Sinocyclocheilus rhinocerous: 107748533
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Entry
107748533 CDS
T04916
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1 homolog
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
107748533
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
srx04131
]
107748533
Membrane trafficking [BR:
srx04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
107748533
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
TPR_Vps41
DcpS
TPR-S
Motif
Other DBs
NCBI-GeneID:
107748533
NCBI-ProteinID:
XP_016418833
UniProt:
A0A673JNU4
LinkDB
All DBs
Position
Unknown
AA seq
867 aa
AA seq
DB search
MSVKAFELVPAVEREQVMGEKVRINIECIECCGKHLYLGTNDCFIHHFLLEEHTTAKGKL
AYNVQKLLHKYLGLKKPVAELKAASALERLIVLCDSSITVVDMVTLEPVPTGGTKLKGVT
AFCINENPVTGDAFCVEMAVVLARRRAVQICTVHEDRVQMLKEVTTPEQPCALSLDGYNI
CLALSTQYMILNYSTGTSQDLFPYDCEERKPIVKRIGREEFLLAAPGGLGMFANAEGISQ
HAPVSWSESVIAAAVCFPYVVALDEGFVTVHSMLDQQLKQTLSFRDGHLLQDFEGKVVLA
SSKAVYILVPLPLERQIQDLLASHRVEEALTLTEAAQRNIPKEKYQILHKRILQQAGFIQ
FGQLQFLEAKEHFRKGQLDVRELIALYPLLLPASSSFTRCHPPLHEFADLNHLTQGDQEK
VQRFKRFLISYLHEVRSSDSANGFHEDVDTALLKLYAETGHESLLDLLASDNACVLADSA
PWLEKHHKYFALGLLYHYNGQDSAALQMWVKIVNGDLQDSTRPDLFEYVVDFLSFCSNLD
LVWRHADWALQKDQKIGVQIFTKRFTSEEKTGQLNPDDVITYLQNHSQALLLYLEHLVLE
KRLQKEKYHTHLAVLYAERVLGLISRPSATDDQLSAARQKLQRLLKESNLYRVQLLLGKI
QDSELLLLERATLHGKSEEHDKALHILVHQLKDSAAAEEYCSWASATHDQFYRQNLFHQL
LSVYLDPDVPGGAQTVAAVDLLNRNADVFDAVRVLKLLPEEWSLPLLRPFLCGALRASVH
ARCTSQVAVGLARAQNLQLQHDRLKYRGGPILVSEKKGCQLCHNTFSEPDCACLPGGTPV
HIHCVAKKTLNLPVERQHENAHRSNHT
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgaaagcttttgagctggttcccgccgtggagcgggagcaagtgatgggtgaa
aaggtgcggataaacatcgaatgcatagagtgctgcggcaaacacctgtaccttggcacc
aatgactgcttcatccatcacttcctactagaggagcacactacagccaaaggtaagctg
gcctataatgtccagaagctcctccacaaatacctgggcctgaaaaagccagtggcagag
ctgaaggctgcctctgcgttggagcgtctaattgtcctctgtgactcaagcatcactgtt
gtggacatggttactctggagcctgtacccactggcggcacaaagctcaaaggtgtgact
gcgttttgtatcaacgagaatccagtgacgggggacgcgttctgtgtggaaatggcagtg
gttttggcacgcagacgggccgtccagatctgtacggtccatgaggacagagtgcagatg
ttaaaggaagtgaccacaccagagcagccctgtgccctgagcctggacggatacaatatc
tgtctagccctgtccacgcagtatatgattctcaactacagcacaggaacctctcaggac
ctgttcccttatgactgtgaagaaaggaaacccattgtgaagaggattggccgggaagag
tttctcctggctgctccaggcgggcttgggatgtttgctaacgcggagggcatatctcag
catgctccggtgagctggtcagagagcgtgattgcggcggctgtgtgtttcccgtatgtg
gtcgctctggatgaaggctttgtgacagttcacagcatgttggaccagcagctcaaacag
acgctgtcgttcagagatggacaccttttacaggattttgaaggtaaggtggtgttggcc
tcttcaaaagcggtgtatatactggttcctctccctctggagcgtcagatccaagacctg
ttggcaagccatcgagtcgaagaggccctgaccctcaccgaggcggcacagagaaacatt
cccaaagaaaaatatcagatattgcacaaaagaattctccaacaagcaggattcatccaa
tttggccagcttcagtttttagaagcaaaagagcattttaggaaaggacagctggatgta
cgggagctgatcgctctttatccgctgctccttcccgcctcttcctctttcacgcgttgc
catccaccacttcatgaatttgctgacttgaaccacctgacgcaaggagaccaggagaag
gtacagcgcttcaaacgtttcctcattagctacctgcacgaggtgcgtagcagcgacagt
gctaatggtttccatgaagatgtagatactgcattgctgaagctctatgcagagaccggc
cacgagagtctccttgacttgctggcctccgataatgcctgtgtcctggcagacagcgcc
ccctggctggagaagcatcacaagtattttgctcttgggcttctgtatcactacaacggt
caagattctgctgctttacagatgtgggtaaagattgtcaatggcgatctccaggactca
acgcgaccagatctgtttgaatatgttgtggattttcttagtttttgctccaaccttgat
cttgtgtggcggcatgcagactgggcactacagaaggatcaaaagattggtgtgcagatc
ttcaccaaacggtttacgtcagaggagaagacgggccagttaaacccagatgacgtgatc
acgtatttgcagaatcacagtcaagcccttctgctctacctggaacaccttgttctagag
aagagactgcagaaagagaagtatcacacacatctagctgtgctgtatgcagaaagagtg
ctgggcctgatctcacgaccatcagccactgatgaccagctgtctgctgcccgccagaaa
ctacaacgtttactgaaagagtctaatctgtacagggtccagttactactaggtaaaatt
caggactccgagctgctgctgcttgagcgagctacactacatgggaagtcagaggaacat
gacaaggccttgcacattctagtgcaccagctcaaagactcggctgcagctgaggaatac
tgctcttgggcctctgcgactcatgaccagttctaccgtcagaaccttttccaccaactc
ttgagtgtttacttggaccccgatgtaccaggaggggcacaaacagtagctgccgttgac
ttgcttaaccggaacgctgacgtttttgatgcagtgcgtgtgttaaagctcctcccagag
gagtggtctctaccgttactccgtcctttcctgtgcggggcgctgagggccagtgtgcat
gcacggtgcacttcccaggttgctgtggggctggccagagcacaaaatctccagcttcag
catgacaggctgaagtatcgaggcggcccaatattagtgtctgaaaagaaaggatgccag
ctgtgccacaatacctttagcgagccagactgcgcctgcttgcccggcggaacgcctgtc
cacattcactgtgtcgccaagaaaaccctgaacttaccagtagagcggcaacacgaaaac
gcccaccgcagcaaccacacatga
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