg
gtgatggtccgcagcatgcccgagaagatggagcagatctggaggtccccgtgggatagc
gtgccgcctccaccgctcggcgctcgtgggccagcggaggaaccccaagagcggcaccct
attccggaacaccagtatcaaacctaccgaaacctctgtaacatcttcccggcgtatgtg
gtccatttggtcatggaggagaaccctcacatgaccgatccccagcagctggctgccgtc
atcgtcactaaactgcgcacttgccactaa
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