Sinocyclocheilus rhinocerous: 107747280
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Entry
107747280 CDS
T04916
Symbol
polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
107747280 (polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srx03021
]
107747280 (polr1b)
Enzymes [BR:
srx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
107747280 (polr1b)
Transcription machinery [BR:
srx03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
107747280 (polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
Motif
Other DBs
NCBI-GeneID:
107747280
NCBI-ProteinID:
XP_016417235
LinkDB
All DBs
Position
Unknown
AA seq
1000 aa
AA seq
DB search
MDLNKWCNLKSEPSLKHLTEAEFGVPKEKQRVSVQELVKAHIESFDQAVTDGLCRVVEAI
PPMEFMYKGDRISLSFVEAIIHTPAVSKGGISSDLRVFPAECRGRRCTYRGKLVADVSWS
MNGVPKGIIKQSLGNVPIMVKSKLCNLHGLSPKELIEHHEEAEEMGGYFIVNGIEKVIRL
LIMPRRNYPITVSRPKFKSRGQGYTQYAISMRCVRGEHTAINMNLHYLDNGTVMVNFIYR
KELFFLPLGFALKEKMAGWFVSVKLSLDKRSQRVGGLTSDSMTRLFNTGTDLTRAFEYLL
ATGNLQSKTGLGMLQDTGLCVVADKLNFIRYLSHFRCVHRGAAFAKMRTTSVRKLLPESW
GFLCPVHTPDGEPCGLMNHLTAHCEIVAPMHPTTTLPALLCSLGVTAADGSPGQPYSDCY
PVILDGAMIGWVEKEVAPSVIESLRRFKVLGERRIPPWTEIVLVPQTGKASLYPGLYLST
TPCRMVRPVRNLSLGKQELIGTFEQVYLNVGIFEEELEQGVTTHQELFPHSMLSVVAEFI
PFSDHNQSPRNMYQCQMSKQTMGFPLHSYQERSDNKLYRLQTPQSPLVRPAMYDHYDIDN
YPIGTNAIVAVISYTGYDMEDAMIVNKSSWERGFAHGSVYKTELIDLSDKVKGDDSIVFG
VKPDDPKVMDRLDADGLPFIGSTLNYGDPYYSYINLNTGQSYVNFYKYQESCVVDNIKVC
SNDTGTGRFKRICITTRIPRNPTIGDKFASRHGQKGILSRLWPAEDMPFTESGMCPDILF
NPHGFPSRMTIGMLIESMAGKSAALHGLCHDATPFKFSEESSALKHFGEMLKAAGYNYYG
TERLYSGISGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKVTNQPLGGRNVQGGI
RFGEMERDALLAHGTSFLLHDRLFNCSDRSVAQVCMDCGSLLSPLLEKPPPYWSNTRHRK
TICLLCNKSDSIETVSVPYVFRYFVAELAAMNIKIKLDVK
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atggatcttaacaagtggtgcaatttaaagtccgaaccgagtttaaaacatttgacagag
gcagagttcggtgtcccgaaagaaaagcaacgcgtgtccgtgcaggagctggtgaaggcg
cacattgagtcatttgatcaggcagttactgatggattatgtcgggttgtggaggccatt
cctcctatggagttcatgtacaagggagacaggatcagtctgtcgtttgtggaggccatc
attcacaccccagcagtttctaaaggaggaatcagcagtgacctgcgggtcttccctgct
gaatgcagaggcaggcgctgtacttacagaggaaagctagtggcagacgtgagttggtct
atgaatggcgttcccaaaggaatcatcaaacagtctctgggtaatgtgccgatcatggtc
aaatcaaaactctgcaaccttcatggtctctcacccaaagaactcatcgagcatcacgaa
gaagctgaggaaatgggcggctatttcatcgttaacggcatagagaaggtgattcgtctt
ctgatcatgccaaggaggaactatcccatcacagtgtcaagaccaaagtttaagagcaga
ggacagggctacactcagtacgctatttcgatgcgctgtgtaagaggcgaacacacagcc
attaatatgaatcttcactacctggacaatggaacggtgatggtgaatttcatttaccga
aaggagctgttctttcttcccttgggctttgcactgaaggagaaaatggcaggctggttt
gtatcggtaaagctgtccttggacaagagaagtcagagagtgggtggactgacttcagat
agtatgaccagactcttcaacacgggtacagatctcaccagagcctttgagtatctgtta
gccacaggaaacctccagtccaagacgggtctgggcatgctgcaggacaccggactgtgt
gtcgtggcagataagctgaacttcatccgttacctgtctcatttccgctgcgtgcacaga
ggagccgccttcgctaagatgaggaccacatctgtgaggaagctgctgccggagtcctgg
ggtttcctgtgcccggttcacactcctgacggagaaccgtgcggccttatgaaccacctg
acagcccactgcgagattgtggccccaatgcatcccacaacaaccctgcctgccctgctc
tgctctctgggtgtaactgcggcagacgggagccccggtcagccgtattcggactgttat
cctgtcatactggacggggccatgattggctgggtggaaaaagaagtggccccatcagtc
atcgaatctcttcgcagatttaaggtgctgggagagagaagaattccgccctggactgag
atcgttctggttcctcagacgggtaaagccagcttgtacccaggcctctatctgtccacg
actccctgtcgcatggtgcggcccgtccggaacctcagcctgggcaaacaggagcttatt
ggcaccttcgaacaggtgtatctgaacgtgggcatcttcgaggaggagctggagcaagga
gtgaccacgcatcaagagctgtttcctcacagcatgttgagtgtggtggcagaattcatc
ccattctctgatcacaatcagagccccagaaacatgtaccagtgccagatgagtaaacag
acaatgggcttcccgctgcattcataccaggaacgatcagacaataaactgtaccgtctg
cagacccctcagagtcctctggtcagacctgcgatgtacgatcactacgacattgataat
taccctattggcaccaacgcgatagtggctgtcatttcttacactggctacgatatggaa
gacgctatgatcgtcaataagtcttcatgggagcgtggctttgctcatggttctgtttat
aagactgagctcatagacctgtccgataaggtcaaaggtgatgacagcattgtgtttggg
gtgaagccagatgaccccaaagtaatggacagactggatgcagacggattgccgtttatc
ggctccacgctgaattatggagacccttactacagctacatcaatcttaataccggccag
agttatgtgaacttctacaagtaccaggagagctgtgtggtggacaacatcaaggtgtgc
agcaatgacaccggcactggccgcttcaagcgcatttgcatcacaacccgcattcccaga
aaccccaccatcggagacaagttcgccagcagacacggtcagaagggaatcctgagccgc
ctgtggcctgcggaggacatgcccttcaccgagagtggcatgtgcccagacatcctgttc
aacccgcacggcttcccctccagaatgaccatcgggatgctcatcgagagcatggctgga
aaatccgcggccctccacggcctgtgtcacgacgccacgccgttcaagttctccgaggag
agctctgcgctcaaacacttcggcgaaatgctgaaagccgcgggatacaactactatggc
acggagcgcctctactccggcataagcggcttggagctcgaggcggacatcttcatcggg
gtggtttactaccagcgcttgcgtcacatggtctccgacaagttccaggttagaactacg
ggagcgagagataaagtgaccaatcagccgctgggagggaggaacgttcagggaggaatc
cgcttcggagagatggaacgggatgctctgctggctcacgggacatcgttcctgctccac
gaccggctgtttaattgctcagaccgttctgtggcacaggtttgcatggactgcggtagc
ctgctgtcgccgcttctggagaagccgcctccttattggtcaaatacacgccatcggaaa
accatctgcttgctgtgcaacaagagcgactctattgagactgtgtctgttccttatgtg
tttagatactttgtagcagagcttgcggcaatgaacatcaaaatcaaattagatgtcaag
taa
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