Sinocyclocheilus rhinocerous: 107747419
Help
Entry
107747419 CDS
T04916
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04120
Ubiquitin mediated proteolysis
srx04137
Mitophagy - animal
srx04144
Endocytosis
srx04340
Hedgehog signaling pathway
srx04350
TGF-beta signaling pathway
srx04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107747419
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
107747419
04350 TGF-beta signaling pathway
107747419
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107747419
04137 Mitophagy - animal
107747419
09144 Cellular community - eukaryotes
04520 Adherens junction
107747419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
srx04131
]
107747419
04121 Ubiquitin system [BR:
srx04121
]
107747419
03029 Mitochondrial biogenesis [BR:
srx03029
]
107747419
Enzymes [BR:
srx01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
107747419
Membrane trafficking [BR:
srx04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
107747419
Autophagy
Mitophagy
Other mitophagy associated proteins
107747419
Ubiquitin system [BR:
srx04121
]
Ubiquitin ligases (E3)
HECT type E3
107747419
Mitochondrial biogenesis [BR:
srx03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
107747419
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
107747419
NCBI-ProteinID:
XP_016417428
UniProt:
A0A673HRS0
LinkDB
All DBs
Position
Unknown
AA seq
731 aa
AA seq
DB search
MSNPGTRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVKSTLDP
KWNQHYDLYIGKTDSITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCK
LNPSDSDAVRGQIVVSLQTRDRIGSGGPVVDCRGLVENEGPVFEDSGPGRPLSCFMEEPM
PYTDPTGAAGGGNCRALESPNQEQRLQAQRIRNQDSRGHAHTPQNRPHGPQSPDLPEGYE
QRTTVQGQVYFLHTQTGVSTWHDPRIPRDLNSVSCEELGPLPPGWEIRSTVSGRIYFVDH
NNRTTQFTDPRLHHIMSQHSQVKESSQALPVQIEVGMEEGDGELPVRYERDLVQKLKVLR
HELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVARE
WLYLLCHEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYI
NGGFTLPFYKQLLGKPIQLCDLETVDPELHKSLVWILENDITSVLDHTFCVEHNAFGKFL
QHELKPNGKNIPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDNK
ELELIIGGLGKIDLNDWKANTRLKHCVADSNIVKWFWQAVESFDEERRGRLLQFVTGSTR
VPLQGFKALQGSTGSAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLT
AVEETCGFAVE
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcctgggactcgaaggaacgggtcaagcatcaaaatccgactgacagtatta
tgtgccaagaatctggcaaagaaagacttctttcggttgcctgatcctttcgccaaagtg
gtggtggatggctcgggtcaatgccactctacagacacggtcaaaagcacattggacccc
aagtggaatcagcattacgacctgtatattgggaagactgattccatcaccattagcgta
tggaaccacaagaagatccataagaagcagggtgcgggtttcttaggctgtgtgcggctc
ctgtccaacgccatcagcagactaaaagacaccggctaccagcgtttagacttatgcaag
ttgaacccatctgacagtgatgctgtccgtggacaaatcgttgtgagtctgcagaccaga
gacagaattggcagtggagggcctgtggtcgactgtagaggactggtagagaatgaaggg
cctgtctttgaagactcggggcccgggcggcctctcagctgcttcatggaggagcccatg
ccatacacagatcctacaggagccgctggtggaggcaactgccgtgcactcgagtcgccc
aatcaggagcaacggctccaagcacaacgcatcagaaaccaagattccagagggcatgca
cacaccccccaaaacagaccacacggaccccaatcccctgacctccctgagggctatgag
caaagaaccaccgtgcagggccaagtctattttctgcacacacagactggcgtgagcacc
tggcatgatcccagaataccccgggatttgaacagcgtgagttgtgaggagctgggccct
ctgccgcccggctgggagatcaggagcactgtgtcaggacgaatttattttgtcgaccac
aataatagaaccacgcaattcaccgaccccaggttacaccacatcatgagccaacactct
caggtgaaggagtcgagccaggctctgcccgtacagatagaagttggcatggaggaaggt
gatggcgagttaccggtgcgctacgagagagatctggtccagaaactcaaagttctccgc
catgagctctccctgcagcagcctcaagccggccactgccgcatagaagtgtcccgcgag
gagatctttgaggagtcttatagacagatcatgaagatgagacccaaagacctgaagaag
cggctgatggtgaagttcagaggagaggaggggctggattacggtggagttgctagggaa
tggttgtatctcctctgccatgagatgctgaatccatactacggcctgtttcagtactcg
actgataacatctacacactacagatcaacccagactcatccatcaaccctgaccacttg
tcttacttccactttgttgggcggattatgggtctggctgttttccacgggcactacatc
aatggaggcttcaccttgcccttctacaagcagctcctggggaagcccatccaactttgt
gaccttgagactgtggacccagagctgcacaagagcctcgtctggatactagagaatgac
atcacatctgttttggaccacaccttctgcgtagaacataatgcttttggcaaattcctc
caacatgagctgaaaccaaacggcaagaacatcccggtcacagaggagaacaagaaagaa
tatgtgaggctgtatgtcaactggagattcatgcgtggcattgaggcccaattccttgcc
ctgcagaagggcttcaacgaactcataccacagcatctgctcaagccttttgacaacaag
gaacttgagctgatcatcggaggtttgggcaagatcgatctgaacgactggaaggccaac
acacggctgaagcactgtgtggctgacagtaacatagtgaagtggttctggcaggcagtt
gaatcgtttgacgaggagaggagaggcagactgttacagttcgtcacaggctccacacgt
gtccctctacaaggcttcaaagcactgcaaggttctacaggttctgcaggaccaagactc
ttcactattcatttaattgatgccaacacagacaacctgcccaaagcccacacatgcttc
aaccggatcgacatcccgccttacgagtcatacgagaagctctacgagaagctcctgacg
gccgtggaggagacatgtggctttgcagtggagtga
DBGET
integrated database retrieval system
