Sinocyclocheilus rhinocerous: 107747550
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Entry
107747550 CDS
T04916
Name
(RefSeq) probable E3 ubiquitin-protein ligase TRIM8
KO
K12001
tripartite motif-containing protein 8 [EC:
2.3.2.27
]
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
srx04121
]
107747550
Enzymes [BR:
srx01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107747550
Ubiquitin system [BR:
srx04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
107747550
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
TRIM_CC
zf-C3HC4_2
zf-RING_2
zf-RING_5
U-box
zf-RING_10
zf-RING_6
RING_XB3-XBAT31
DUF3287
Motif
Other DBs
NCBI-GeneID:
107747550
NCBI-ProteinID:
XP_016417608
UniProt:
A0A673L0J0
LinkDB
All DBs
Position
Unknown
AA seq
566 aa
AA seq
DB search
MSDQLVEMAENWRNCFEEELICPICLHVFVEPVQLPCKHNFCRSCISEAWAKDTANVRCP
ECNHAYNQKPNLEKNIKLTNIVEKFNALNVEKAPAVLHCILCRRGPPLLAQKVCLRCNAP
CCQSHIQTHLQQPCPAPGHLLVGAEEVRAWSCLHHDEYRLYHCDAEQVAVCQYCFFSRCA
PNHGHAVCDVEVRRIDIRHMLMKQQDRIDDRVKDIEEQLYKLESDKLLVEDKVQQLKEEV
RVQYHKMHQLLEDDLGRTLEVLDKAHSKYCQENSTQTLQLNERRQEAKKLLSSVQVVFDK
AEDINFMKNTKPVKILMDRSQSCTGSVLPPYKVGHLNSKIFLSEISKKEKNLRKILEAPF
STPAHFLQSVSVHPSSVNTSGGEKRKHSMAFPESSTSLLESSSGPMSKQQFLGQGSNSTD
GPASQPPMAPCSSTQHIVGLSSSSGAQSVHHSSSVFTPADYPNPSSSQQAMLPQYGGRKI
LMCTMDNCYCSSVPSISNHRGHPPYPRSGSFPWTQDYTHPLPSAPSMSQPLQGLSMHDWI
DASQSHRHPDFYGLYGQSSTKPYVTS
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatcaactggttgagatggctgagaactggcggaactgcttcgaggaggaactc
atttgtcccatttgtttgcatgtgttcgtggagcctgtgcagctgccgtgcaaacacaac
ttctgccggagctgcatcagcgaggcctgggctaaagacacggccaacgtgcgctgccct
gagtgcaaccacgcgtacaatcagaaacccaacctggagaaaaacatcaaactgactaac
attgtagagaagttcaacgcgctgaacgtcgagaaagctccggccgtactgcattgcatt
ctgtgtaggcgagggcctcctctgctagcgcagaaagtgtgtcttcgttgcaatgcaccg
tgttgccagtctcacatccagacgcatctccagcagccctgtcccgctcctggacacctc
ctggtgggggctgaggaggtgcgggcctggagctgcctgcaccacgatgagtacagactc
tatcactgcgatgcggaacaggtggcggtctgccagtactgcttcttctccagatgtgcg
cccaaccacggccacgcggtgtgcgacgtggaagtgcgacgcattgacatcaggcatatg
ttaatgaagcagcaggatcgcattgacgatcgagtgaaagacatcgaggagcagctgtat
aagttggagtctgacaaactactggtggaggataaggtacagcagctgaaggaggaggtg
cgtgtgcagtatcacaaaatgcaccagctcttagaagatgacctggggagaactctagag
gtgctggataaagcacactccaaatactgccaggagaactcaacccaaaccctccagctc
aatgaacgccgtcaggaggccaagaaactgctcagctctgtccaagttgtgtttgacaag
gcagaggatattaactttatgaagaacacaaaaccagtaaaaatactcatggacagatca
cagtcatgcacaggcagtgttctgcctccttacaaagtgggtcatcttaattccaaaata
ttcctgtctgaaatctcaaaaaaggaaaagaacttgagaaaaatactggaagcaccattc
agtactcccgcgcacttcctccagagcgtttctgtccatccctccagtgtgaatacctcc
gggggtgagaaacgcaaacactccatggccttccctgaaagcagcaccagcctgctggag
tcctcgtcaggccccatgagcaaacagcagttcctgggtcaaggttccaactccacagac
gggccggcatcgcagccgcccatggctccctgtagctccacccagcacattgtaggcctc
agcagtagcagcggtgcccagtctgtccatcattccagctccgtttttactcctgccgac
taccccaaccccagctcgtcccagcaggccatgctgccgcagtacggcggccgtaagatt
ctcatgtgcacgatggacaactgctactgctctagtgtcccctccatatctaaccaccgt
ggtcatcctccctacccacgctcgggatctttcccttggacacaggactacacccacccc
ctgccctccgcaccctcaatgtcccagcctctccaggggctctccatgcacgactggatc
gacgcctcacagagccataggcaccctgatttctatggactctacgggcaatcttccact
aaaccatacgtcaccagttaa
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