KEGG   Sinocyclocheilus rhinocerous: 107746727
Entry
107746727         CDS       T04916                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1-like
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
srx  Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:srx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:srx03041]
    107746727
Spliceosome [BR:srx03041]
 Complex B
  Other components
   Complex B specific factors
    107746727
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd WDR55 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR75_1st LisH_TPL ANAPC4_WD40 WD40_Gbeta Beta-prop_VPS8 NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_NWD2_C Beta-prop_SPT8 Beta-prop_ACSF4 Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_Nup120_160 Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Ge1_WD40 Beta-prop_TEP1_C WD40_RFWD3 Beta-prop_NUP159_NUP214 Beta-prop_Aladin Beta-prop_WDR41 Beta-prop_WDR19_1st Beta-prop_NOL10_N eIF2A Beta-prop_EIPR1 Beta-prop_IP5PC_F Beta-prop_WDR35_TULP_N Beta-prop_SCAP PROPPIN Beta-prop_WDR75_2nd VPS8_N DUF7899 Beta-prop_DCAF12 LisH LisH_PAC1 LisH_WDR26 Beta-prop_IFT122_2nd DUF7165
Other DBs
NCBI-GeneID: 107746727
NCBI-ProteinID: XP_016416505
UniProt: A0A673JNV6
LinkDB
Position
Unknown
AA seq 539 aa
MDLEVESADVIRLIMQYLKENNLHRTLAMLQEETAVSLHTVDSIDSFISDINNGQWDIVL
LAIQYLKLPDKLLIELYEQIVLELIELGELGAARCLLKQTDPMIMLKHTQPERYSHLETL
LSKPYFDSQEAYPVDSSKEKRRLAIAQAFAGEVCLVPPSRLMALLGQGRICEGALYRLQE
TKALRQFGSLAMLSLKWQQHQGLLPPGMSLELFRGKGALKDMEEERFPTQLSRLIKFGPK
SHVECARFSPDGQYLITGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDEAVLCLAVSH
DSDMIASGAQNGKIQVWRILNGTCLNRIERAHSKAVTCVCFNKDSSQLLSGSFHQTIRLH
GLKSGKMLKEFRGHTAHINDIIFSHEGQHVISASADGTVKVWSMKTMDCTHTIKTPDIPD
GTDITVNNVVLVPKTPEHFVVCNRTNTVVVTNIHGQVMRSFCSGVREGADFVCCTLSPRG
EWIYCVGEDYVLYCFSTITGKLERTLTVHEKDVVGITHHPHQNLIATYSEDGLLKLWKP
NT seq 1620 nt   +upstreamnt  +downstreamnt
atggaccttgaagtggaatcagcagacgtgattcgtctgatcatgcaatatctgaaggaa
aataatttgcaccgcactctggcgatgcttcaagaggagacggcagtctcgctccacacg
gtcgacagcatcgacagcttcatctccgatatcaacaacgggcagtgggatatagtgctg
ctagcaatccagtatctgaagcttcctgacaagctgctcattgagctgtacgaacagatt
gtgctggagttgattgagttgggtgagctgggagcagcccggtgtttactaaagcagacc
gatcccatgatcatgctgaagcacactcaacctgagcgctactcgcacctggagaccctt
ctcagcaagccatactttgactcacaagaggcatatccagtggacagcagtaaagagaag
cgcagactggctattgctcaagcttttgcaggagaggtctgcttggtgccaccttctcgt
ctcatggctcttctgggccagggccgtatatgtgagggcgctttatacaggttacaggaa
accaaagcactacggcagtttggctcattagcaatgctgtcgttgaagtggcagcagcac
cagggtctcttacctccaggtatgtctttggaactgttccggggaaaaggtgcattgaag
gacatggaggaagagcgcttccctactcagctcagtcgcctcataaagtttgggccaaag
tcccatgtagagtgtgcgcgattctctcctgatggacagtacttgattactggatctgtt
gatggtttcattgaagtctggaacttcaccactggtaaaattcggaaggacctgaagtac
caagctcaggataatttcatgatgatggatgaggctgttctgtgtctggcagttagtcac
gactctgacatgatcgcttctggagctcagaatggaaagatacaggtttggaggattctg
aacgggacgtgtctgaatagaatagaacgagcccacagcaaagcagtcacctgtgtctgc
ttcaacaaggacagcagtcaactattaagtggctcctttcaccagaccatcaggcttcat
ggtttgaagtcaggaaagatgctgaaggagtttagaggccatacggctcatataaatgac
atcatcttctcacacgagggccagcatgtcattagcgcgtcagcagatggcacagtaaag
gtctggagcatgaagacaatggattgcactcacacaataaaaacccctgacattcctgat
ggtacagacatcactgttaacaacgttgtgcttgtcccaaagactcctgagcactttgtg
gtgtgcaataggaccaacacggtggttgttacgaacattcatggccaggtgatgaggagt
ttctgttcaggcgtaagagagggggcagactttgtttgctgcacgttgtctccacgtgga
gagtggatttattgtgtgggagaagactatgtgctgtactgcttcagcaccatcactggc
aaactagagagaaccctcacggtacatgaaaaagacgtggttggcataactcaccacccc
catcagaatctcatcgccacatacagcgaggatggcctgctcaagctctggaagccttga

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