Sinocyclocheilus rhinocerous: 107746447
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Entry
107746447 CDS
T04916
Name
(RefSeq) protocadherin-18-like isoform X1
KO
K16499
protocadherin delta 2
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
srx04515
]
107746447
Cell adhesion molecules [BR:
srx04515
]
Cadherins
Protocadherins
107746447
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
SIT
Syndecan
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
107746447
NCBI-ProteinID:
XP_016416153
LinkDB
All DBs
Position
Unknown
AA seq
1135 aa
AA seq
DB search
MDTSKGTVFCATLLKLAVLVILARHVSAKTLKYQVYEEQKVGTVIARLREDVADVLSKLP
SSIPLRFRAMQRGSASLLSVRDQDGEISIRTKIDREKLCEKNLNCTIEFDVLTLPTEHLQ
LFHIEVEILDINDNAPQFARPVIPIEISETAAVGTRIPLDSAIDPDVGENSLNTYSLTPS
DFFMIDILTRTDGAKYAELVVLKELDREVRASYELQLTASDRGVPPKFGTTLLKISIADS
NDNNPVFEKPSYVINLLENSPLGSLLIDLNATDPDEGTNGKIVYSFSSHVSPKILETFKI
NSDNGHLTLMRKVDFESTHLYDIDVQAQDMGPNSMPAHCKVIIKVVDVNDNKPDISINLM
STGNEEIAYISETAPVDTFVALVRVDDLDSGLNGEVECRLHGQGHFRLQKTYEKNYMILT
NVSLDREKRSEFSLTVIAEDKGSPSLSTIKHFTVQVQDENDNAPKFEKGRYEISKAENNS
PGAYLSSVRASDPDLGPNGQVSYSILECTVHGSSISTYVTIDPSNGNIYALRTFDREDVS
QISFLVQARDSGSPPLRSNVTIVLTVLDENDNRPVITMPQLWNHTADVPVSKYAEVGDVL
TIVHAIDYDAGSNSDLSCSVVGGNEAGYFAMDAKTCEIRTNVSMQDIPQDHVELTILVQD
HGAQPLSARALLRLSLYENIENHMNPHLTGGGSGDGPLDVSMIIIISLSAICAVLLLIMV
AFALRCSREKKDTHSYNCRVAESTYQQHPKKPSRHIHKGDITLVPTVNGTLPIRAHHHSP
TSSPGPERAHMSSRQSQHSRQSLNSLVTISSNHIPENFALELIHATPPVEQVSQLLSILH
QGQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSDAGDSDCEMGRDSPIDRLLGD
GFGDLFHSDGHQRLHPAVMRLCTEECHVLGHSDQCWMPSQASSDYRANMYIPGEESRPQV
LEEDQQSVDSAKKSFSTFGKDNEEECGSSLLSEINNVFRRLLPTSYAEVSEIEGCAGLPT
SSIGMEIRKGFLPGKASSTGPTYPQGVAVWAANTHFQNPGGAVVSGHGSTNHAASQAHLK
WLPAMEEIPENYEEDDMESVLSQRQGKRNDMRHEVVDASELVAEINKLLQDVCQS
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggataccagtaagggcacagtgttctgtgccactttacttaaacttgctgtgctcgtg
atattggcacgacacgtctcggcgaaaactctgaaataccaagtttacgaagagcagaag
gtgggtacagttatcgccagacttcgtgaagatgtcgctgatgttttgtccaaacttccg
agctcgattccgttacgctttagagccatgcagcgcggcagcgcgtctcttctctccgtg
cgcgaccaggatggagagatcagcatcaggaccaaaatagaccgcgagaaactgtgcgag
aagaatctcaactgcactatcgaatttgacgtcctcacccttcccacggagcacctacag
ctgttccacatcgaagtggaaattctggacattaacgacaatgcgccacagttcgcgcgc
cccgtcattcccatagagatctccgaaaccgccgccgtggggacgcgcattccccttgac
agcgccatcgatccagacgtcggagagaactctctgaacacatactctctgactccgtct
gacttttttatgattgatattctaaccagaaccgatggcgccaagtacgcggagctcgtt
gtgcttaaagagctggatagagaggtacgagcgagctatgaactccagcttaccgcctca
gacaggggcgttcccccaaaattcggaacaacgctcctgaaaatcagcatagctgactcg
aacgacaacaatcctgtgtttgagaagccatcttatgtgatcaacttgcttgaaaattct
cctttaggcagtttgcttattgatctgaatgccactgacccagatgaagggaccaatggg
aaaatcgtatattcttttagcagtcacgtgtcacctaaaattttagagacttttaagatt
aattctgataatggtcatttgacactgatgaggaaagttgactttgaaagcacacatttg
tatgacatagatgttcaagctcaagacatgggtcccaattcaatgccagcacactgtaaa
gtcataataaaagtggtggatgtgaatgacaacaagcctgacattagtatcaatttgatg
tccactgggaatgaggagatagcttatatatcagagacggctcctgtagatacatttgtg
gctctggtgagggtggatgacctggactctgggttgaatggagaggtggagtgccgtctc
catggccaaggtcatttcaggctgcaaaagacatatgagaagaactacatgatccttaca
aatgtcagtttggaccgagagaagaggtccgagttcagcttgactgttatagctgaagac
aaaggctctccaagtctgtcaaccatcaaacacttcactgtgcaggtccaggatgagaat
gacaacgcgccaaagtttgagaagggcaggtatgagatttccaaggcagagaacaactca
ccaggagcttatctgtcatctgtgagggcctcagatccagacctgggcccgaatggtcaa
gtgagctactctatacttgaatgtacagtccatgggagctccatctccacttacgtcacc
attgacccctctaatggaaacatttatgcactacgtacttttgatcgcgaagatgtgagt
cagatctcgttcttagtccaggcccgggattctggaagtcctccactgcgtagtaatgtg
accattgtgttgactgtcttggacgagaacgacaacagaccggtcatcacaatgcctcag
ctgtggaaccacacggctgatgttccagtatccaaatacgcagaggttggtgacgtgtta
actattgtccacgcgatagactatgatgccggctccaatagtgacctttcgtgttctgta
gtagggggcaatgaggcaggttacttcgctatggatgctaaaacatgtgaaattcggacc
aacgtcagcatgcaggacattccacaggatcacgtggagctgaccatcctagtgcaggac
catggtgctcaacccctcagcgccagagccctactaagactttcgctttatgaaaacatt
gagaaccacatgaacccccatctgacaggtggaggaagtggagatggccctctagatgtg
tccatgatcatcatcatctcccttagtgcgatctgcgccgttctgcttctcatcatggtg
gcctttgcccttcgctgctcacgtgaaaagaaggacactcactcatacaactgcagggtg
gctgagtctacttaccaacagcaccctaaaaagccctcacggcatatccacaagggcgac
atcaccctggtgcccaccgtcaacgggaccctcccaatccgggcacaccatcactcacca
acctcctcgcccggacctgaacgggcccacatgagcagccggcagagccaacacagccgc
caatcactgaacagcttggtcactatttcctccaatcacatccctgagaacttcgccctg
gaacttatacatgccacgccccctgtggagcaagtctcacagctcctttcaatactccat
cagggtcagtatcagccgcggcccagcttcagagggaacaaatactctcgcagctacagg
tacgccctccaggacatggataagttcagtctgaaagatagtgggcgtggcgacagtgat
gcgggcgacagcgactgcgagatgggccgtgattcgcccatcgaccggttgctaggcgac
ggcttcggagacctcttccacagcgacggccaccagcgtctccacccagcagtcatgaga
ttgtgtaccgaggagtgccatgtgttgggtcactctgaccagtgctggatgccatctcag
gcatcttcggattaccgtgcgaacatgtacatccccggagaagagagcaggcctcaggtc
ctcgaggaggaccagcagtcagtcgactcagctaagaagagcttttctacctttggaaaa
gacaacgaggaggaatgcggcagttcgctgctgtcagaaattaacaacgtcttccgacgt
ctcctgccaacttcttacgctgaggtcagtgagattgaaggatgcgctgggttgcccact
tcctccatcggcatggagatcagaaagggcttcctgccgggtaaggcgtcgtctacaggc
cccacctacccgcagggtgttgctgtgtgggcagccaatactcactttcagaatcctgga
ggtgccgtggtgagcggtcacggctcgaccaatcacgcggcatcgcaggcacatttaaaa
tggctgccggcgatggaggagatcccagagaactatgaagaggacgacatggagagtgtg
ctcagccaacggcagggaaaacgcaacgacatgagacacgaagttgttgacgctagcgaa
ctggttgccgaaattaacaaattgcttcaggatgtatgccagagctaa
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