Sinocyclocheilus rhinocerous: 107748310
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Entry
107748310 CDS
T04916
Symbol
topbp1
Name
(RefSeq) DNA topoisomerase 2-binding protein 1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107748310 (topbp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srx03032
]
107748310 (topbp1)
03400 DNA repair and recombination proteins [BR:
srx03400
]
107748310 (topbp1)
DNA replication proteins [BR:
srx03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
107748310 (topbp1)
DNA repair and recombination proteins [BR:
srx03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
107748310 (topbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
TopBP1_BRCT0
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
LIG3_BRCT
ECT2_BRCT0
BRCT_TopB1_SLF1
Motif
Other DBs
NCBI-GeneID:
107748310
NCBI-ProteinID:
XP_016418541
LinkDB
All DBs
Position
Unknown
AA seq
1312 aa
AA seq
DB search
MSKSNKETYIVKFVERNGQKSDLALQAYKAIVELQSEKYVQTLDEEATLKLDHNDKSLFV
FSDFTSNAFDHCRRLGCRIVSPLVVLFCLQKHRCVPKAEQPVYNMAMADVTTSCTNLDKE
ARSEVMDLVQLMGGRVYRDLNVSVTHLVAGEVGSKKYLVAASLGKPILLPSWVKACWEKS
QDSVFHHSELNTEDYQCPVLKGCTVCVTGLSTVERKEVQRLCGQNGGNYTGQLKMNECTH
LIVSEPTGQKYEFARKWNVYCVSLHWLFDSIEKGFCQDESRYAVERGKKRAEEKPGRPNT
STPTGPNRSKEEGPSLLGLSHISNISMNVNETVLTTAGISHIETPDPVDSFDITVCRVDD
LLDGCKLYLCGLSGKKLEKLRRMVNSAGGLRFNQPSQELTHIVMGEPDPGVKVFLDKATH
RPHIVTVQWLLDSFSRGSLLPEDDYFHPSFLPPAPAAVDMPAPHKAAPRASRPSVAPPPA
PSPGRQARAEEDLLSQYMENDQTVVELPQATNSTSSRQSVLLPEPPPAVKDSTLVETSVG
GLFAGKRFILVGFGAESEAQLSELVMENAGKILVGRSRAVAHYAIVPLLGCDVEATVDEV
ATDTWLAMCVEQQCVLPLPSHPLFTPVAVREGFSPLKDCVLSVSQFTGAERESLIQLAKH
LGARANLMFSYFSPPTHLSAVFTSLAAMTASPQLGKEPEPEVEQKAAAPLIGVVVCVSKK
LSKKQSELNAVAASLGADFRWSCDNSVTHYIYQGKVGDNSKEYKAVKERGLHIVSQHWLQ
ACADEQKHVSESLYPFTFNPKMSLTMSQVADSTQRSPPPSTPRTRLREFTQNEETRLSPV
DSITDISTPQRGSVGEPEKDQTVSTERNLTETLEMRESLQRQLQEIMSATKLTSGRRGSS
RLARTGSGGLDSPHTPDSLGRMGRRSRTLEALRMSRQVAVDLNTEPSQSEQIVWDDPTAR
EERAKLADNLQWPGSPSQHSETIVPPPLSDHTARDSMTDSELVEMAAFEVIDAQLKPKVT
PPPAETLQNRETPEALTLAFPTSKPAVPSLPQIEDKEEVKDPPRFLLSSLNPQERIDYSH
LIEELGGVVLEKQSFDPSCTHVIVGYPLRNEKYLAAMAAGKWILHRSYLEACRAEGHFIE
EEQYEWGSSSILDALPSINSQQKRLALAAMRWRKTLQGSSNKEGAFGGWTVMLNIDQARE
AGFRRLLQSGAAKVLPDPSPSLFKETTHLFVDFSRLKPGDGRVDVSEAAAQGVKCLKPEY
IADYLMLEPSPSMDAYYLPGAATDDLEKVQDTSSRKRKASGEMSRLKKSRVR
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaagcaacaaggagacatacattgtgaaatttgttgaacgcaatggacaaaag
agtgatctggctctccaggcctataaggcaatagtggaactgcagtcagagaaatatgtg
cagacgctggatgaggaagccacactaaagctggaccacaatgacaagtccctgtttgtt
ttcagtgacttcaccagcaatgcctttgaccactgcaggaggctgggatgcaggatcgtg
agtcctctggtagtgctgttctgtctgcagaagcatagatgtgtgcccaaagcagagcag
cccgtgtacaacatggccatggctgatgtcactacctcctgcaccaaccttgacaaagag
gcacggagtgaagtgatggatcttgtccagctgatgggtggacgggtctaccgtgatctc
aatgtgtctgttactcacctggtggcaggtgaagtggggagtaagaaatacctggtggcc
gcaagccttgggaagcccattcttttgcccagctgggtgaaagcatgctgggaaaagtct
caggatagtgttttccatcactctgaactgaatacggaggactatcagtgtccagtcctg
aaaggctgtacggtctgtgtgacgggactctctactgtggagcgtaaagaggttcagagg
ttgtgtggccagaatggaggcaattacacagggcagctcaagatgaatgagtgtactcac
cttattgtcagtgaacccacaggtcagaaatatgagtttgcccgtaaatggaacgtatac
tgtgtgtccctgcactggctgtttgacagcatcgagaagggcttctgtcaggatgagagc
aggtatgctgtggagcgtggaaagaagagagcggaggagaagccaggcagacccaacacc
tccactcctacaggacccaacaggagcaaagaggaaggtccctcacttctgggattgagc
catatttccaatataagtatgaatgtcaatgaaacggtcctcaccacagcaggaatcagc
cacatagagactcctgatccagttgactcatttgacatcactgtttgtcgagttgatgac
ctgttggatggctgtaagttatatctgtgtggcttatcaggaaagaaactggagaaactg
cggcggatggtgaactctgccggagggctgcgcttcaaccagcccagccaagagctgaca
catatagtgatgggtgaaccagacccgggggtcaaagtcttccttgacaaagccactcac
agaccccatatagtgaccgtgcagtggttgctggacagtttctcccgtggttccttgctc
ccagaggatgactactttcacccctcctttctgccccctgccccagccgctgttgatatg
cctgctcctcacaaagctgccccccgcgcctccagaccctctgtagctccccctcctgcc
cctagtccaggccgacaagccagagcagaggaagacctgctttcacagtacatggagaat
gaccagactgtggtggagctgcctcaggccactaatagtaccagcagcaggcagagtgtt
ttgcttccagagcctccacctgcagtaaaggactccaccttggttgaaacctcagtgggt
ggactttttgcagggaagcgttttatcttggttggttttggagctgagtctgaagcgcaa
ctctcagagctagtcatggaaaatgctgggaagatcttggtcggccgctcgagagctgtg
gcgcattatgccatcgtgccactgctgggctgtgatgtggaggccacagtagatgaggtt
gcgacagatacctggctggccatgtgtgtggagcagcagtgtgttttgccactaccctct
catcctctgttcactccagtagcagtgagagaaggcttctctcctctcaaagactgtgtg
ctgtccgtcagtcagttcactggagctgagcgagagtctctcattcagcttgccaaacac
ctgggagcgagagctaatctaatgttttcttatttctctccccctacacatctgtctgca
gtgttcacaagtctcgcagccatgactgccagtccacaactgggaaaagagcctgaacct
gaggtggagcagaaggctgcagctcctcttattggggtggtggtgtgtgtaagcaagaaa
ttaagcaagaaacagagtgaactcaatgcagtggccgcctctttaggtgcagacttcagg
tggtcgtgtgacaactctgtcactcactacatctaccagggtaaagtaggagacaacagt
aaggaatacaaagctgtcaaagagagaggactgcatatagtgtcacaacactggctacag
gcttgtgcagatgagcagaagcatgtgtctgagtcactctacccttttacattcaacccc
aaaatgagcctcaccatgagtcaggtggcagatagcactcagaggtcacctcctccttcc
accccccgcaccagactcagggagtttacacagaatgaggagaccaggcttagtcctgtt
gacagcatcacagacatctcaacccctcagcgtggcagtgtgggagagcctgagaaagat
cagaccgtcagcactgaaagaaatctcacagaaacacttgagatgagagagagtcttcaa
aggcaacttcaggagatcatgtctgctaccaaactgaccagcggtcgtcgaggctcctcg
cggttggccagaacaggttcagggggactagactcaccccacaccccggacagcctgggg
cgaatgggaagacgcagccgcactttagaggccctacgaatgtcacgtcaagtagctgtg
gacctgaacacagagccgtctcagagtgagcagattgtgtgggatgaccctacagcacga
gaggagagagctaaactggctgataacctgcagtggcctggcagcccctcccagcactct
gaaaccatcgtcccaccgcccctctctgaccacacagccagggactctatgactgactct
gagcttgtggaaatggctgcatttgaagtcatcgatgcacagctgaagccaaaggtgacc
ccacctccagctgagacgctacagaaccgtgaaacacctgaagcactcactcttgctttc
cccacctctaaacctgcagttccttcccttccacagattgaagataaggaggaggtcaag
gatcctccacgattcttgctgtcttcattgaacccacaggaacgcatcgactacagtcat
ctcatagaggagctaggtggtgttgtgctggagaaacagagttttgatcccagctgcact
catgtgattgttggttatcctctgaggaatgagaagtatctggccgctatggcagcgggc
aagtggattcttcatcgctcgtatctggaggcctgtcgtgcagaaggacacttcatagag
gaggagcagtacgagtggggcagcagctctatcctggacgctctgccatccatcaactct
cagcagaagagactggcactggcagccatgcgatggaggaaaacactacaaggcagctca
aacaaggagggtgcgtttgggggctggacggtgatgctgaatattgaccaggccagagag
gctggattcagacggctgctgcagtctggggcagccaaggtgttgccagacccttctcct
tcgctgtttaaagagaccactcacctgtttgtggattttagtcggttaaaaccaggtgac
ggcagagtggatgtcagtgaagctgcagctcagggggtcaaatgtctaaaaccagagtac
attgctgattacctcatgctggagccttctccttcaatggacgcttactatcttcctggt
gcagctacggatgatctagaaaaagttcaagatacatcttcacgcaaacggaaagcctct
ggggaaatgtccagattgaagaagagtcgtgtgagataa
DBGET
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