Sinocyclocheilus rhinocerous: 107747466
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Entry
107747466 CDS
T04916
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1 isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
107747466
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
srx04040
]
107747466
Ion channels [BR:
srx04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
107747466
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
TagF_N
Motif
Other DBs
NCBI-GeneID:
107747466
NCBI-ProteinID:
XP_016417464
LinkDB
All DBs
Position
Unknown
AA seq
1274 aa
AA seq
DB search
MLAVADGNGSYGGSSSSRMSNNINLNKKPDSFVSISKMDLIIPFSPDVPCDNNGQRMWWA
FLASSMVTFFGGLFIILLWRTLKYLWTVCCHCNIKNKEAQKVNNPMNSQADGQPKNPNDK
DDAPASEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALGIYFIDSSDPIESCQN
FYKDFTLQIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRSW
LGLRFLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDPW
ENFQNSQPLSYWECVYLLMVTMSTVGYGDVYARTTLGRLFMVFFILGGLAMFASYVPEII
ELIGNRKKYGGSYSAVNGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNISP
NLELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCADPDAEDASNIMR
VISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKAGFIAQSCLAQGL
STMLANLFSMRSYIKIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPTVCELCYVKLKL
LLIAVEYKSEQRESSILINPGNHVKMQEGTLGFFIASDAKEVKRAFFYCKACHDDITDPK
RIKKCGCKRMTYSKMSVYKRMKLACCFDCGHSERDCSCMSGSVHSNMDSLQRAFPLSSVS
VHDCSTSLRASKYKFNGYVRSLEDEHPSTLSPKKKQRNGGMRNSPNCSPKMMRHDPLLIP
GNEQIENMDANVKIYDSTGMFHWCPSKDIEKVILTRSEASMTVLSGHVVVCIFGDVTSAL
VGLRNLVMPLRASNFHYHELKPIVFVGSLDYLRREWETLHNFPKVSILPGTPLSRADLRA
VNINLCDMCVILSANQNNIDDASLQDKECILATLNIKSMQFDDSIGVLQANSQGFTPPGM
DRSSADNSPVHGLVRQASITTGSNIPIITELVNDSNVQFLDQDDDDDPDTELYLTQPFAC
GTAFAISVLDSLMSATYFNDNILTLIRTLVTGGATPELEGLLAEENALRGGYSTPQTLAN
RDRCRVAQLALYDGPFADLGDGGCYGDLFCKALKTYNMLCFGIYRLRDAHLCATSQCTKR
YVITNPPYEFELVPTDLIFCLMQFDHNAGQSRASLSHSSHSSHSSSKKSSSVHSIPATNR
QNRSSKAREARDKQNATRMNRMGPEKRWFTDEAENAYPRNIQIKPMSTHMANQINQYKST
SSLIPPIREVEDEC
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgctagctgtggcagatggcaacggatcatatggcggcagcagcagctctagaatgagt
aataatatcaatttgaataaaaaaccggactcttttgtttctatatcgaagatggacctg
atcatcccgttctcaccagacgtaccctgtgacaacaatggtcagcgcatgtggtgggct
ttcctcgcctcatccatggtgacgttctttgggggtctcttcatcattctcctgtggagg
acccttaagtacctgtggacggtctgctgccattgcaacatcaaaaacaaggaggcacag
aaggtgaataaccctatgaacagtcaggctgatggccaaccgaagaacccgaatgataaa
gatgacgccccagccagcgaggtgggctggatgacctcagtcaaagactgggcgggggtc
atgatctcagcacagacccttaccggcagagttctggtggtgttggtctttgcactcagc
atcggagctctgggaatatacttcatagattcttcggatcctatagaatcctgtcagaat
ttctacaaagacttcacgttacaaattgacatggcattcaacgtgttcttcttactctac
tttggcctgcgtttcatagcagccaatgataagctgtggttctggttggaggtgaactca
gtggtggacttctttacagtaccgcccgtgtttgtgtcagtgtatctgaacaggagctgg
ctgggtctgaggtttctaagagccttgagattgatacagttctcagaaattttacagttt
ttgaatatcttaaaaacaagtaattccatcaagctggtgaacctgtgttccatcttcata
agcacatggctcactgctgcaggattcattcatctggtggaaaactcaggggatccatgg
gaaaacttccaaaactctcaaccgctctcatattgggaatgtgtgtacttattaatggtc
accatgtccacggtgggatatggagatgtctatgcaagaaccactcttggacgccttttc
atggtcttcttcattctcggtggtctggccatgtttgccagctacgtccctgaaatcata
gagttaataggaaaccgcaagaaatatggtggttcctatagtgcggtaaatggcagaaag
cacattgtggtctgtggtcatatcacgctcgaaagtgtttccaacttccttaaagacttc
ctacacaaggacagggatgatgtcaatgtagaaattgtttttcttcataatatttcccct
aatcttgagctggaagccttgttcaaacgtcacttcactcaggtggaattctatcaagga
tcggtcctcaacccgcatgatctagcaagagtaaagatcgagtcagcggacgcctgcttg
attcttgcaaacaaatactgtgcagaccccgatgctgaagatgcctctaatatcatgaga
gtaatatctatcaagaactaccatccaaagatcagaataatcactcaaatgttgcagtac
cacaacaaggcccatctgctaaacattcccagctggaactggaaggagggtgatgatgcg
atctgcctggccgagctgaaggcaggcttcatagcccagagctgcctggcacagggcctg
tccaccatgctcgccaacctcttctccatgaggtcatatatcaagattgaggaggacaca
tggcagaagtattatctggagggagtggccaatgaaatgtacacggagtacctgtccagt
gcctttgtggggctttcatttcctacagtttgtgagctgtgctatgtgaagctcaagttg
ttgttgatcgctgttgagtacaagtcagagcagagggaaagcagtattctgatcaacccg
ggaaatcatgttaagatgcaggaggggacactgggattcttcatcgccagtgatgccaaa
gaggtgaaaagagcatttttctactgcaaagcatgtcatgatgacatcacagatcccaaa
aggattaaaaagtgtggctgcaagagaatgacatattccaagatgtccgtctacaagcga
atgaaactggcatgttgttttgattgcgggcactctgagcgcgactgctcgtgcatgtca
ggcagtgtacatagtaacatggacagtcttcagagggccttcccactttcttctgtctct
gttcatgattgctcaaccagtttacgtgcctccaaatataagtttaacggatatgtcaga
tcactcgaagatgagcatccgtcaacactgtcgcccaaaaagaagcaacgcaacggaggc
atgcgaaattcacccaactgctcacccaaaatgatgaggcacgaccctctactcattccg
ggaaatgagcagattgagaacatggatgctaatgtgaaaatatacgactctactggaatg
tttcactggtgtccgtccaaagatattgagaaggtcattctgacacgcagcgaggcctcc
atgacggttttaagtggacatgtagtagtctgtatatttggagatgtcacgtcagcttta
gtggggcttcgaaacttggtgatgcctttgagagcaagcaacttccattaccacgagcta
aagcccatcgtgtttgtgggctcattagattatctgagaagagagtgggaaacccttcac
aacttccctaaagtctccatcttacctggtacgccattaagtcgagctgatttaagggcc
gtcaacatcaacctctgtgacatgtgcgttatcctgtcagccaatcagaacaatatcgat
gatgcttcactgcaggacaaggaatgcatcttggcgactcttaacatcaaatctatgcag
tttgatgacagcattggggtcttgcaggctaattcccaaggtttcacacctccagggatg
gataggtcatctgcagataacagtccagtgcacggcttagtgcggcaggcatccatcacc
acgggatcaaacatcccgatcataactgaactcgtgaatgactccaacgttcagtttttg
gaccaagacgacgatgacgacccagatacggagctgtatctgacccagccgtttgcctgc
ggtaccgcgttcgccatcagcgtgttggactccctgatgagtgcgacatacttcaatgat
aatatcctcaccctgatccggacactggtcacaggaggcgccactccggagctggagggc
ctgctggctgaggagaatgcactgagaggtggctacagcacgccgcagacgctggctaac
agggacaggtgtcgggtcgcccagctggccctctacgatgggcccttcgcagacttgggg
gatggtggttgctacggagacttattttgtaaagcattaaaaacgtacaacatgctgtgc
tttggaatctatagattgcgagatgcacatttatgtgcaactagccagtgcacaaaaaga
tatgtcatcacaaacccgccttatgagtttgagctggtgcccacggacctgatcttctgt
ctgatgcagtttgaccacaacgcgggccagtcccgagcgagcctgtcccactcctcccat
tcctctcattcatccagcaagaagagctcatctgttcactccatccccgccacgaaccgg
cagaaccgcagcagcaaagcacgtgaagcccgtgacaaacagaatgcaacaaggatgaat
agaatgggcccagaaaagagatggtttacagatgaagcagaaaacgcatacccaaggaac
attcaaatcaagcccatgagcactcacatggccaaccaaatcaatcagtacaaatccact
agcagtctgattccacctatccgagaagtcgaagatgaatgctga
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