Sinocyclocheilus rhinocerous: 107746935
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Entry
107746935 CDS
T04916
Name
(RefSeq) dmX-like protein 2
KO
K24155
rabconnectin-3a
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
107746935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
srx04131
]
107746935
Membrane trafficking [BR:
srx04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
107746935
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
107746935
RAVE complex
107746935
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_IFT140_1st
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_EML
Beta-prop_HPS5
Beta-prop_DCAF12
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_LRRK2
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
VPS11_N
Beta-prop_RIG_1st
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
107746935
NCBI-ProteinID:
XP_016416774
LinkDB
All DBs
Position
Unknown
AA seq
2849 aa
AA seq
DB search
MPDVTDKKIPAINFSFVYLAHPRTVTGFSWRKTSKYMPKGSVCNVLLTSCTDGICRLWSE
TLLPEDSLLGGQISENSTSFSSSLPNIAQKDKIQHALESIHHLKHLRRGRRRSSALVAHT
ELLPSQLGSHETHRHISHHANALCHFHISASISPNTDIPAALAGSGLFSEDVSGGFVVHW
LNNKDLSFTTSMDLFMEQLRKLSEQHLEQATEDFEQEGAAKFDFDLDEMSDKGSSEHEEG
DQEGSTKASSPGSSSSAPLPSVLLDRKLETLILEWNKSPDMLFTIHPHDGSFLVWHIRYL
DEFIPGIFRQVQVSFSSRIPVAFPTGDANSLSKNIMMYACTFMDQDNCSALEDKRSERRV
PQSASASAGLSALGHSLAAVIGAAVMMVSKHVDGSLNQWAVTFAEKSAFSNVLTVSHKFR
YCGHRFHLNDLACHTVLPLLLTSSHHNALLTPPSGSGSVDGDQIGGVALQPTRPTRGIPR
KQLRNAATRTFHDPNAIYSELILWRVDHIGPLSCTGGVSELARINSLHTSAFSNVAWLPT
LIPSSVLGTYCNSASACFVASDGKNLHLYQAVVDARKLLDELSDPETSKLVGEVFNIVSQ
QSTARPGCIIELDVITKQCGSNTQLLHVFQEDFILGYKPHEDIPDFNINSVPSGEEYQPP
SFSEKFYLVVIEKDANRNSVLQMWHLHLRSVQACVEEPVNDHVFQNQLTVRLSQNYGDSS
PDTTPGHSPLPRSSSSANLQSASKLILSSKLVYSQRLELPPGVELIRATPSAGHLSSSSI
YPVCLAPYLIVTTCSDGRVRFWHCRVDMDLSAPHPEETRSYRWEHWRLLKEEEDNDSSVS
VAGRPVAVSCSYTGRLAVSFKQMSPENEGGMLQDFSMLVSIYECESTGGSEWVLEQTIHL
DDFSKPAKTLHPCVSVDSNLVVYSKSDLFVTKDSPNIKRFVHLDWLSKEDGSHILTVGVG
SNILMYGRISGVVTEQTGVKDGMAVTLPLGGSIKQGIRSRWVLLRSVNLVSSVDGTPSLP
VSLSWVRDGILVVGMDCEMHVYAQWRQDEKPGDSDDNSISSPEGVGGRTMSVSNEGRAGS
KSVFEGSAGIDDAFRPPAVIQDGGLFEAAHSLSPTLPQYHPTQLLELMDLGRVRRAKAIL
AHLVKCIAGEVAVVRDVEAGEGGARRHLSRTISVTGSTAKDIIVAGRDGGRDYTEINSIP
PLPLYALLSADQDTSYKTGEEVGKAGKGAERETQKQPEDQYTDLFQVQAVTTDDFVSFAA
EKPEKKSRVINLSQYGPTYFGPEHAQVLSSHLMHSSLPGLTRLEQMFLVALADTVATTSA
EVAGPTDKQYTGGEALDECGLRYLLAMRLHTCLLTSLPPLYRMQLLHQGVSTCHFAWVFH
SEAEEEMLNMIPAMQRGDPQWSELRAVGVGWWIRNINTLRRMVEKVAKAAFQRHNDPLDA
ALFYLAMKKKAVLWGLFRSQHDEKMTQFFSHNFSEDRWRKAALKNAFSLLGKQRFEQSAA
FFLLAGSLKDAIEVCLEKMEDIQLAMIVARLYEADYESSSTCQAILYEKVLGCNRDGSGF
SCTKLHPDPFLRSIAYWIMKDYTRALDTLLEQIYKEDDKNPDVLVKSCNPVVFSFYNYLR
AHPLIIRRHFAKPEASGVAVGLTSECNSADEINLIERKLFFTTANAHFKVGCPLLALEVL
SKIPKVTKKASSLSKGSSVANVSGAQPQENGGKASDLNWGALAVPSQAWGADSSTGLDWS
QPMVKMEDEGLQMDWGFDKEEDEDEEGGLTMKKPEVEDEEAKKPSKSAALQHEDSTCESE
VDVIAEQLKFRACLKILMTELRTLATGYEVDGGKLRFQLYNWLEKEIEAMHHICNYKFEG
KVAAGQLEKWGEDGSLDLEDSQIRGEAGAYERHQMERRRLQAKQLHAERRKAWLRENQAL
LRVFLSYCSLHGAKGGGVTSVRMELLFLLQESQQEMTVKQLQSPLPLPTTLPLLSASIAP
TKTVIANPVLHLRNHIHDILYTIVQMEAPPHPDILDDQVNALHTLAASLSACIYQSLCDS
HSYSSQSEANQFTGMVYQGLLLSDRRRLRTESIEEHATPTSAPAQWPGVSSLISLLACAQ
GDDHIRLNVMLCEAVVAVYLSLLIHGLGTHSGNELFRLAAHPLNNRMWAAVFGGGAKLIV
KPKRPPEITPANLESNMQTELQSENTPALPPPTPPAEDVDRQRRRFNMRMLVPGRPVKET
PATPPPIPVERPTYKEKFIPPELSMWDYFVAKPFLPLSDSGALYDSDESGGSDNEDDDDA
FLSDTQMTEHSEPNSYSWSLIRLVMVKLALHNVKTFLPLTGLDFTELPVTSPLANAVLKT
LENWEQIILEKMNKFDGPPPNYINTYPTDLSAGGGPAILRHKAMLEPDNTPFKSKHRFSF
PARRLWHFLVKQEMLQETLIRYIFTKKRKQSESLDDHVDHLIQNCVTGARKTNKVEADMG
YPGGKAKIIHKESDIIMAFAINKANTNEIVLASTHDVQEVDVSTLLAAQPYTWIGEDFDK
ESRSSDDVDYRSSHTNISQASAGPFAPQQMAASSSMPWLGSGQTSMGSSVIMKRNLNNVK
RMTSHPIYQYYMTGAQDGSVRMFEWNRPQQLICFRQAGNARVTRLYFNSQGNKCGVADGE
GFLSLWQVNQTSSNPKPYLSWQCHSKSCGDFAFITSSSLIATAGQSNDGRNVCLWDTLVS
PSNSMIHAFQCHENGATVLQYAPKQQLIITGGRKGFVCIFDIRQRQLLHTFQAHDSAIKA
LAMDSTEDFFVTGSAEGNMKVWKLAGHGLMHSFSTEHAKQSIFRNIGAGVMQIETCPGNR
IFTCGADGTLKMRVLPDRYNIPASIFQIL
NT seq
8550 nt
NT seq
+upstream
nt +downstream
nt
atgccggacgttactgataaaaagatcccagcgattaatttctcatttgtgtatctggcg
catccacgtacagtcacaggcttctcctggaggaaaaccagtaaatatatgcccaagggc
tctgtgtgtaacgtgttgctgacgtcctgcacggatggcatctgtcgtctgtggagtgag
accctcttgcctgaggacagtcttttgggggggcagatctcagagaacagcaccagcttc
agctcctctctgccaaacatcgctcagaaagacaagatacagcacgctctggagtctatc
caccacctcaagcacctgcgtaggggccgcagaagatcgtccgccctggtggcccacacc
gagctgctgcccagccagctggggtcccacgaaactcaccgccacatctcacaccacgcc
aacgccctctgccacttccacatctctgccagcatcagtcccaacacagatatccccgca
gcgctggctggatcaggcctgttctctgaggacgtcagcggaggatttgtggttcactgg
ctgaataataaagatctgagcttcaccacctccatggacctgttcatggagcagctgcgc
aaactttctgagcaacacctggagcaagccactgaagactttgagcaggagggggcagcc
aagtttgacttcgatctggatgagatgtctgataagggctcttcagagcatgaggaggga
gatcaggagggcagcaccaaggcctcttctcctggttcgagcagcagtgctcctctaccc
tctgttttgctggatcggaaactggagactcttatcctggagtggaacaaaagtccagac
atgctcttcactattcacccacacgatggatccttcctcgtctggcacatcagatacctg
gatgagtttatacctggcatctttagacaggttcaggtgtcattctcctctcgtatcccg
gtagcgttccccacaggcgatgctaactccctcagtaagaacatcatgatgtacgcttgt
acgtttatggaccaagacaactgcagcgctctggaggataagagaagcgagcggcgggtt
cctcaaagtgcatctgcgtccgctgggctcagtgctcttggacactctcttgctgctgtc
atcggcgctgccgtcatgatggtttccaaacacgtggatggctcactcaaccaatgggct
gtgacctttgctgagaagtctgccttttcgaacgtcctcacagtttcacacaagttccgt
tactgcggacaccgtttccatctcaatgatttggcttgtcacacggtccttcccttgctg
ctgacatcatctcatcacaatgcactgttgactcctccctctggatctggaagcgttgac
ggagatcagattgggggtgtggctctacaacccaccaggccaacgagaggcattccccgt
aaacaactgcgaaatgcagccacgcgtacgttccacgaccccaatgcgatctacagtgag
ctgatcctctggagagtcgatcacattggcccactctcctgcacagggggcgtgtcggag
ctagcacgaatcaactcgctgcacacatctgcattctccaacgtggcctggctgccaaca
ctcatccctagctcagtgcttggaacgtactgtaactccgcaagtgcgtgctttgtggca
tctgatggtaaaaacctgcatctgtatcaggctgtggtggatgcccgcaaactgctggat
gaactctctgacccagagacctctaaactggtgggtgaagtattcaacattgtgagtcag
cagtccactgcccgacccggctgcatcatagagctggatgtcattactaaacagtgtggc
tcaaacacacagctgcttcacgtattccaggaggattttattttaggttacaaaccacat
gaagacattccagatttcaacattaacagtgttccctctggggaagagtaccagccccct
tctttctcagaaaagttctacctggtggtgatcgagaaggatgcaaatcggaactcagtg
ttacagatgtggcatcttcatttgcgctcggtgcaggcgtgtgtggaagagccagtaaat
gaccacgtgttccagaaccagctgacggttcgtttgagtcagaactatggtgactcatct
cctgacaccactccaggtcatagtccgctgcctcgctcctcctcttccgccaacctgcag
tcagccagcaaactcatcctgagctctaaactggtctacagtcagcggttagaacttcca
ccaggggtggagctaatcagagccacaccctctgccggtcacttgagctcctcatctatc
taccctgtgtgtttggctccatacttgattgtgaccacctgttctgatggacgcgtcagg
ttctggcactgtagggtggacatggacttatcagcgccacaccctgaagagacacgttca
tatcggtgggagcactggagactcttgaaagaggaagaggacaacgacagctctgtgagt
gttgcgggtcgacccgttgcggtcagctgctcctacactggaagacttgctgtgtcgttc
aaacagatgtcgcctgagaacgaaggtggcatgcttcaggacttctccatgcttgtatcg
atctacgagtgtgagtcgacgggtggctcagagtgggtcctggaacagacgattcacctt
gacgattttagcaaacctgcgaagacgctacatccgtgtgttagtgttgatagcaatttg
gttgtctatagcaagtcagatttgtttgtaaccaaagacagccccaatatcaaacgcttt
gtgcacctagactggctgtctaaagaagatgggtcgcacatcctgacggtcggggttgga
tccaacatccttatgtatggacgcatctcaggggttgtcacagagcagacaggagtgaag
gatggcatggcagtcaccctgcctctagggggcagtataaagcagggaattcgctctcgt
tgggtgctgcttaggtccgtaaacctcgtctcttccgtggacggtaccccatccctgccg
gtgtccctatcctgggtgcgtgatggcatcctggtggtgggcatggattgtgagatgcat
gtttatgcgcagtggaggcaggatgaaaaaccgggtgactctgatgacaacagcatctca
tccccagaaggcgttggaggtcgcacaatgtccgtttcaaatgagggcagagcgggatct
aagagtgtctttgagggcagtgcgggaattgatgatgcgttccgccccccagcagtgatt
caagatggcggtttgtttgaggcggcccattcattgtcgcccactcttccgcagtaccat
ccaacacagcttctagagcttatggaccttggaagggtacgtcgtgccaaggccattttg
gcacacctggtcaagtgcattgctggagaagttgcagtggtgagggacgtagaagcaggt
gagggtggcgccaggaggcacctatcccgaaccatcagcgtgacgggtagcacggcaaaa
gacattatcgttgctggccgagatggtgggcgagattacaccgaaatcaattccatacct
ccacttccgctatacgccctgctgtctgcggaccaggacacctcttacaagacgggagag
gaagtgggaaaagctggaaaaggggcagaacgtgagacacagaaacaaccagaggatcag
tacactgatctgtttcaggtgcaggctgtcaccaccgacgattttgtgagctttgctgca
gagaaaccagagaagaagtctcgtgtgattaacctatcacagtacggccccacgtacttt
ggccctgaacacgcacaggtgctgtcttcacatcttatgcactccagcctgccaggtctc
acacgccttgagcagatgttccttgtggctcttgccgatactgtggcgaccactagtgca
gaagtagcaggacccacagataaacagtacactggtggagaggctctagatgagtgtggt
ctgcgttacctgctggccatgaggttgcatacctgtctgctgacatccctgcccccactc
tacaggatgcagctacttcatcagggtgtgtccacatgtcactttgcatgggtgttccat
tcagaagctgaggaggagatgctgaacatgattcctgccatgcagagaggagatccgcag
tggtctgaactcagggcggtgggtgtcggctggtggatcagaaacattaacacactgagg
cggatggtggagaaggtagccaaagcagcatttcagaggcataatgatccgctggatgcg
gctctcttctatctggccatgaagaagaaggctgttctctggggtctctttaggtctcaa
catgatgagaagatgacccagtttttcagccataacttcagtgaggaccgctggaggaag
gcggctttaaagaacgccttctctctcctgggcaaacagcgctttgagcagtcggctgca
tttttcctgctcgctggctccctgaaagatgccattgaggtttgtctggagaaaatggag
gacatccagcttgcgatgattgtcgctcgtctttacgaggctgattacgagagttcctcc
acctgccaggctatcctgtacgagaaggttctcggctgcaacagagatggaagcgggttc
tcctgtaccaaactgcaccctgacccgtttctgaggagcattgcgtactggatcatgaag
gactacaccagagccctggacacactgctggagcagatttacaaagaggatgataagaac
cctgatgttctggtgaaatcgtgtaatcctgtcgtctttagtttctataactacttgcga
gcacaccctctgattattcgacggcattttgccaagcccgaagcatctggggttgcagtt
ggtctaacatcagaatgcaacagcgcagacgaaataaaccttatagagcggaaactcttc
ttcaccaccgctaacgctcactttaaggtgggctgcccactcctggcccttgaggtgtta
tccaaaatccctaaagtcactaagaaagcgtcttctctgagtaagggctcttctgtggcc
aatgtcagtggtgcccagccacaggagaacggaggaaaggcttcagatctcaactgggga
gctcttgccgtccccagtcaggcctggggagcagactcctctactggactggactggagt
caaccgatggttaaaatggaagatgaaggtctacagatggactggggttttgataaggaa
gaagatgaggatgaagagggtgggctgaccatgaagaagccggaggtggaggatgaggag
gctaaaaagccatccaaatcggcagccctgcagcatgaagactcaacgtgtgagtctgag
gtggatgtgatcgccgaacagctgaagttccgagcctgtttgaagatcctcatgacggag
ctgcggacactggcaacaggatatgaggtggatggtggcaaactgcgatttcagctctac
aactggctggagaaagaaatcgaggccatgcaccacatctgcaactataagtttgaagga
aaagtggctgcaggtcagctggagaagtggggtgaagatggatctctggacctggaagac
tcacaaatccggggtgaagcaggtgcgtacgaacgtcatcagatggagcgacggcgtctg
caggccaagcagctgcatgcagagaggagaaaagcctggctgagagagaatcaggctctg
ctcagagtcttcctcagttactgcagtctacacggagccaagggtggaggagtgacgtct
gtcaggatggagctactcttcctgctgcaggaatcgcagcaagaaatgacagtgaagcag
cttcagtcaccactccccctccccaccactctgcccctgctgtcagccagcatcgccccc
accaagactgtcatcgccaaccctgtcctgcatctcagaaaccacatacatgatatcctc
tacaccattgtccagatggaggctcctccacacccagacatactggacgaccaggtgaat
gctttacacacactcgctgcttctctatcggcctgtatctaccagtcgctgtgtgacagc
cacagctacagcagtcaatcggaggccaatcagttcacagggatggtgtatcaggggctg
ttactgagcgacaggcgtagacttcgcactgagagcatcgaggaacatgcaacacccacc
tctgcccctgcacagtggccaggtgtgtcgtctctgatcagtctgctggcgtgtgctcag
ggtgatgatcacattcgtctgaatgtcatgttgtgtgaggcagtggtggctgtttatctc
agtctgctgattcacggtcttggcacacactctggaaacgagctcttccggctagccgct
catcccctcaacaaccgcatgtgggccgctgtgtttgggggaggagccaaacttattgtc
aaacccaagcggccacctgaaatcactccagccaatttggagtcaaacatgcagacagag
ctccagtctgagaatacaccagcattacctcccccaacccctcctgctgaggatgtggac
cgacagcgacgcaggtttaacatgcgcatgcttgttcctggacgtcccgttaaagagact
cctgccacacctccgcccatccctgtagaacggcccacctataaggagaaattcattcca
cctgagctcagcatgtgggattactttgtggccaaacctttccttcctctctctgacagt
ggggcactgtatgattcagatgagagcggtggtagtgacaatgaggatgatgatgatgcc
ttcctctcagacacacagatgaccgaacactccgaaccaaactcctacagttggtctctg
atccgcctagtgatggtcaaacttgccctgcacaatgtcaagacattcctgcctctgaca
ggactggacttcacagagttgccagtgacgtctcccctggccaatgctgtgctgaagaca
ctggaaaactgggaacagattatcttggaaaaaatgaacaaatttgatggccctccacca
aactacatcaacacctaccccacggacctgagtgcagggggaggaccagctatactccga
cacaaagccatgctagagccagataacacaccgttcaagtcgaagcaccgcttctccttc
cctgctcgccgtctgtggcattttttggtcaaacaggagatgctccaggagactttgatt
cgatacatcttcacaaagaaaaggaagcagagtgagtctttagatgatcatgtggaccac
ctcatacaaaactgcgttactggagctcgaaaaaccaacaaggtggaggctgatatgggt
tacccaggaggcaaagcgaaaatcatccataaagaatccgacatcatcatggcgtttgcc
attaacaaggctaacactaatgaaatagtgctggcgtccactcatgatgtccaggaagtg
gacgtgtccacgttgctcgcagctcagccttacacctggatcggagaggactttgacaag
gagtctcgcagttctgatgatgtggattaccgctcgtctcacaccaacatctcccaggcc
agtgctggtccctttgccccccaacaaatggcagcatcgtcctccatgccatggctgggc
agcggacagaccagcatgggttccagtgtgatcatgaagaggaacctgaataacgtgaag
agaatgacgtctcatcccatctatcagtactacatgacgggtgctcaggacggcagtgtg
aggatgtttgagtggaaccgtccacagcagctcatctgtttcagacaggcaggaaacgct
cgagtcacacgcctttatttcaactcacagggcaacaagtgtggtgttgcagatggcgag
ggctttttgagcctctggcaagtcaatcagacctcctcgaaccccaaaccgtatttgagc
tggcagtgtcacagtaaaagctgcggtgatttcgccttcattacatcctccagtctgatc
gccacagcaggacagtccaatgatggcaggaatgtttgtttatgggacactctggtctct
ccaagtaactcaatgatacacgcgttccaatgccatgagaatggtgcaacggttcttcaa
tatgctcctaaacagcagctaatcatcacgggcggccggaagggcttcgtctgtattttt
gacatccgtcagagacagctgctccacacattccaggcacatgattcggccatcaaagcg
ctggccatggattccactgaagacttctttgtcaccggctcagccgaagggaacatgaag
gtctggaagttggcgggtcacggtctcatgcactccttcagcaccgagcacgctaaacaa
tccatattccgaaacatcggcgccggcgtgatgcaaatcgaaacctgcccaggcaaccgg
atcttcacctgcggagccgacgggaccctgaaaatgagggtccttccagaccgctacaac
attccggccagtatattccagatcctctaa
DBGET
integrated database retrieval system
