Sinocyclocheilus rhinocerous: 107747026
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Entry
107747026 CDS
T04916
Name
(RefSeq) thrombospondin-4-like
KO
K04659
thrombospondin 2/3/4/5
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04145
Phagosome
srx04510
Focal adhesion
srx04512
ECM-receptor interaction
srx04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107747026
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
107747026
09144 Cellular community - eukaryotes
04510 Focal adhesion
107747026
09142 Cell motility
04820 Cytoskeleton in muscle cells
107747026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
srx04131
]
107747026
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
srx04147
]
107747026
00536 Glycosaminoglycan binding proteins [BR:
srx00536
]
107747026
Membrane trafficking [BR:
srx04131
]
Endocytosis
Phagocytosis
Opsonins
107747026
Exosome [BR:
srx04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107747026
Exosomal proteins of colorectal cancer cells
107747026
Exosomal proteins of bladder cancer cells
107747026
Glycosaminoglycan binding proteins [BR:
srx00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107747026
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_CA
EGF_3
COMP
cEGF
EGF
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
107747026
NCBI-ProteinID:
XP_016416928
LinkDB
All DBs
Position
Unknown
AA seq
750 aa
AA seq
DB search
MLWTLLFSCSLYLHGALVSAQGVSRDGEIIKQIKGTNQELAEIKELLKQQIQEVVFLKNT
VMECEACGMRPVDPIEPSCVPDPCHVGVECIMTPSGVKCGPCPEGMTGNGTHCTDVDECA
VMPCHMGVRCINTSPGFRCGPCPAGYMGPQVQGVGLAYASANKQVCKDINECENSNGGCV
ENSNCINTPGSFRCGHCKTGFVGDQVKDCKPERACGNGQPNPCHASAECIVHRDGQIECA
CGVGWAGNGYLCGTDTDIDGFPDEKLKCLERNCAKDNCLTVPNSGQEDADKDRIGDACDD
DADGDGILNTEDNCVLVPNVNQKNIDQDDYGDACDNCRQVKNNDQKDTDSDGQGDECDDD
IDGDGIKNDKDNCKKVPNRDQKDRDGDNVGDACDSCPYVRNPDQMDVDNDLIGDPCDTNK
DSDGDGHQDSRDNCPAVINSSQLDTDKDGIGDECDDDDDNDGIPDLLPPGPDNCRLVPNP
LQEDLDGDGIGNVCENDFDNDTFSDIIDVCPENTEVTLTDFRTYQTVVLDPEGDAQIDPN
WVVLNQGREIVQTMNSDPGLAVGYTAFNGVDFEGTFHVNTETDDDYAGFIFGYQDSSSFY
VVMWKQVEQIYWQANPFRAVAEPGIQLKAVKSDTGPGENLRNSLWHTGDSTNQVKLLWKD
SRNVGWKDKTSYRWFLQHRPQEGYIRVRFYEGQQMVADTGIIIDTTMRGGRLGVFCFSQE
NIIWANLRYRCNDTIPEDFETFRSQQIQLF
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgctgtggactctcctgttcagctgcagcttgtatctgcacggtgctctggtttctgct
caaggagtatccagagatggagagattatcaaacagattaaaggcacaaaccaggagctt
gctgaaatcaaagaactgctgaaacaacagatacaggaagttgttttcctgaagaacaca
gttatggagtgtgaagcctgtggcatgagaccagtagatcctatagagccgtcatgtgtt
cccgacccctgccatgttggtgtggaatgcataatgactcccagcggtgtgaagtgtggt
ccgtgtccagagggcatgacaggaaatggaactcactgtacagatgttgatgagtgtgct
gtaatgccatgtcacatgggggtgagatgcattaacacgtcacctggttttcgctgtggc
ccctgtcctgctgggtacatgggcccccaggtgcagggggtgggacttgcctatgcatct
gccaataaacaggtgtgcaaagacattaatgagtgtgagaactcaaatggaggctgcgtg
gagaactccaactgtatcaacacaccaggctcttttcgctgtggccactgcaagactggt
tttgttggggatcaggtgaaagactgcaaacctgagcgggcctgtggtaatggtcagccc
aatccttgccatgccagtgcagaatgcattgttcaccgtgatggacagattgaatgcgca
tgtggagttggatgggctgggaatggatacttatgtggaacggacactgatattgatggc
ttccctgatgaaaaactgaaatgtttggaaagaaactgtgcaaaggacaactgcctcacc
gttccaaactctggccaagaggacgcagacaaggatagaatcggtgatgcatgtgatgat
gatgcagatggagatgggatactaaacacagaggacaactgtgtgctagtccccaacgtc
aatcagaagaacattgatcaggatgattatggagatgcttgtgataattgccgtcaggta
aaaaacaacgaccagaaggacaccgatagcgatggtcagggtgatgaatgtgatgatgac
attgatggggatggaatcaaaaacgataaagataattgcaaaaaggtgccaaaccgtgac
cagaaagatagagacggtgataatgttggtgatgcttgcgacagctgtccctacgtccgc
aaccctgatcagatggatgtggataatgacttgattggcgatccttgtgacaccaacaaa
gatagtgatggagatgggcatcaggactctcgagacaactgtcctgcagttatcaacagc
tcccagctggacacggacaaggatggcattggagatgaatgtgatgatgatgatgacaac
gatggcattcccgatctccttccacccggtccggacaactgccgtctggttccaaaccca
ctgcaggaggacttagatggtgatgggattggcaacgtttgtgagaatgactttgacaat
gacacatttagtgacatcattgatgtttgtcctgagaacactgaggtgactctcactgac
ttcagaacctatcagactgtggttctggatccagaaggagatgcgcagatcgatccaaac
tgggtggtgctcaatcagggaagagagattgttcagaccatgaacagtgatcctggactg
gctgtaggctacacggcattcaatggtgtggactttgaagggacgtttcatgtgaatact
gagacggatgatgactatgcaggctttatctttggctatcaggacagctccagcttctat
gtggtgatgtggaagcaagtggagcagatatattggcaagccaatcctttccgagctgta
gctgagcctggcatccagctgaaggcagtgaaatccgacacgggacccggagaaaacctg
cggaattcactctggcacacaggtgactcgacaaaccaggtgaaactcttgtggaaagat
tccagaaatgttggctggaaagacaagacctcctaccgctggttcctgcagcacagaccc
caagaaggctacatcagggttcggttctatgaaggtcagcagatggtagcagatacagga
attatcatcgacacaaccatgagaggaggcagactgggagtattttgcttctcccaggag
aacatcatctgggccaacctgcgctacagatgcaacgatacaatccctgaggactttgag
acattcagaagccagcaaatccagcttttttga
DBGET
integrated database retrieval system
