Sinocyclocheilus rhinocerous: 107746538
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Entry
107746538 CDS
T04916
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx02010
ABC transporters
srx04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
107746538
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
107746538
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srx02000
]
107746538
Transporters [BR:
srx02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
107746538
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DrrA1-3_C
AAA_23
MukB
Motif
Other DBs
NCBI-GeneID:
107746538
NCBI-ProteinID:
XP_016416266
LinkDB
All DBs
Position
Unknown
AA seq
2294 aa
AA seq
DB search
MSISTQLGLLLWKNFTYRRRQTLQLLTEIVWPLFIFFILIAVRLNYPPYEQHECHFPNKA
MPSAGTLPWIQGIVCNANNPCFRHPTPGESPGVVGNFNDSIISRLFSDAKKILLYSQNDK
SLDGFKELISAVKVMQNNTAGFKLKDFLRENETLSTFLQQNASFSHNYVQNILKADVNLE
KVLIKGFGVHLRDMCSTTTLEDFVSIPDERVARFTQDLICSAPNSWLDQAERHFKSNLDF
LKPIRSDMRTNATDVRLVAKATDNLLESLGSLAVELASMRSWSDLRNEILFLTENATGSP
SLMYQAMSRIVCGHPEGGGLKIKSLNWYEDSNFQALFGSHNDSDNEPVSVYDNTTTLYCN
NLMKNMEASPISRMIWRALKPLLMGKILYTPHSPATQKILYTPHSPATQKIIHEVNKTFQ
ELGILRDLGGMWEEARPKVWNFMENSEEIDLMRTLLRNNVTASFFSAQLAETQWSVEDVI
SFLSKHSEDTRPHGTAFTWRDVFNETDQAIMSISRFMECVNLDKLEPVSTEEKMVNESMS
LLDNRKFWAGIVFLDIQSNSSELPPHVNYKIRMDIDSVERTNKIKDGYWDPGPRADPFED
LRYIWGGFTYLQDVVEHSIIRAVTGTKEKTGVYIQQMPYPCYVDDIFLRIMSRSMPLFMT
LAWMYSVAIIIKGVVYEKEARLKETMRIMGLDNGILWFSWFISSLIPLLISAGLLVLLLK
MGNLLPYSDPGVVFLFLGSFAVVTIMQCFLISTAFARANLAAACGGIIYFTLYLPYVLCV
AWQDYVGFSAKVIASLLSPVAFGFGCEYFALFEEQGVGIQWNNLFSSPMEEDNYNLTTCL
ILMYFDAFLYGVMTWYIEAVFPGQYGIPRPWYFPFSKSYWFGESNTNNTAVHGKKSNAGT
VCIEEEPTHLELGVYIENLVKVYRHGKKLAVDGLTLGFYEGQITSFLGHNGAGKTTTMSI
LTGLFPPTSGTAYIMGKDIRSELSSIRRSLGVCPQHNVLFSMLTVEEHIWFYARLKSLSE
EDVKAEMEQILTDTGLQHKRKSRTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPY
ARRGIWDLLLKYRTGRTILLSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTQLGTGY
YLTLVKKNTEPSLSSCRNSSSTVSFVKKDDNASESSSDAGLGSDQESEAATAIGTTWPES
PVVPVDVALISSLILKHVPASRMVEDLGHEITYVLPYESAKDGAFVELFHDLDDRLADLG
ISSYGVSDTTLEEIFLKVAEDSGVDTEIISDGTLPVPRHRRHAFGADHQSCLKPLTEDDN
VDCNDSDGDPESKETDYLSVSNGKGSYQLKGWSLKRQQFVALLWKRLLYARRSRKGFFAQ
IVLPAVFVCIALVFSLIVPPFGKYPSLALNPWMYEDQFTFISDDAPHDISTQKLLNALLD
DPGFGTRCMEGEPITDVPCTMGDEEWSTQEVAESVMDIFTSTNWTMDNPSPACECSCNGK
KKMLPECPAGAGGLPPPQIKMSETETLQNLTGRNISDYLVKTYAQIIGKSLKNKIWVNEF
RYGGFSLGARSTQVLPPAEEIDDAISRVREIFQLGKNSGSAANRFLKSLSAFINGLDTKN
NVKIWFNNKGWHSIGAFLNVMNNGILRANLPPGKDHRQFGITAFNHPLNLTKEQLSQVAL
MTTSVDVLVSICVIFAMSFVPASFVVFLIQERVNKAKHMQFISGVQPYLYWLANFLWDMC
NYVVPATLVILIFVCFQQKAYVSATNLPVLALLLLLYGWSITPLMYPASFLFKIPSTAYV
VLTSVNILIGINGSVSTFVMELFGNNEIGGINDILKNVLLIFPHFCLGRGLIDMVKNQAM
ADALERFGENRFRSPLEWDMVGKNLFAMAVEGVVFFIITVLIQYRFFFEPKSLSAKLSPI
GEEDEDVARERQRIMSGAGQGDILELRQLTKVYKRKQKPAVDRLCVGIPPGECFGLLGVN
GAGKTSTFKMLTGDSVVTKGEAFLAGKSILREIDEVHQNMGYCPQFDAINDLLTGREHLE
FYAILRGVPEKEVCEVAEWGIRKLGLVKYLDKKAGSYSGGNMRKLSTAISLIGAPPVVFL
DEPTTGMDPKARRALWNCIHSVIKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSV
QHLKNRFGDGYTIILRVAGPDPDLQPVMKFIESELPGSTLKEKHRNMLQYQLPSSLTSLA
HIFSILAKNKEFLRIEDYSVSQTTLDQVFVNFAKDQSDDPSDSSIRRKETAVNMALLSPL
PAKENMEKPIESFV
NT seq
6885 nt
NT seq
+upstream
nt +downstream
nt
atgtctatctccactcagctgggtctgctgttgtggaagaacttcacctacagaaggaga
caaacgctccaactgctgacagagattgtgtggcctctctttattttcttcatcctgatt
gctgtgaggttgaactacccaccttatgagcaacatgaatgtcactttcccaacaaagcc
atgccctcggcaggcaccctgccctggatccagggcatcgtctgcaatgccaacaatccc
tgcttccgacacccaacccctggggaatctccaggagtcgttggaaacttcaacgattcc
ataatctcacgcctgttttctgatgccaagaagatcttactgtacagtcaaaatgacaag
agcttagatggattcaaggagcttatcagtgcagtgaaagtcatgcaaaacaacacagct
ggtttcaagctgaaggacttcctgcgtgaaaatgaaaccctttccacgttcctccagcaa
aacgcctccttttcccataattatgtacagaatattctgaaagctgatgtgaatcttgaa
aaggtgctgatcaaaggttttggcgtccatctgagagacatgtgcagcaccaccacactt
gaggattttgtgagcatcccagacgaaagggtggcgagattcacccaggacctcatctgc
agcgctcccaatagctggctagaccaggccgagagacacttcaagtccaacttggatttc
ctcaaacctattaggtcagacatgaggactaatgccactgacgtccgtctagttgccaaa
gctacagacaaccttctggaaagcctgggatcactggctgtggagctggccagtatgagg
agctggagtgacctgcgaaacgagatcctgtttctgacagaaaacgccaccggctcgccg
agtctgatgtaccaggctatgtcccgtatcgtgtgtggacacccggaaggcggtggcctc
aagatcaaatccctcaactggtatgaggacagcaacttccaggcgctgttcggcagccac
aacgacagtgataacgaaccagtttcagtctatgacaacaccaccactctatactgtaac
aacttgatgaagaacatggaagccagtcctatctctcgaatgatctggagagcactgaaa
cctctcctgatggggaagatcctctacacgccacacagccctgcaacacagaagatcctc
tacacgccacacagccctgcaacacagaagatcattcatgaggtcaacaagacatttcag
gagctcggaattctacgagatttaggcggaatgtgggaagaagccagaccgaaggtttgg
aacttcatggagaacagtgaagaaatagatttgatgcggacgcttcttcgaaacaatgtc
actgctagtttcttcagtgcccagttggctgagactcagtggagcgtggaggatgttata
agcttcttgtctaagcactccgaggacacgcgtcctcatggaacggcatttacgtggcgg
gacgtcttcaatgagacggatcaggccattatgagcatatcccgtttcatggagtgtgta
aacctggataaacttgaacctgtgagcacagaggagaaaatggtgaacgagtccatgagt
ctcctggataacagaaagttttgggcgggaattgtgtttctggacattcagtccaacagc
tctgaacttcccccacacgtcaattacaagatccgcatggacatcgacagtgtggagcgc
acaaacaagattaaagatgggtattgggatcccggtcccagggctgatccgtttgaggat
ttgcggtatatttggggaggatttacttaccttcaggatgtagttgaacacagcatcatt
agagcagttactgggaccaaagagaagactggtgtttacatccaacagatgccttatcca
tgttatgtagatgatattttccttcgcattatgagccgttccatgccgcttttcatgact
ctggcctggatgtactcagtggccatcatcatcaaaggtgtcgtctacgagaaggaggcc
cggctcaaggagaccatgaggattatgggattggacaatggaatcctgtggttcagttgg
ttcattagcagcctcatccctcttctcatcagcgcaggcctgctggttcttctactcaag
atgggtaatctcctgccctatagtgaccctggcgtagtcttcctcttcctcgggtcattc
gctgtggtaaccatcatgcagtgttttctgatcagtacggcgttcgcacgtgccaacctg
gcagcggcttgcgggggcattatctacttcaccctctacctgccttatgtgctctgtgtg
gcttggcaagactacgtgggcttcagcgccaaagtcattgctagcttactgtctccagtg
gcgtttggatttggctgtgagtattttgccctgtttgaagagcagggtgtgggcatccaa
tggaataacctcttctccagcccaatggaagaagacaactacaacctcaccacctgcctc
atcctcatgtactttgatgccttcctgtatggggtcatgacctggtacattgaggccgtg
ttcccagggcagtatggcattcccaggccatggtacttccctttcagtaaatcctactgg
tttggagagagcaacacaaacaatactgcagttcatggaaagaagagcaatgctggaact
gtctgcattgaagaggaacccactcaccttgaattgggagtttacattgagaatcttgtg
aaggtctaccgtcatggcaaaaagctagcagtcgatgggttgacacttggcttctatgag
gggcaaataacttctttcctaggtcacaatggagctggaaaaaccaccaccatgtctatc
ctaactggcctattccctcccacctctggcactgcatatatcatgggcaaagatattcgc
tcagagctcagttccatcagacggagcctcggagtgtgtccacaacacaacgtcctcttc
agcatgttgacagtagaagagcacatctggttctatgcccgtctgaagagtctgtctgag
gaggacgtgaaggctgagatggagcagattctgactgatactggccttcaacacaaacgc
aagtccaggaccagccagctgtcaggtggtatgcagaggaaactctcggtagcccttgct
tttgttggagggtcaaaggttgttattttggatgagcccactgctggtgtggacccatac
gctcgaagaggcatctgggaccttcttctgaagtatcgtacaggtcggactatccttctt
tccacccatcatatggatgaagcggatattctgggcgatcgtattgctatcatctcccat
ggaaagctttgttgtgtgggctcttcgctctttcttaagactcaactgggaactggatac
tatcttaccttggtgaagaaaaacactgagccttctctcagctcttgcaggaactcgagc
agcactgtgtcctttgttaagaaagatgacaatgcatctgagagcagttcggatgctggt
ctaggtagtgatcaagaaagcgaagccgccacagcaattggaactacatggcctgaatct
cctgttgttcctgttgatgtagccctcatctccagtctaatcctgaagcacgttcccgct
tctcgcatggtggaagacctcggtcatgagatcacatatgtgttgccgtacgagtctgcc
aaagatggtgctttcgttgagctcttccatgacctggatgatcggctcgctgaccttggc
atttcgagttatggtgtctcagatactacacttgaagagattttccttaaggtggcagag
gacagtggagttgacactgaaatcatctcagatggaactctgcctgttcccagacatagg
cgacacgcatttggtgctgaccaccagagctgcctcaaacccctgaccgaagacgataac
gttgactgcaacgactctgacggtgatccagaatccaaagaaacagactatttgagcgtt
tctaatgggaaaggatcatatcaattgaaaggctggagtttgaagaggcagcagtttgtg
gctttattgtggaagagattgctttatgctcgccgctcaaggaaaggcttctttgcacag
attgttcttcccgctgtgtttgtgtgcattgctctggttttcagtcttattgtgccacca
ttcggaaaatatcccagcctggctctcaatccctggatgtatgaagatcagttcacattc
atcagtgatgatgctccacatgatataagcacacaaaagttactcaacgctttattagat
gatcctggctttggaacacgatgcatggaaggagaaccaattactgatgttccctgtaca
atgggcgatgaggaatggtctacacaagaagtggcagaaagcgtgatggacattttcacg
tcgacaaactggaccatggacaacccatcgcctgcttgtgagtgcagctgtaatggcaaa
aagaagatgctcccagaatgccctgctggtgcaggtggactgccacctcctcagattaag
atgagtgaaactgagaccctccagaacctgacgggacgaaacatctcagactatctcgtg
aagacctatgcacagatcattgggaaaagcttaaagaacaagatatgggtgaatgaattc
agatatggaggattttcattgggagctagaagcactcaggtacttcctcctgctgaagag
atcgacgatgccatctctagagtcagggaaatcttccaactggggaagaactcaggatca
gcggccaaccgtttcttgaaaagcctgtctgccttcatcaatgggctggacactaagaat
aatgtcaagatatggttcaataacaagggctggcacagtattggagccttcctcaatgta
atgaacaatggtatcttgcgtgccaacttaccacctggcaaagaccaccgtcagtttggc
atcactgcgtttaaccatccgctcaatctgaccaaggaacagctttctcaagtggcccta
atgaccacctcagtggacgtgctggtttccatctgtgtgatcttcgccatgtccttcgtc
cccgccagcttcgttgtcttcctcattcaggagcgagtgaataaggccaagcacatgcag
tttatcagcggagtgcagccatacctctactggctggccaactttctctgggatatgtgc
aattatgttgttcctgctactctggtgatcctgatctttgtgtgctttcaacaaaaagcc
tacgtctctgcaaccaacctgcctgttcttgcccttctactgcttctttatggatggtcc
atcactcctcttatgtacccggcttcattcctcttcaaaatccccagcaccgcttacgtg
gtgctcactagtgtcaatatcctcattgggatcaatggcagcgtgtccacttttgtcatg
gagttatttggaaataatgagatcggtggcattaatgacatcctgaagaacgttttgctc
atcttcccgcatttctgcctgggtcgaggtctcatcgacatggtgaagaatcaggccatg
gctgatgctctggagagatttggtgagaaccgtttccgttctccattggagtgggacatg
gtgggcaagaatctttttgctatggctgtggaaggagtggttttcttcatcatcacagtc
cttatccagtaccgtttcttctttgaacccaagtctttaagtgccaagttgagtccgatt
ggagaggaagatgaggatgtggccagagagaggcagagaatcatgagtggagctggacag
ggagacattcttgagctcagacaactcactaaggtgtacaagcggaaacagaagcctgct
gtcgatcgtctatgtgtaggcattcctccaggagagtgttttggtctgcttggtgtcaac
ggagccggaaagacaagtacttttaaaatgctgaccggagactctgtggtcaccaaagga
gaagcattcttggctgggaaaagtatactcagagaaatagatgaagtacatcagaacatg
ggctactgccctcagtttgatgccatcaatgatctgctgacaggacgggaacacctggaa
ttctatgccatcctgcgcggtgtacctgagaaggaagtttgtgaggtggcggagtgggga
atccgtaaactgggcctcgtgaagtacttggacaagaaagcaggaagctacagcggtggc
aacatgcgcaaactctccaccgccatatcactcattggagccccaccagtggttttcctg
gatgagcccaccactggaatggaccccaaagcacgacgagcactgtggaactgcatccac
agcgtcatcaaagagggacgctccgtcgtacttacctcacacagtatggaggaatgtgaa
gcgctgtgcaccaggatggccatcatggtgaacggcaggttccgctgtctgggtagcgtc
cagcacctgaaaaacagatttggcgatgggtacaccatcattctgagggttgctgggccg
gatcctgacctgcagccagtgatgaagttcattgagagcgagctgccaggaagcaccctg
aaagaaaaacacagaaacatgctgcaataccagcttccctcctccctcacctccctcgct
cacatcttcagcatcctcgctaagaacaaagagtttctcaggatagaggactactctgtg
tcccaaaccactctggaccaggtatttgttaactttgccaaggaccaaagtgacgacccc
tcagacagctccattcgtcgtaaagagacagcggtcaacatggccctcctgagccctctg
cctgctaaagagaacatggagaagccaatagaaagctttgtgtga
DBGET
integrated database retrieval system
