Sinocyclocheilus rhinocerous: 107747276
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Entry
107747276 CDS
T04916
Name
(RefSeq) TATA-binding protein-associated factor 172-like
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srx03021
]
107747276
Transcription machinery [BR:
srx03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
107747276
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
HEAT_EF3_N
Vac14_Fab1_bd
HEAT_2
TPR_Trm732_C
HEAT_EZ
ARM_ECM29
Arm
Motif
Other DBs
NCBI-GeneID:
107747276
NCBI-ProteinID:
XP_016417230
LinkDB
All DBs
Position
Unknown
AA seq
1868 aa
AA seq
DB search
MAVSRLERLFILLDTGSTPVTRKAAAQQLGDVVKLHPHELNNLLSKVLTYLRSPNWDTRI
AAGQAVEAIVRNIPEWNPAPKPKDEVCAEDMSPEDISSDRLSFYRFDISHLLKHGASLLS
SAGAEFELQEDKTGEIDPKERLARQRKQLQKKLGLDMGAAIGMDTEELFNDEDLEDACAS
STNRSQPGKSLGCHFSRNHLPAAELIDSEFRPGMSNRQKNKAKRMAKLVAKQRSRDVDPN
EKSNDSFEGEPEEKRRKTTNVVIEQPATDSKVLIDNVPDNSSLFEETQEWPLESFCDELC
NDLFNPSWEIRHGAGTGLREVLKCHGTGGGKTVGSTAEQMERQHQEWLEDLVIRLLCIFA
LDRFGDFVSDEVVAPVRETCAQTLGVALRHMANSGFAMTVDILLKLLTEDQWEVRHGGLL
GIKYALAIRQDLITELLPRVLPAITEGLRDLDDDVRAVAAAALIPVVDGLVQLQPAKVPF
IVDTLWNALLELDDLTASTNSIMTLLSSLLTYPQVRQCSTHQSLTVLVPRVWPFLRHTIA
SVRRAALETLFTLLSKADQSCALWLNPIMQDMLRHIFQSCILESNQEILELIQKVWGELL
RQAPQQYVVATSCPWMGAWLCLMMQASHIPIDPNMLLDVKARLKEKATGKTRQGSVPVKE
MVQEYIGGAETITEDPATRDYVVTRARLMAAKLLGALCSCICDPRLNSSSQELRPAESLA
QLLLFHLNSKSALQRIAVSMVICEWAGLQKECELLSSVVQPRLLVILSEQLYYDEIAIPF
TRMQNECKQLIALLADAHIDVRERINSTVFTVDQANELVTTIFSECTSSLNLKSRQFQLL
DSKRLQARSTVCETSAEWQQLQLRVHTFTACAVVGLAMLPDKLNPVVRPLMVAARREENT
LVQGYAASNIARLLQLCAARSPCPNAKIVKNLCSSVCVDPMLTPSAACPVPPASTPAIQE
SSKASVAEKDAMHHMVNKSKGIITLYRHQKAAFAITSKRGPTPKAPKTTNNDLPLGGSIT
TETDESKKPCLIQRRGAEFCLMTVARHFGKELTKALPYLWESMTGLLRNALDAQGFASSQ
LLKQGDSVAQELVNSLQVLEVTAGAMSQELNPLLMEQLPLLCTCLQHPYTAVRHMAARCV
GVLSKIATMETMNVFLEHVLPWLGAIDDSTKQEGAIEALACVMEQLDVDIVPYIVLLVVP
VLGRMSDPCDSVRFMATQCFATLIRLLPLEAGIPDPPSMSEDLIRQKARERHFLEQLLDG
RKLENYKIPVPIKAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHF
LRAQEYARSKAPDCCPLPSIVVCPPTLTGHWVDEVGKFCSKEYLNPLHYTGPPTERAWLQ
HQVKKHNLVVASYDVVRNDIDFFRDIKFNYCILDEGHVIKNGKTKLSKAIKQLTANYRII
LSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDAKSSSREQEAGVLAME
ALHRQVLPFLLRRMKDDVLQDLPPKIIQDYYCNLSPLQVQLYEDFAKSRAKVNVDDVIST
ASMQEEEEKPKLKATGHVFQALQYLRKLCNHPALVLTPQHPEYKHITEQLSSQHSNLRDI
LHAPKLSALKQLLLDCGLGSAGAADGGTEAVVAQHRILIFCQLKSMLDIVEQDLLKAQLP
TVTYLRLDGSVQAGLRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNP
MRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMTIANTVISQENASLQTST
PTSETFCTPQNSQPSNRCDNKAEKSEAAASSSSGQASMKSVLDGLGDLWDQQQYEKEYDL
DSFMHSLK
NT seq
5607 nt
NT seq
+upstream
nt +downstream
nt
atggctgtttcaaggttggagcggctgtttatcttactggatacaggttcgactcctgtt
acccgtaaagcagctgctcagcagttgggagatgttgttaagcttcacccacatgagctt
aataacttgctatcaaaggttttaacatacttgaggagtccaaattgggatacacgaatc
gcagcgggacaagctgttgaagccatagtgaggaatattccagaatggaacccagctcca
aagccaaaagacgaggtgtgtgcagaagatatgtcaccagaggacatctcctcagacagg
ctgagtttctacaggtttgatatctcccatctgctcaagcacggagcatcgctgctcagc
tctgcaggtgctgaatttgagctgcaagaagacaagacaggtgagatagatcccaaagag
cgtttggctcggcagaggaaacagttacagaagaagttgggattggatatgggtgcagcg
atcggcatggacacagaggagctttttaatgatgaggacctggaggatgcctgcgcttcc
agtaccaacagatcacagcctggtaaaagcctgggctgtcacttctcacgcaaccatttg
ccggctgcagagctcatagattcagagtttcgtccaggcatgagcaatcgacagaagaac
aaagccaagaggatggcaaaacttgtggcaaagcagagatccagagacgtggatcctaac
gagaagagcaatgacagttttgagggagagccagaggagaagcgccggaaaaccacaaat
gtagtcattgagcagccagcaaccgacagcaaagtcttaattgataatgttcctgataac
tccagtttatttgaggagactcaggaatggcccctggaaagcttctgtgatgaactgtgc
aatgacctcttcaacccctcgtgggagattcgtcacggtgccggcacgggactgagggaa
gtgctgaagtgtcacggtactggtggaggaaagactgttggcagtacagcagaacagatg
gagcgacagcaccaggagtggctggaggatttggtcatccggcttttgtgcatctttgct
ctagacagattcggagactttgtgtcagatgaggtggttgcacctgtcagagagacgtgt
gcccagactctgggtgtggccttgaggcacatggcgaacagtggctttgccatgactgtg
gacattctgctcaagctgctaactgaagaccagtgggaggttcgacacggaggcctactg
ggcatcaaatatgctcttgctatcagacaggatttgatcactgagctgctgccccgggtt
cttcctgccattacagaaggcctgcgggatctggatgatgatgttcgtgcagtggcagca
gcagctttgatcccagtggtggatggattggttcaattgcagcctgctaaggttcctttc
attgtggacacactgtggaatgccctgctggagctggatgatctcacagcttcgactaac
agcatcatgaccctcctgtcctccctgctcacttacccacaggtccgccagtgcagcacg
caccagtctctcacagtgttggttcctcgagtatggccattcctgagacacacaatcgct
tctgttcgtcgggctgccctagagaccctctttacattgctttccaaagctgaccagagt
tgtgcattgtggctgaatcccatcatgcaggacatgttaagacacatctttcagtcctgc
atcctggagagcaaccaggagatccttgagttgatacagaaggtgtggggggagttgttg
cgacaggccccgcagcagtatgtggtggcgaccagctgtccttggatgggtgcctggctc
tgtttgatgatgcaagcgtcacacatcccaatcgaccccaacatgctgctggacgttaaa
gcacgcttaaaggagaaggctactggaaagaccagacagggatctgttccagtcaaggaa
atggtccaggagtacatcggtggagcggagacgattaccgaagaccctgccacgcgagac
tatgtggtgacacgtgcacgtctaatggctgcaaagctgttgggggcgctgtgcagttgt
atttgtgacccacggttgaatagctcttctcaggaactccggcctgccgagtctctagca
caacttttactgttccatctcaattccaaatcggccctgcagcggattgcggtttccatg
gtgatctgtgagtgggcaggccttcagaaggagtgtgagctgctgtccagcgtggttcag
ccccgattgctggtcattctctcagagcaactctactacgacgagatcgcaattcctttt
actcgcatgcagaacgaatgtaaacagctcatagcgctgctggctgacgcccacattgac
gtgagagaacgaatcaactccactgtattcaccgttgatcaggctaatgagctggtgaca
accatcttctcagaatgcacctcctctctgaacctcaaatcacgtcagttccagctgctg
gacagcaaaaggttgcaggctcgttccactgtgtgcgagaccagtgcagagtggcagcag
ctgcagctgagagttcataccttcactgcctgcgctgtggttggacttgccatgttgccg
gataaactcaatcctgttgtcaggcccctgatggtggcggcccgccgcgaagagaacacg
ctcgtccagggttatgcagcctccaacattgcccgcctgctgcagctgtgcgctgccaga
tctccctgcccgaatgccaagatcgtgaagaatctctgcagctcggtgtgtgtagatcca
atgctcacccctagtgctgcatgtcctgtcccgccagctagcactccagcaatacaagag
agcagtaaagcatctgtggcagagaaggatgcgatgcatcacatggtgaacaagtcaaag
ggcatcatcaccctttaccggcatcagaaagcagcttttgccatcaccagtaagagagga
cccacaccaaaagcccccaaaactaccaacaatgacctgcccctcggaggcagcattacc
acagaaacagatgagagcaagaagccatgtcttatccagaggagaggggcagagttctgc
ttgatgacagttgccaggcattttggtaaagagttgaccaaagcgttgccatatctgtgg
gagtccatgaccggtctgctgaggaatgcgctggatgctcagggatttgcttccagccag
ttgttgaagcagggagactcggttgctcaggagcttgtgaactctctgcaggtgctggag
gtcacagcaggagccatgtcccaagaactcaaccctttattgatggagcagttgcctctc
ctgtgcacctgtctgcaacatccatacacagccgtacgtcacatggctgcgcgctgtgtg
ggcgtgctcagcaagatcgctactatggagaccatgaatgtgttcctggaacatgtgctt
ccctggttgggtgctattgatgacagcaccaagcaggagggagccatcgaagccctggcc
tgtgtgatggagcagttggatgtggatattgtgccctacatcgtgctgttggtggtcccc
gtgttgggccgtatgagtgacccctgtgacagcgtgcgattcatggccacgcagtgcttt
gcaaccctgatccgactgcttcctcttgaggctggaatcccagacccgccgtctatgtct
gaagatctaattcgacagaaggccagagaacgacacttcctcgagcagctgcttgatgga
aggaaactggaaaattataagattcctgtgcccatcaaagcagagctcaggaaataccaa
caggatggagtgaactggctggcatttttgaacaagtacaagcttcatgggatcttgtgt
gatgatatgggtctgggtaagaccctacagtctatctgtattctggcaggcgatcatttc
ctcagggctcaggagtacgccaggtcaaaggctcccgactgttgccctttgccctccata
gttgtgtgtccacccaccctgacaggacactgggtggatgaggtcgggaagttctgctct
aaagagtatctcaatcctttgcactatactggcccccctacggaaagagcatggttgcag
caccaggtgaagaaacacaatcttgttgttgcctcgtatgatgtcgttagaaatgacatt
gactttttcagggatattaaatttaattactgtatccttgacgagggtcacgtcataaag
aatggaaagaccaaactttctaaagcgatcaagcagttaactgccaactacagaataatc
ctctcaggaacgcccattcagaacaatgttctggagttgtggtctctctttgacttcctg
atgccaggctttcttggcactgagcgtcagtttgctgcccgctacgggaagcccatcctc
gccagtcgagatgctaaaagttcctcacgtgaacaggaagcaggtgtgctggcaatggaa
gcgctgcatagacaggttctgcccttcttactgaggagaatgaaggatgatgtgcttcaa
gatctgccacccaagatcatacaagattactactgtaacctcagtcctctacaggttcaa
ctgtatgaggactttgcaaagtctcgtgcaaaggtgaacgtggatgacgttatttccact
gcgtctatgcaagaggaggaagagaaacccaaattaaaggccaccggacacgtcttccag
gctctgcagtatctgaggaagctgtgtaatcacccagcactggtgctgacccctcaacac
ccagagtacaaacacatcacagaacagctgagcagccagcactccaacctcagagacatt
ctgcacgccccaaaactctcagccctcaaacagctgctgttggactgtggactgggttct
gctggagcagctgatggcggcacagaggctgtggtggcccagcaccgcattctgatcttc
tgccagctgaagagcatgctggacatcgtggagcaggatctgctcaaagcacagctaccc
acagtcacctacctcaggctggatggaagcgttcaggccggcctcagacactccatagtc
tctaggttcaataatgacccatccatagatgttctgctgctcactacccatgtgggtggg
ctaggtttgaatctgactggagcagataccgttgtgtttgtggagcatgactggaacccc
atgagagacttgcaggccatggatcgagcacaccgaataggacagaaacgtgtggtgaat
gtgtatcgtctcatcacacggggcacgctggaggagaagattatgggtctgcagaaattt
aagatgaccattgcaaatacagtcatcagccaagagaacgccagcctgcagaccagcact
ccaacctcagagacattctgcacgccccaaaactctcagccctcaaacaggtgcgataat
aaagcagagaagagcgaggcggcagcgtcgtcatcctctggtcaagccagtatgaagtct
gttctggatgggctgggcgacctgtgggaccagcagcagtacgagaaagaatacgacctg
gacagcttcatgcactcacttaaatga
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