Sinocyclocheilus rhinocerous: 107747943
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Entry
107747943 CDS
T04916
Symbol
arid1b
Name
(RefSeq) AT-rich interactive domain-containing protein 1B isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107747943 (arid1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srx03000
]
107747943 (arid1b)
03021 Transcription machinery [BR:
srx03021
]
107747943 (arid1b)
03036 Chromosome and associated proteins [BR:
srx03036
]
107747943 (arid1b)
Transcription factors [BR:
srx03000
]
Eukaryotic type
Helix-turn-helix
ARID
107747943 (arid1b)
Transcription machinery [BR:
srx03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107747943 (arid1b)
Chromosome and associated proteins [BR:
srx03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
107747943 (arid1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Rv0078B
Motif
Other DBs
NCBI-GeneID:
107747943
NCBI-ProteinID:
XP_016418045
LinkDB
All DBs
Position
Unknown
AA seq
2160 aa
AA seq
DB search
METGLVANHQVTNVGSGDPPPSPHHRTPPQQQSQASFHQQRAVHNNNINPTPARGDRQQH
GGKENALETQVDRHLCLLNTSDEEERSSKTGGDRMGSRYEHSNFGPSSNNNNNNSGGGGG
GASQSGNSSVSELNHYYGNGRGGPCFDQHGGQQSPRTALMHQAQGSMDQVQNSHEGYHNN
PYNHYPNYRPGYGGAGYGMMSPSRQGNMMGPGTNSPTAAAASHGKAAMASTTPAPGANVG
GFQRFPGQNQQHPSGATPTLNQLLTSPSPMMRGYCSGYQDYSNPQQQQSGMGLGKDLSSP
YSPAASHGWGAQQRNHPAMSPGNNGNSRAQQVAPMDPMAMKRSQMYGMGNSPYSQPGGTY
PGQPYGSPTPHRYPMGMQGRGQVGMGGMQYPQQQQMPAQYGPQGMGGYCQQGQPPYFSPP
QHQSAAPSQPHYMQQRAPTQQETLQEGYGSRGQSGKPNHDDMGLTQQDRPSSLPDLSGSI
DDLPTGTEAGLSSAVSASGSTSSQGEQSNPAQSPFSPHASPRVPSMRSGPSPSPVGSPVG
SSQSRSGPISPASGPGTQMAPQTPGNVPDVGSHSTHSQSPMSQERGFAPNMQSNAPGPQF
VGQQPGPSMSPHSCPTGPVHHSVGSYQLGPSYGPQSGQYGPSGNYPRPSNYGGAPGANYS
GPGPGMVNSLGMNASSPMHGQGPGQPCGSVTTARGPGQAASGRPYPAGSSSVAPTSPNMP
QSAGPGMGPPPPNVSRKPHESGPASGQQNPVPSGQPRPPFGRSPVYPGLSGPGGRSASFP
IPHPHHPHYSSGQGQGQPHAELYGPGGYQGGPHMLGMGPAGPYNHPPSNSSARMTPQGLS
YNTMPTGPMTGSGDSMMPTDPKQRAEHKEEGSTPTTEPPKPKDNYGSQCVSQPPTPSPLS
PSPASLSSYQGDDSDSISSPAWPKNPSSPKHILGNMTNEKITRLYDMGCEPERRAWVDRY
ITFMEERGTPVPNLPSVGKKPLDLCRLYLCVREIGGLAMVNKNKKWRELSTHLNVGTSSS
SASSLKKQYIQYLFTYECKVERGEEPPPDAFTMGDSKKQPQQAKIQPPSPANSGSLQGPQ
TPQSTGSSTMTEMPGDLKPPTPATTPHGQVTPQPTGRNSGVSVQDPFSESSDPAFQKRGP
MHGGGGSGDATSRMQFDTSKDPYGAARKGGSEPFMPGQMPGSGMQDMYPRGPPSGMGMGP
RPQYPYNPGFERRPDHVMGPEGGIAPPGNQNNMVPSNSDPSMFSGNRYASHQRHGHDGYG
QQYPHSMPYGAHGMYPQQQGYKRPGEGMYGPPTKRHESEAYGLQYGGQQPDMYSQYGYPE
HRPMQSPFPYTYGRDRMQPGGQGPPQHSMMSGGPPPSSNSSGGPQGNMWHTRHDMSYPYP
SRQAHGVPYPSMSRGDDPEIRASQDSQWPGQRQSPYPPHSLSSSSSMPPMASRQPPSSYQ
SPPAMPNHISRVPSPAPFPRSVGGSMSPNKAHMMASMKQMQKPGGPGSMPSSHSGLPGQG
FPTIHREVTYPLDSVEATQPQLKPRRRLTSKEIGTPEAWRVMMSLKSGLLAESTWALDTI
NILLYDDNTVSSFGLSQMPGFLELIVEYFRRCLIEIFGILEEYEVGTEGQKTLLGPCSEP
SETEQPSKQDLKRQSSTEHVGRLDVEPEKPQPSSSAAALNMEKREDSPEGKADTAKEPCP
PVEPRPKQASKYDKLPVKVEEREAVADCVEDRSELLGLAGEFTSGLLHWKAGGGDSTAHI
QTHFEKRREEEAKQKLLENQEGSQAPGQETVEEEHGREEELKRELPGPSEENLTATVDDM
LRSRPGSLSGGETQTSFPFRNRENQSSITLLEDEPRCWDEAPLSVAEGWQDELAKRCICV
SNIIRGLSFVPANDSELAQHPGLVLILGKLVLLHHEHPKRKRMLPTYQREEERGLACSKD
EWWWDCLGALRENTLVTLANISGQLDLSIYPESICLPILDGLLHWMVCPSAEAQDPFCTA
NGFSSLTPQRLVLECLCKLSIQDSNVDLLLATPPFSRQERFFATLVRHVGERKSQVCREM
AVAILSNLAQGDPTAARAVALQKGSVGALISFLEDSVSMAQYQQSPHSLLHMGHPTHPEP
PSINMMCRAVKALLAMAQVEENRPEFVLYESRLLDISLSSMLNSGVAAILCEVLFKLGRS
NT seq
6483 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgggtctggtcgcgaatcatcaagtgacaaatgttggaagcggagatccccct
ccttcgcctcatcatcgcacacctccacagcaacagtcgcaagcatcattccatcagcag
cgagccgtgcacaacaacaacatcaacccgacacccgcgcgcggagatcgacagcagcat
ggagggaaagagaacgctctggagacgcaggtcgatcgccatctgtgtttgctgaacaca
agcgacgaggaggagcgctcgtccaaaaccgggggggatcggatgggcagcaggtacgag
cactccaactttggaccatcgagcaacaataacaacaacaacagcggcggcggcggcggt
ggcgcgtcccaaagcgggaacagctccgtttctgagttgaatcattattacgggaatgga
agaggagggccttgctttgatcaacatggcggacaacaaagccctaggacggctttaatg
catcaagcacagggcagcatggatcaagtgcaaaactcccacgaagggtaccataataat
ccatacaaccactatcccaactaccggccggggtacggtggcgctggatacggtatgatg
agcccatcgcggcaggggaacatgatgggccccggtaccaattcgcctaccgccgctgct
gctagtcatggcaaggctgctatggcctcaactaccccagctcccggtgccaacgttggg
ggctttcagaggttccccggacaaaaccagcagcacccttctggagctacacccacccta
aaccagctcctgacatctccgagtccgatgatgcgcggatattgcagcggttatcaagat
tacagtaacccgcagcagcagcagtccgggatgggtttgggcaaagacttgagctccccg
tacagcccagctgccagccacggctggggagcacaacaaagaaaccacccggccatgagc
cctgggaataacgggaacagcagagctcagcaggtggcacctatggaccctatggccatg
aagcgttctcagatgtatgggatgggcaacagtccctactctcagccgggcggaacatat
ccagggcagccatacggatcacccactcctcaccgatacccaatgggaatgcaggggcgt
ggccaagtgggcatgggagggatgcagtaccctcagcaacagcagatgccggctcaatat
gggccacagggaatgggcggctactgtcaacagggtcagcccccatacttcagtcctcca
cagcatcagtctgcagccccctctcaaccccactacatgcagcagcgcgctccaacacaa
caggagactctgcaggagggatatggtagcaggggccagtctgggaaaccaaaccacgat
gacatgggtcttactcagcaggaccgcccgtccagcctcccggatctgtctggctctata
gacgacctccccaccggaacagaggcgggtctcagttcggccgtcagcgcttcgggttcc
accagtagccagggagaacagagtaaccccgcccagtcacccttctcgccccacgcctcg
ccccgggtccccagcatgcgcagcgggccctcgccctcgccggttggatcacctgtgggt
tccagccaatcacgatctgggcccatatcacctgccagtgggccaggtacacagatggcc
cctcagaccccagggaacgttccagacgtgggctcacattccactcacagtcagtcgccc
atgtctcaggagagaggatttgcacctaacatgcagagcaatgcacctggtccccagttt
gtaggccagcagcctggaccttctatgtctccacactcctgtcccactggccctgtgcac
catagtgtgggctcctatcagctgggcccctcttatgggcctcagagtggccagtatggt
ccttcaggtaactacccacgcccttctaactatggcggagcaccaggtgccaactacagc
ggccccggcccaggcatggtcaacagtcttggcatgaatgccagcagtccaatgcacggg
cagggtccagggcaaccctgtggctctgtgaccacggctcgaggaccagggcaagcagcc
agtggccggccgtacccagcaggctccagcagtgtggctccaacctcacccaacatgcct
cagtctgctggcccaggaatgggtccacctcctcccaacgtcagtcgcaaaccccacgag
agtggccctgcatctggccagcagaacccagtcccctctggacagcccaggcctcccttt
ggcaggtcccctgtatacccaggcctgtctgggcctgggggacggtcagcctccttccct
atccctcacccccatcaccctcactacagttctgggcaaggccaggggcagcctcacgct
gagctatatgggccaggcgggtatcagggtgggccccacatgcttgggatgggtcctgca
ggcccctacaaccatccaccgagcaacagctcagccaggatgacccctcaaggactgtcc
tacaacacaatgcccacagggcccatgacaggctcaggggacagcatgatgcccaccgat
cccaaacagagagctgagcacaaggaggagggcagcacacccaccacagagcctcctaag
ccaaaggacaactacggctctcagtgtgtgtcccagcctcccaccccgtcccctctgtcc
cccagcccagctagtctgtcctcttatcagggggacgacagcgatagcattagcagccct
gcctggccaaagaaccccagcagccctaagcacattttggggaacatgacaaacgagaag
ataacacggctgtacgacatgggctgtgagccggagaggagggcatgggtggatcgctac
atcaccttcatggaggagaggggcacgcctgtccccaacctgccttcagtgggcaagaag
ccgctggatctgtgccgcctctacctctgtgttcgagaaatcggaggcttggctatggta
aataagaacaagaaatggagagagctgtccacccacctgaatgtggggacatccagcagc
tctgccagttccctcaagaagcagtacatccaatacctgttcacctacgagtgcaaggtg
gagcgcggagaggaacccccacccgatgcgttcaccatgggagacagcaagaagcagcca
cagcaggccaagatccagccaccctcacctgcaaactcaggctctcttcaagggccgcag
actcctcaatctacaggcagcagcactatgacagagatgccaggggacctaaagccgcct
acaccagctaccacaccccacggacaagtgacccctcagccaactggcagaaacagtggt
gttagtgtgcaagatccgttctctgaaagcagtgacccagccttccaaaagcgaggcccc
atgcatggaggaggaggcagcggagatgccacctctagaatgcagtttgacaccagtaag
gatccctatggagctgctaggaaaggtggctctgagcccttcatgccagggcagatgcca
ggtagtggcatgcaggatatgtatccacgtggaccgccctcagggatgggtatgggccca
cgaccccagtacccctacaaccctggttttgagaggaggccagaccatgtcatgggtcca
gaggggggaattgctccccctggaaatcagaacaacatggtgccttccaatagtgatccc
agcatgttctcaggcaatagatacgcctctcatcagagacatggacatgacggctatggg
cagcagtaccctcacagtatgccatatggcgcacatgggatgtatccccaacagcagggt
tataagcggcctggggaagggatgtatggccctcctactaagcgccatgagagtgaagcc
tatggtttgcagtacggtggccagcagcctgacatgtatagtcaatatggttacccagag
cacagacccatgcaaagtccattcccctatacatatggccgtgatcgcatgcagccaggt
gggcagggacctcctcagcacagcatgatgagtggtggaccacccccatcctccaactcc
agcggtggtcctcaagggaacatgtggcacaccaggcacgacatgagttacccttacccc
agccggcaggctcatggggtcccctacccctccatgagccgtggagatgatccagaaatc
agggctagtcaggacagtcagtggcctggtcagcgtcaatccccctacccaccacactct
ttgtcctcttccagctccatgccccccatggctagccggcaaccaccttcttcctatcaa
tctcctccagcgatgccaaaccatatctctcgagtcccaagccctgcaccattccctcgg
tctgtgggtggctctatgtcacccaataaggctcatatgatggcctctatgaaacagatg
caaaagccgggtggcccagggtcgatgccaagctctcatagtggtcttcctgggcaaggc
ttcccgacaatccatcgggaagtcacttacccactggactctgtggaagctacgcagcct
cagcttaaacctcgccgaaggttaacatccaaagaaattggcacaccagaggcttggcgt
gtgatgatgtccctgaagtctggtttgcttgctgagagcacatgggccctggatactata
aacatcctgctttatgatgacaacacagtgtcttcctttggcctgtctcagatgcccggt
ttcttggagctcattgtggaatatttcagaaggtgcttaatagagatctttgggatcctt
gaagaatatgaagttggaacagagggtcagaaaactcttcttggtccatgttcggagccc
tcagaaacagagcaaccttccaaacaagacttaaaaagacaatccagtacagaacatgtg
gggagattagatgtggagcctgagaaacctcagccaagcagctcagcagcagcactcaat
atggagaaaagggaagactctcccgagggtaaggccgacactgctaaagaaccatgtcct
ccagtggagcccagacccaagcaagccagcaagtatgacaaactcccagtgaaagttgag
gagagagaggctgtggctgattgtgtggaggatcgatcagagctgctaggcctggccggg
gagttcaccagcgggcttctgcattggaaggcaggcggaggggactccactgcccatatc
cagacccatttcgagaaacgtagggaagaagaagcaaaacagaagctcttagagaatcag
gaaggttcacaggcaccaggacaagaaacggttgaagaggagcacgggagggaagaggaa
ctgaaaagagagcttccagggccctcagaggagaacttgacagccactgtggatgacatg
ctacgttctcgtccagggtccttatcaggaggtgaaacccagacatcattccccttccgc
aacagagagaaccagagcagcattactttgctggaggatgagccccgatgctgggatgaa
gcacctctttcagtcgccgagggctggcaggatgagttggccaagcgctgcatctgtgtg
tccaatatcattcgtggactctccttcgtcccggccaatgacagcgaattggctcagcac
ccaggtttagtgctcattctcggaaaacttgtgcttctgcatcatgagcaccctaaaagg
aaaaggatgctgccgacctaccagcgagaggaagagcgaggtctggcttgcagcaaggac
gaatggtggtgggactgccttggtgccttgcgtgagaacaccttggtcacccttgccaac
atttcaggacagctagacctgtctatctatccggaaagtatctgccttccaattctggac
gggctgctccactggatggtgtgcccttcggcggaggcccaggaccccttttgcacggca
aatggcttctcctcactcacaccgcagaggctggtgctggagtgtctgtgcaaactgagc
atccaagactctaacgttgaccttctgctggccacgcctccttttagcagacaggagcgc
ttctttgccacattagtgcggcacgtcggtgagcgaaagagtcaggtgtgccgcgagatg
gccgtagccattctctccaatcttgcacagggcgaccccacagctgcccgagccgttgcc
ctgcagaagggcagcgtgggagccttgataagcttcctagaggacagcgtttccatggca
cagtatcagcagagccctcacagtctcttgcacatgggacaccccacccatcccgagcca
cccagcatcaacatgatgtgccgggccgtcaaagccctgctggccatggcccaggtggag
gagaacaggcctgagtttgtgctctacgagagcaggcttcttgatatctcgctgtcctcc
atgctgaactctggcgtggcggccatcctgtgtgaggtactgtttaagctcggccgctcg
tga
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integrated database retrieval system
