Sinocyclocheilus rhinocerous: 107747562
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Entry
107747562 CDS
T04916
Name
(RefSeq) protocadherin-20-like
KO
K16498
protocadherin delta 1
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
107747562
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
srx01009
]
107747562
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
srx04515
]
107747562
Protein phosphatases and associated proteins [BR:
srx01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107747562
Cell adhesion molecules [BR:
srx04515
]
Cadherins
Protocadherins
107747562
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
FAM176
CD34_antigen
Motif
Other DBs
NCBI-GeneID:
107747562
NCBI-ProteinID:
XP_016417633
UniProt:
A0A673NCY0
LinkDB
All DBs
Position
Unknown
AA seq
882 aa
AA seq
DB search
MWNTKRGTCLHSKGELWGLFILLLYTSPLSCSSNFSHLIYKIKEGLPKGILIGAIGADLK
LDLSVNPPRSFNLELKMASQQYVNLNNTTGELFTSAVEIDREALCAESHEGQGCAIFLDV
LILPQQYFQLVKVKILIEDVNDNRPHFPVDEIRVSVPENAPVNARFAVEQSAVDPDIGIH
SVQTYWLVNDYGVFTLDVEENEGGELTPFLIITESLDRETQAEYVTDIIAEDGGSPPLLG
TATLRIIITDVNDNCPKFTESLVNVTLYGNATKGMQLARLQAYDPDEGASALIKYAFSER
VTQESRILFHLDTNTGVLKLAGKIDNNTGKLYKLIVLANGPTCIPEVATVTVHVIKQLSG
PPAVIPRYIASEKDGVVSLSESEPLFSPIAFFTIKNTEPQQKIECLLEGAGPFRLVPYKQ
FKNEYLLETTELLDYEQQQDYEMVVVVHNSHGLVVNTVVKVHVLDVNDNTPVFKQSFIDI
TVEENNPPNTFLAQLQATDADSESRGEVYYLLGADAPTIFDLDRSTGVLTVSTSLDREEK
ETYRFMVRAVDRGTPRKESIATVIITVQDRNDNSPRFINKDFTFFVPENFPGFGEIGVLT
VTDADAGENGWVALSILNGSDIFVIDTGRGALRAKTPLDREQQGTYYVWIEAIDGGEPAL
SCITMVTVLLLDVNDNPPTVLFPQSNQSFMLVLPNTLPGTSITEVYAVDRDTGMNAVIAY
SIIKRTDGEPGSFDIDPYTGNITLRKALSNRGLYSLWVKVRDHGQPELYSTVLVNLFVNE
TVSNETLIQSLLPRSVDIDHGELPPDKEGRKGEQVPNMCGEYQVLLLALTATCLGLFLTV
VSLVTYICCKKRKPKKKRLDIEIPLKLNHEMVDKNPMEISNI
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgtggaacactaaaagaggaacctgcctgcacagcaaaggagagttatggggtttgttc
atcctcctcttgtacaccagtcccctctcctgctcgtcaaatttcagtcacctcatctat
aagataaaagaaggattacctaaagggatactcataggggctatcggtgcagacttaaaa
ttggatctttctgtcaatcctcctcgttcattcaatctggagctaaagatggccagccag
cagtacgtgaatctgaataacacgacgggggagctgttcacatctgccgtggagattgac
agagaggctctgtgcgcggagtcccacgagggccagggctgcgcaatctttctggacgtg
ctaatccttcctcaacagtactttcagctggttaaggttaaaattcttattgaggatgtg
aatgacaaccgcccgcatttccccgttgacgaaatcagggtgtctgtgccggagaacgca
cctgttaacgcaaggtttgcggtggagcaatccgcagtggatcctgacatcgggattcac
agcgttcaaacatactggcttgttaatgactatggagttttcacattagacgtagaggag
aacgaaggcggtgaactgacgccctttctcatcattaccgagtctcttgatagggagaca
caagctgagtatgtgactgacattatagccgaggacggaggctctccgccgcttctaggc
actgcaactctgaggattatcatcacggatgtcaacgacaactgccccaagtttacagag
tcgctagtgaacgttactctttatggaaacgctactaagggcatgcaactggctcgtcta
caagcctacgatccagacgagggagccagcgctttgatcaagtatgccttcagcgaacgg
gtcacccaggaaagcagaatcctgtttcatttggatacaaacactggggttcttaaacta
gcaggaaagattgacaacaacaccggaaaactctacaaactaatcgtgctggccaatggg
ccgacttgtattccagaagttgcaacggttaccgttcacgtaatcaaacagctctccggg
cctccggcggttatcccacgttacattgcttctgagaaggacggtgttgtgagtttaagt
gaatcagagccactgttttcacccattgctttttttaccatcaaaaacaccgagccacaa
cagaagatagagtgtcttcttgaaggtgcaggtccttttaggcttgtaccgtataagcag
tttaaaaacgagtacctgcttgagaccaccgagctattggattatgagcagcaacaggat
tatgaaatggttgttgtggttcataactctcatggattagtagtgaacaccgtagtgaaa
gtccacgtgttggacgttaacgacaacactccggttttcaagcaatctttcattgacatc
acagtggaggagaacaacccaccaaatacattcctcgctcagcttcaggccaccgatgca
gacagtgaaagcagaggcgaggtgtattacctactcggtgccgacgctcccaccattttt
gacttggataggtcaaccggggtactgacagtgtccacttctcttgaccgggaggaaaag
gagacgtatcgtttcatggtgcgagccgtagaccgtggcacgccgagaaaggagtcaatc
gccactgtgattatcaccgtccaggatcggaatgacaacagtccaaggttcatcaacaag
gacttcaccttctttgtgccagagaactttccaggttttggggaaattggcgttcttact
gtcacagacgcggatgctggggagaacggctgggtggcgttgtccatccttaatgggagc
gacatcttcgtaattgacaccggacgaggagcgttgcgagccaagacccctctggaccgg
gagcaacagggaacgtattacgtttggatcgaggcaattgatggaggcgaacctgctctt
tcttgcatcacaatggtgactgttctcctcctggatgtcaacgataaccctccaactgtt
cttttcccccagtccaaccagtcgttcatgttggtacttcccaacacgcttccgggaacg
tctataacggaggtttacgcggtggaccgggacactggaatgaatgctgttattgcgtac
agcatcatcaagagaacggatggagagccaggctcgtttgacatcgacccctacacggga
aacatcaccttgaggaaagccttgagcaatcgaggcctctacagtttgtgggtcaaagtc
agagaccatggtcaaccagaactctactctaccgtactggtcaacctgtttgtgaatgaa
acagtcagcaatgagaccctcattcagagtttgttgcccagaagtgtagatattgaccat
ggtgagcttcctccagataaggaagggaggaagggagaacaagtgccaaacatgtgtggc
gagtaccaagtgttactgcttgcactgacagctacctgcctgggattgtttctgaccgtt
gtgtcgttggtgacatacatttgctgcaagaaaagaaaaccgaaaaagaagaggttagac
attgagattcctttaaaactcaaccatgaaatggtggacaagaacccaatggagatttca
aacatctga
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