Sinocyclocheilus rhinocerous: 107748646
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Entry
107748646 CDS
T04916
Name
(RefSeq) SWI/SNF complex subunit SMARCC1-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107748646
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srx03021
]
107748646
03036 Chromosome and associated proteins [BR:
srx03036
]
107748646
Transcription machinery [BR:
srx03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107748646
Chromosome and associated proteins [BR:
srx03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
107748646
PBAF complex
107748646
GBAF(ncBAF) complex
107748646
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM
SWIRM-assoc_1
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
DUF919
Motif
Other DBs
NCBI-GeneID:
107748646
NCBI-ProteinID:
XP_016419023
UniProt:
A0A673L9M6
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MATQALGSAAGFTTSQAGCSSSLSRRMDGGPCCKFWESPEIISQLETVRSWIGKHYKKYV
QTDAPSSKSLSGLVIQLLQFQETSFGRRANNPNFTKLPAKCFQDLRPGGALCHILGSVYK
FKTEQGWRRFDLQNPSRMDRNVEMFISVEKTLTQNNLLSRPVVYLSPDLEQKQALKLKDI
VVRHQGTVTEEKSQASHQIYPSPSTADEEEWLRPVMRLDRQVMVHWGMCPDSYDSLISAS
DVDGEVEEPPNPDRCWKVNAKWVLDTDTYNEWMNEEDYEIDENGNSMSFRRHIYQSTEEQ
KPGKKRRRSPSPPSSESKKKGGKKSSGVYKRRGQPEEVEPEEDLTKDMEDPTPVPNMEEV
ILPKNVNLKKDSENTPVKGGIMADLDDQEEDLLSGVRDEEEQREFGRGMEGEESATEQTH
HIIVPTYASWFDYNCIHQIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLT
STSCRRNLTGDVCALTRVHSFLEQWGLINYQVDAESRPLPMGPPPTPHFNVLTDTPSGLV
PLQHRPLQVSASQHMLHFPEKSREKPSDLQNFGLRTDIYAKKHPKSKGASAGREWTEQET
LLLLEALEMYKDDWNKVSEHVGSRTQDDCILHFLRLPIEDPYLENSEASMGPLAYQPVPF
SQSGNPVMSTVAFLASVVDPRVASAAAKAALEEFSRAREEAPPEIFSASFHKIQQLGHNL
DPAFTLQTDSIVGLDPDHSEKTDGSGIEMMNTEYEQHEKLEGDSILGEGECVKNEEKEES
EGERGEESTAEESFDMGLTQGDGEGMKRRVALEVVEGNFATAAAAALASAATKAKHLAAV
EERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLSERQNFHLEQV
KYAEMKAQQNVEQQQQTGATQSSSSTAYNPLHHGRSVGSAGTGQVMGARHSGAPNGMYQT
PPSSQADGAAPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggctacacaagcgctaggctctgctgctggatttacgacgagtcaagccggttgtagc
tcttcattgagccgaaggatggacggtgggccgtgctgtaaattctgggaaagcccggaa
ataatctctcagttggagacagttcgcagttggattggaaagcattataaaaagtatgta
cagactgatgctccctccagcaagtctctgtctgggctggtcatccaactgctgcagttt
caggaaacttcatttggccgtcgagcaaataacccaaactttacaaaactcccagcaaag
tgttttcaggacctaaggccaggcggtgctctctgccatattctgggatcagtgtacaag
ttcaagacagaacaaggatggagacgctttgatcttcagaacccatccagaatggatcgc
aatgtggagatgttcatatctgtggagaaaactctgacacagaataacttattaagcaga
cctgtggtgtacctgtctcctgatcttgagcagaagcaagctcttaaactcaaagacatt
gttgtgcgacaccagggcacagtgacagaggagaagtcacaagcctcccaccaaatatac
ccatccccctccacagcagatgaagaagagtggcttagaccagtcatgcgattggatcgg
caagtgatggtgcattggggcatgtgtccagacagttatgactcgcttatatcagcaagt
gatgtagatggagaagtagaggaacctcccaacccagacaggtgctggaaggttaatgct
aaatgggttcttgacacagacacatataatgagtggatgaatgaggaagattatgagatt
gacgagaatgggaatagtatgagtttcaggcggcatatctaccaaagcacagaggaacag
aaacctggaaagaagcggcgacgctccccgtctccaccttcttctgagtctaagaagaaa
ggaggaaagaaaagctcaggtgtgtataagaggcgtggtcaaccagaggaagtggagcca
gaggaggacctcactaaagacatggaagatcccacacctgtccctaacatggaggaggta
attttgcctaaaaatgtgaacctgaaaaaagacagtgaaaacactccagtcaaaggaggc
attatggctgatttagatgaccaggaagaagacctgctttctggtgtcagagatgaggag
gagcagagggagttcggccgtgggatggagggggaggagagtgccacagagcaaacgcat
cacatcattgtgcccacctatgcctcctggttcgactacaactgtattcatcagatagag
agacgagctctgcctgagttcttcaatgggaaaaataagtccaaaacaccagaaatatat
cttgcataccgcaacttcatgattgatacataccggctaaaccctcaggagtatttgacc
tcaacctcctgtagacgaaacctgacaggagatgtgtgtgcgcttacaagggttcattcc
tttttggagcagtgggggttgatcaactaccaggttgatgcagaaagtcgacccctcccc
atgggcccgcccccaacaccacactttaatgttcttacagacacaccgtctggactcgtc
ccactacagcacagacccttacaggtttccgcttctcagcatatgttgcatttcccagaa
aaatcgagagaaaaaccgtctgacctgcagaactttggtctgcggactgatatttatgct
aagaaacatccaaagagtaaaggcgcaagtgcagggagagaatggacagaacaggaaaca
ctcttacttttggaggctttggagatgtataaagatgactggaataaggtgtccgagcat
gtgggcagtcgcacacaggacgactgtattcttcacttcttacggttgcccatagaggac
ccatacctagaaaactctgaagcctcaatgggtcctctggcctatcagcctgtccctttc
agccagtcagggaaccctgtaatgagcactgttgcttttcttgcatctgtggttgaccct
cgagtggcctctgcagccgccaaggcagctttagaggaattctcaagagcaagagaagag
gccccaccagagatattcagtgccagctttcacaaaatacagcaactcgggcataattta
gatccggcctttacactccaaacggacagcattgtgggacttgatcctgatcattcagaa
aagactgatggaagtggtatagaaatgatgaacactgaatatgagcagcatgaaaagctt
gagggtgacagcatcttgggagagggagagtgtgtgaagaacgaggagaaagaagagagt
gaaggagagaggggagaggagagcacagcagaggagagttttgacatgggcctcacccaa
ggggatggggaggggatgaagagaagggtggcgcttgaggtggtggagggaaacttcgcc
acagctgctgctgcagcactggcctccgcagctaccaaagcaaagcacttggctgcagta
gaagagaggaaaatcaaatctctggtggctctgctggttgagactcagatgaaaaagttg
gagatcaaactgagacactttgaagagctggagaccattatggatcgagaaaaagaggct
ctggagcagcagagacagcagttattgtcggagaggcagaacttccacctggagcaggtg
aaatatgccgagatgaaggcacagcagaacgtggaacagcagcaacaaacaggagctaca
cagagcagcagtagtacagcatacaaccctcttcaccacggtcgttcggtgggcagtgct
ggtactggacaggtcatgggtgctcggcactctggagctcccaatggcatgtaccaaact
ccaccgtcctcacaggccgatggggccgcacccatgtaa
DBGET
integrated database retrieval system
