KEGG   Sinocyclocheilus rhinocerous: 107746253
Entry
107746253         CDS       T04916                                 
Name
(RefSeq) autophagy-related protein 16-2-like
  KO
K20868  autophagy-related protein 16-2
Organism
srx  Sinocyclocheilus rhinocerous
Pathway
srx04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:srx00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    107746253
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:srx04131]
    107746253
   03029 Mitochondrial biogenesis [BR:srx03029]
    107746253
Membrane trafficking [BR:srx04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    107746253
 Others
  Specific organelles associated proteins
   Auto phagosome
    107746253
Mitochondrial biogenesis [BR:srx03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    107746253
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 EIF3I WDR55 Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_WDR75_1st ATG16 Beta-prop_NWD2_C Beta-prop_EIPR1 NBCH_WD40 Beta-prop_IFT122_1st Ge1_WD40 Beta-prop_SPT8 Beta-prop_DCAF12 Beta-prop_Nup120_160 PALB2_WD40
Other DBs
NCBI-GeneID: 107746253
NCBI-ProteinID: XP_016415870
LinkDB
Position
Unknown
AA seq 527 aa
MRYPQHWPSLSEDSRTSLKTTTGELAYQVVELQQRIQIKEVTLDEQHTKLYEVQNHLSVL
ASEHSVLQERVAEVQTRNRLLKQEYDSLLEQHRNMESTYRQEKLRSSEILENMILPKQQA
AVRMNHHNEKRVRAREASLHKELQLAASQNVNINEESGNVSPSKPSSPKCESSQRFERSH
GPLFRSASATSPRIISSIRGLFESKIRGKSVCRSEEDLYIPLGVCLVARVPTKAIFTMDA
HELGINAVRFSTSSNLLATGGTDRVIKLWGIEAGTLQNRGTLDGSNEGITSIEFDPTGTR
ILAASYDKSALFWRLEDSVPKLTLTGHSRKVTAARFKYSQRQVVTGSADRTVKIWDLQRA
ACIQTIEVLSFCSDVVCSEYLIISSHYDRKIRFWDSRAGNCTQEVPLQGRVTSLDLCPNH
RQLLSCSRDDILQLVDLRKSNDRVAFRAEGFKCGSDSTKAIFSPDGSFLAAGSADGAIYI
WNVNTGNLEKRLPGMHRASISAVAWSLSGEYVVSVDKSRRAVLWSDI
NT seq 1584 nt   +upstreamnt  +downstreamnt
atgcgttacccccaacactggccctcgctatctgaagattcgcggacgtctctgaagaca
accaccggtgagcttgcgtaccaagtggtggaactgcagcagagaatccagataaaggaa
gtgacactggatgaacagcataccaagctgtatgaggtccaaaaccatctcagtgttttg
gcgtcagagcacagcgtgcttcaggaacgtgtggcagaggtacagactaggaaccgactt
ctgaaacaagaatatgattctctgctggagcagcaccggaacatggagagcacgtaccga
caagagaaactccgcagctcagagatcctggagaacatgatccttccgaaacagcaggct
gctgtccgcatgaaccatcacaatgagaagagagtgagagccagagaggccagtcttcac
aaagagcttcagttggctgccagtcagaatgtgaatattaatgaagagtctggaaatgtg
tcgccttctaaaccatcatcccctaaatgtgagtcttcacagaggtttgagagatcccat
ggaccacttttcaggtctgcttcagctacatccccccgcatcatcagctccatcagagga
ctttttgagagtaagattagagggaaatccgtttgcaggtcagaggaagatctctatata
ccattaggagtctgtctggttgccagagtcccaaccaaggcaatttttacaatggatgca
catgagctgggaatcaacgctgtgaggttcagtaccagttcaaacctgttggctacagga
ggaactgacagagtcatcaaactgtggggcattgaagcaggtactcttcagaacagaggg
acgttagatggaagtaatgaggggatcaccagcattgagttcgatcctacgggcactcgg
attttagctgcgtcatatgacaagtctgctctattttggaggctagaggacagcgttccc
aagcttacattgactggtcattctcgtaaagtgacagcagccagatttaaatacagtcag
aggcaggtggtcacgggcagtgcggacaggactgtgaagatatgggacctccagcgagct
gcgtgcatacaaaccattgaggttttgtctttctgtagtgatgttgtgtgctccgagtac
cttatcatcagcagccattatgacagaaaaatacggttttgggacagcagggcagggaac
tgcacacaggaagtgcctcttcagggcagagtgacatcactggacctctgccccaaccac
aggcagctgctcagctgctccagagatgacatcctgcagctggttgacctgagaaagagt
aacgacagggtggccttcagagcagagggcttcaaatgtggaagtgacagcaccaaggcc
attttcagtccggatggcagcttcctggcagctggctctgcagacggtgccatctacata
tggaatgtgaacacaggaaacttggaaaaacggcttcctggcatgcacagagcttcaata
agcgctgtggcctggtcgttgtcgggtgaatatgtggtaagcgtggacaagagccgtcga
gctgtgctctggagtgatatctaa

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