Sinocyclocheilus rhinocerous: 107748388
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Entry
107748388 CDS
T04916
Name
(RefSeq) SWI/SNF complex subunit SMARCC2-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107748388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srx03021
]
107748388
03036 Chromosome and associated proteins [BR:
srx03036
]
107748388
Transcription machinery [BR:
srx03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107748388
Chromosome and associated proteins [BR:
srx03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
107748388
PBAF complex
107748388
GBAF(ncBAF) complex
107748388
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
PaaA2
Motif
Other DBs
NCBI-GeneID:
107748388
NCBI-ProteinID:
XP_016418650
LinkDB
All DBs
Position
Unknown
AA seq
1031 aa
AA seq
DB search
MAVRKKDGGPNVKYFEASDTVSQFDNVRVWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGRHVSNPPLTKLPMKCFLDFKSGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMTIEKSLVQNNCLTRPVIYLSSEIEPKLLGKLKDIIKRHQGSVTEDKLSSSHVVVP
VPTSLEDEEWVRPVMKRDKQMLLHWGYWPDSYDTWISASEVEAAVEDPPTAEKPRKVHAK
WILDLDQFNEWMNEEDYEVGEGGPRRKRISAKTLTDEVSTPDERRDKKPSSAKKRKRSPS
PSPTPPPQESKKKNTKKGPTTPYTKSKRGQREEEQEDLTKDLDEPSPVPAVEEATLPKTV
TKKDSDSTPVKGGTMTDLDEQEDESMETVGKEEEEGCPSVKGEPVKGSDLHEDNVTEQTH
HIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLT
STACRRNLAGDVCAIMRVHAFLEQWGLINYQVDSESRPTPMGPPPTSHFHVLADTPSSLV
PLQPKASQTSSSQPMLSFPDKVKDKPADLQNFGLRTDVYSKKSGPAKGPSATREWTDQET
LLLLEGLEMCKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSSSSLGPLAYQPVPF
SQAGNPVMSTVAFLASVVDPRVASAASKSALEEFSRMKEEVPAALVEAHVRRVEEAARAS
GRPDPLYGLEGSGIAGTGLEDSDKPSEDGSEENKSSDGQSSQDKRENKESKDGASEEEEK
QGENGKKEEERVREGETDRETEKTDSEMADGEKEKEQKEGSEEGQRDGESEGEKKAKVER
DVGEGNLATAAASALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELET
IMDREREALEYQRQQLLADRQSFHMEQLKYAEMRARQQHFQQIQHQHHSNQPGNQSGSTP
SVPHQPVINTSAPPPTQSPASVSATNAHNEAPPPASHSSPPTNTQTGAAHDSSTPLPGDS
LYPNAPVPPTQ
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atggcggtacggaagaaagacggcggcccgaatgtaaaatatttcgaagcgtctgatacc
gtctcgcagttcgacaatgtccgggtttggctgggcaagaattataaaaagtatattcaa
gcagagccccccaccaataaatctttgtcgagtctggtggttcagctccttcagtttcag
gaggaagtgtttggccggcatgtcagcaaccctcccctcactaaactaccgatgaagtgt
tttttggatttcaaatctggaggagctctgtgtcatattctggctgctgcctacaagttc
aagagtgatcaaggatggaggagatttgacttccagaatccttcgagaatggaccgcaat
gttgaaatgttcatgactatagaaaaatctttggtacagaataactgcttgacccgacct
gtgatttacctgagttcagagatagagcccaagctactgggaaaactgaaggacataatc
aaacgacaccagggatctgtgactgaagataagctgtccagctctcatgtagtggtgcct
gttcctactagtctggaggacgaagagtgggttcgtcctgtaatgaagagagacaaacag
atgctgctacactggggctattggcctgatagttatgacacatggatctcagccagtgag
gtggaggctgctgtggaggatccgcccactgctgagaaacccaggaaggtccatgccaag
tggattctggacctggatcagtttaatgagtggatgaatgaggaagactatgaggtggga
gaaggaggaccgaggaggaagagaatttcagcgaagactctcacagatgaagtgagcact
ccagatgaaaggagggataaaaaacccagcagtgccaaaaaaaggaagcgctccccgtct
ccatctcctacccctccaccacaggagagcaagaagaaaaacaccaagaaagggcccact
actccctacactaagtccaaacgaggacagagagaggaagaacaggaagatctgactaaa
gatttagatgaaccctcacctgtgcctgcagtggaggaagcaacactacctaaaacagtg
actaagaaggactcagattctactccagtgaaaggaggcactatgactgacctggatgag
caagaggatgaatcaatggagactgtagggaaggaggaagaagaaggttgtccgagtgtg
aaaggagaaccggtgaagggttcggaccttcatgaggataatgtcactgaacagacccat
catatcattatacctagctatgctgcttggtttgactataacagtgtccatgctatagag
cgcagagcactgcctgagtttttcaatgggaaaaacaagtcaaagacacctgaaatttac
ctggcataccgtaacttcatgattgacacgtacagactgaacccacaggagtatttgacc
tctacagcatgccgtaggaacctggctggagatgtttgtgccattatgagggtccatgca
tttctggaacagtggggcttgattaactatcaggtggattcagagagtcggcccactccc
atggggcctccacccacctcacactttcatgtgctggcagatactccatcaagtctggta
ccactacagcctaaagcatcccagacttcatcctctcagccgatgctctcattcccagac
aaagtcaaggacaaaccagccgacttgcagaactttgggttgaggacagatgtgtacagt
aagaagagcggcccagctaaaggacccagtgccactcgggaatggacagaccaggagaca
ctgctactgctggagggtctagagatgtgtaaagatgactggaataaagtatcggaacac
gtgggcagccgcacacaggatgagtgcatcctccacttcctgcgtctaccgatcgaagac
ccctacctggaggatagctcctcctccctaggcccgctggcctatcagccagttccgttc
agtcaggcggggaatcctgtcatgagcactgtggcgtttctagcctctgtggtcgaccct
cgagtggcttctgctgcatctaaatcagcacttgaggagttctctcgaatgaaggaggag
gtaccagctgcgttggtggaggctcatgtgcgtcgagtggaggaggcggccagagcaagc
gggaggccagaccctctctacggcctggagggcagcggcatcgcaggaaccggcctcgag
gattctgacaaaccctctgaggatggaagtgaggagaataagagcagtgatggtcaatct
agccaagataaaagagaaaataaggagagcaaagatggagccagtgaggaggaagaaaaa
caaggagagaacggcaagaaagaggaagagagagtgagagaaggggagacagacagagag
acagagaaaacagactcagaaatggctgatggcgagaaggagaaagaacagaaggaggga
tcagaagagggtcagagggatggagagagtgagggggagaagaaagcaaaggtggagaga
gatgtaggagagggaaacctggccaccgccgctgcttcagcactcgctgctgctgccgtg
aaagccaagcacttggcagcagtagaggaaaggaagatcaagtctctggtggctctgctg
gtagagacccagatgaagaaactggagatcaaactcagacactttgaagagttggaaacc
atcatggacagagagagagaggcacttgagtatcagaggcagcagcttcttgctgatcgt
cagtcgtttcatatggagcagttgaagtatgcagagatgagagcccgacagcaacacttc
cagcagatccaacaccagcaccatagcaaccagcctggcaatcagtctggcagtactcca
tctgtaccccaccagcctgtcattaacacctctgccccgcccccaacacaaagccccgcc
tccgtgagcgccactaatgcccacaatgaagctccaccccctgcctctcacagttctccc
cccaccaacacacagactggagcagcgcatgattccagcactccacttccaggggattct
ctctatccaaatgcccctgtgcctccaacacagtaa
DBGET
integrated database retrieval system
