Sinocyclocheilus rhinocerous: 107748797
Help
Entry
107748797 CDS
T04916
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04120
Ubiquitin mediated proteolysis
srx04137
Mitophagy - animal
srx04144
Endocytosis
srx04340
Hedgehog signaling pathway
srx04350
TGF-beta signaling pathway
srx04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107748797
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
107748797
04350 TGF-beta signaling pathway
107748797
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107748797
04137 Mitophagy - animal
107748797
09144 Cellular community - eukaryotes
04520 Adherens junction
107748797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
srx04131
]
107748797
04121 Ubiquitin system [BR:
srx04121
]
107748797
03029 Mitochondrial biogenesis [BR:
srx03029
]
107748797
Enzymes [BR:
srx01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
107748797
Membrane trafficking [BR:
srx04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
107748797
Autophagy
Mitophagy
Other mitophagy associated proteins
107748797
Ubiquitin system [BR:
srx04121
]
Ubiquitin ligases (E3)
HECT type E3
107748797
Mitochondrial biogenesis [BR:
srx03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
107748797
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
107748797
NCBI-ProteinID:
XP_016419241
LinkDB
All DBs
Position
Unknown
AA seq
766 aa
AA seq
DB search
MSNQGVRRNGPVKLRLTVLCAKNLVKKDFFRLPDPFAKVVVDGSGQCHSTDTVRNTLDPK
WNQHYDLYIGKSDSITISVWNHKKIHKKQGAGFLGCVRLLSNSINRLKDTGCKYQRLDLN
KLGPNDSDTVRGQIVVSLQSRDRIGTGGPVVDCSRLFDNDLPDGWEERRTASGRIQYLNH
ITRSTQWERPTRPASEYSSPGRPLSCLVDENTPIMTPNGAAGVPADDPRVQERRVRSQRH
RNYMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNVNCEELGP
LPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHLVLNPSPNGSRGAVEAQSSRPGQ
LKEQAQSVMSPGNLPEDPECLTVPKYKRDLVQKLKILRQELSQQQPQAGHCRIEVSREEI
FEESYRQVMKMRPKDLWKRLMVKFRGEEGLDYGGVAREWLYLLSHEMLNPYYGLFQYSRD
DIYTLQINPDSAVNPEHLSYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQLLGKPITLDDM
ESVDPDLHNSLVWILDNDITGVLDHTFCVEHNAYGEIIQHELKPNGKSIPVTQDTKKEYV
RLYVNWRFLRGIEAQFLALQKGFNEVIPQHLLKAFDEKELELIVCGLGKIDINDWKSNTR
LKHCTPDSNIVKWFWRAVESYDEERRARLLQFVTGSSRVPLQGFKALQGAAGPRLFTIHQ
IDASTNNLPKAHTCFNRIDIPPYEGYDKLYDKLLTAIEETCGFAVE
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatcaaggagttagaagaaatggacccgttaagttgcgtttaacagttctgtgc
gcaaagaacctggtgaagaaagacttcttccgactgccagatcccttcgctaaggtggtg
gtggacggttcagggcagtgccactcgacagacacagtgaggaacacgctggaccccaaa
tggaaccagcactatgacctgtatatcgggaagtcggactccatcactatcagtgtgtgg
aaccataaaaagatccataagaaacagggagcgggattcctgggatgtgtacggctcctc
tccaactccattaaccgactcaaggacacaggctgtaagtatcagcgtttggacctgaac
aagttggggcccaatgacagcgataccgtgaggggacagatagtagttagtcttcagtcc
agggacaggataggcaccggagggccagtcgtggactgcagtcgtctgtttgacaacgac
ctgcctgatggctgggaggagaggagaactgcatctggtcggatccagtatctgaatcat
atcacacgcagcacccaatgggagagacctaccaggcctgcgtctgagtactcgagcccc
ggccggccgctcagctgcctggtggatgagaacacgcccatcatgacgcccaacggggca
gcgggcgtacctgcggatgatccccgggtgcaggagcggagggttcgctctcagagacac
agaaactacatgagcaggactcacctacacacaccgcccgacctgcctgagggatacgag
caaaggaccacgcagcagggtcaggtgtacttcctgcacacgcagacgggcgtcagcaca
tggcacgaccccagagtgcccagggatctcagtaatgtgaattgtgaggagctgggccca
ttgcctccaggctgggagataagaaacacagccaccggacgagtgtactttgtggaccac
aacaaccggaccacacaattcacagacccgcgtctctccgctaacctgcacctcgtctta
aatcccagtccgaatggctcccgtggtgccgttgaggctcagagcagtcgtcccggacag
ctgaaggagcaggctcagtctgtcatgtctcccggaaatctccccgaggaccctgaatgt
ctcacggtgcccaagtacaagcgagatctggtgcagaaactgaaaatcctgcgacaggag
ctgtcccagcagcagccgcaggcaggacactgccgtatcgaggtctcgcgtgaggagatc
tttgaggaatcataccggcaggtgatgaagatgaggccgaaggacctgtggaagaggttg
atggtcaagttcagaggagaggaaggtctcgactatggtggagtcgctagggagtggttg
tacttgctgtcgcatgagatgttaaatccatactacggactgttccagtattcacgagat
gacatctacacgctacagatcaacccggactctgccgtcaatccggagcatttgtcttat
ttccactttgtggggaggattatgggaatggctgttttccacgggcactacatagacgga
ggcttcactctgcccttctacaagcagttgctggggaaacccatcactctggacgacatg
gagtcagtggatccagatctccacaacagccttgtctggatcctagataatgacatcact
ggggtgttggaccacacgttctgtgtcgaacacaatgcatacggagagatcattcaacac
gagctcaaacccaacggcaagagcatccctgtcacccaggacaccaagaaggagtatgtg
aggctgtatgtgaactggcggttcctgaggggcatcgaggctcagttcctggccctgcag
aaaggctttaatgaggtcatcccacagcacctactcaaggcgtttgatgagaaagagttg
gagcttattgtgtgtggactcgggaagatcgacatcaacgactggaagtcaaacacccgt
ctgaagcactgcacgcctgacagtaacatcgtgaagtggttctggcgggccgtagagtcg
tatgatgaggagaggagagccagactgctgcagtttgtcaccggctcctccagagtccca
ctgcaaggattcaaagccctgcaaggtgctgctggaccacgtctcttcaccatccatcag
atcgacgccagcaccaacaatctgcccaaagcacacacttgcttcaaccgtatcgacatt
cctccgtacgagggctacgacaaactctatgacaagctgctgacggccatcgaggagacc
tgcggcttcgctgtggaatga
DBGET
integrated database retrieval system
