Sinocyclocheilus rhinocerous: 107749001
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Entry
107749001 CDS
T04916
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx02010
ABC transporters
srx04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
107749001
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
107749001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srx02000
]
107749001
Transporters [BR:
srx02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
107749001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC2_membrane_3
ABC_tran
R1_ABCA1
AAA_21
KLRAQ
AAA_23
AAA_15
Motif
Other DBs
NCBI-GeneID:
107749001
NCBI-ProteinID:
XP_016419525
LinkDB
All DBs
Position
Unknown
AA seq
1965 aa
AA seq
DB search
MLCNIQNPCVSSPTPGEAPGQVNNFDNSTVTKVLVEVQSLLADPALFSSVKLISEDIGRW
TSVLENANPAAGESIPLHSLLRTNETFSEYLTNSLLVPNTTAASLMRARVRLGQLPALSA
DGDLRSVLCGPSADRILDFNSANQKEEFQNITCSLTANQLLQARRVFMQNLDNIKLLNAT
FISRSHPEALRVHWSSAEAEALMFSRLKEEKPIGSMSNFRSSVLLSAVETLDFRSDPFGS
LTQLMCGTDFNSTSRATVRRASTESDQQNTRTATADNTNTTSTNTSEFCKNLTDSLESTS
SLRLLWRTFRPFLLGKILYAPDTNVTRSIVTEVHVQTQTQRDANAVHLNKKSTDSHCALL
KNPVFAVVLDERLDDSGLSSALISGFLFNGPEAERPAGMPAFDWRNVFNATSSAAQQITQ
ILACFDLDKFEGVSTEAVLVEQSLKLLNQDRFWAGLVFTDLDPTDPRTPPHIRYKIRMDI
EETERTDKIKERSWSPLARDNPFNDLHYVRGGFVYLQDMVDRGIITVQTGVSQSLGVYAQ
QMPYPCYVDDAFVSSIGTILPMFLVLAFIYTACQTIKGLVLEKELRLKEVLRVVGVRNSS
MWFCWFIENMVLLTIPCALISVMVKYGKVLRYSDPSVIFVFLLVFCMATVMQCFFISVFF
SRANLAAACGGLIYFLLYLPHVLCYTWRDVMGFGAKIATSLLSCVAFGYGCENLSRYEEQ
GIGIQWSNIRVSPQENDRYSFIVSIFMMLFDAFIYWVLTWYIENVYPGQYGIPKPWYFPF
TSSYWCGTPVGSDAQPDLLQELENQSGFLEKPPPGMKPGVCIRNLVKVYKTGNKLAVDGL
SLDFYQDHITSFLGHNGAGKTTTMSILTGLFAPTSGTAYVNGYDIRSDMDTIRTHLGMCP
QHNVLFNDLTVEEHIYFYARLKGRSSKEVKKEIDQMIRDVGLPHKRKDLVKNLSGGMQRK
LSVAIAFVGGSNVVILDEPTAGVDPYARRGIWELLLKYKTGRTIILSTHHMDEADILGDR
IAIISHGRVCCCGSSLFLKKTYGRGYYLTIARANQERVMAQRAPAIKECDKFSVDEGICS
DSISSLDPPDVADLSRLVRRHVPEAEFLEVVGQELVYVLPYTGATNGSFASLFKELDLEK
STLGITSYGISDTSLEEIFLKVAEDTGVDVESHDKKETLKQKRRSSSRISGIQTISSALE
GKDANAVKNGALKHAKVRFTSRVEDTQRPMCVNGKGSYVIMGWSLIKQQFLALFIKRFHH
ARRSRRGIIAQVKPSDTSNTPFDDPAVDQVERVTNALLSSPGFGTRCMSTNPIPKLPCNM
AGGTIWLTPAVDPSITEIFEKGNWSMENPSPDCQCSTPQRSFMLPDCPLGAGGLPPPQVR
HTTDTLQNLTARNVTDFLLKNYQKSGKIRYGGISVGGVNSQVKLNESDITAVIDDLKSFL
NISQFNQTEHIFQAIRLLLVELGTRDNVKVWFYNQGWHSLVSFLNVASNGVLRGNLPAAR
RAQEFGITTFNHPLNLTKEQLSFTAMATTSTDVVVSICVIFAMSFIPASFVLFLIQERVS
KAKHLQFVSGVNPTVYWLANFAWDMCNYIVPCIIVIIIFLCFQQKSYVSPPNLPALILLL
LLYGWSITPMMYPASFLFSVPSTAYVVLTCINLFIGINGSVATFVMELFDDPVSLQQTHT
HTSIKSLPTSSGEEDEDVARERERVQRGGAQNDLLRICDLTKMYRMKKTPAVEKICVGVP
AAECFGLLGINGAGKTTTFKMLTGDISPTAGDAFLNGYRAQNQVLKKAVVDEQTASCSLK
DEPTTGMDPKARRFLWDCILSVIKEGRSVILTSHRLRIQFSPVKICMCVCCRFGDGYTLI
IRVCADQADLCTVETFVRDTFPGSTLKEKHHNTLQYQVPQGEGALAHIFSQLSKHQQLLH
VEDYSVSQTTLDQVFVSFARQQRDEENGAFENDVDLNDEIQTSAT
NT seq
5898 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgtaacatacagaacccgtgtgtgagctcccccacaccgggcgaagcacctgga
caggtgaacaacttcgacaactccacagtcactaaggttttggttgaagtgcagtcgctc
ctggcggatcccgctctcttcagcagcgtcaaactgatctctgaggatatcggccgatgg
acgtctgtcctggagaatgcaaacccagccgcaggtgagtcgattccgcttcacagtttg
ctgagaaccaacgagacgttttctgaatatctgacgaacagccttttggtgccaaacaca
actgccgcgagcctgatgagggccagagtccggctcggtcagctgcctgcgctgtcggct
gatggagatctgcgctcggtgctctgcggcccgtcggccgatcgcatcctggactttaat
tcagccaatcagaaagaggagtttcagaacatcacatgctccctgacagccaatcagctt
cttcaggccagacgagtcttcatgcagaatctggacaacatcaaactcctgaacgcaaca
tttatcagccgctctcatcctgaagcgcttcgggttcactggagttctgctgaagctgaa
gcattaatgttctccagactgaaggaagaaaaacccattggcagcatgtctaactttagg
tcttcagtgctgctgagtgcagtagaaacgttggacttcaggtcggatccgttcgggagc
ctcactcagctgatgtgtggaacagactttaactcgacgagcagagctactgtgagaaga
gcgtcgacagaatcagaccaacaaaacacacgcaccgcaacagccgacaacaccaacaca
accagcaccaacaccagtgagttctgtaaaaacctgacggactcgctggagagcacttcc
agcctgcgtctgctctggaggaccttccggccgttcctgctgggaaagatcctctacgct
cccgacactaatgttacacgcagcatcgtcacagaggtacacgtgcaaacacagacacag
agggacgctaatgcagtgcatctgaataagaagagcacagactctcattgcgctcttctg
aagaaccctgtgtttgcagtcgttctggacgagcggctggatgactccggtctgtcctca
gcgctcatcagcggcttcctgtttaacggccctgaggcggagcgtccggcggggatgcca
gccttcgactggcgtaacgtcttcaacgccaccagcagcgcagcgcagcagatcactcag
atcctcgcgtgttttgatctggataagtttgaaggcgtcagcactgaggctgtgctggtt
gagcagtctttgaagctcctgaatcaggaccgcttctgggccggtctggtcttcacggat
ctggaccccactgacccgcggaccccgccacacatcagatacaagatccgcatggacatc
gaggagaccgagagaacggacaagatcaaggagaggtcctggtccccgttggcccgtgat
aacccgtttaatgacctgcactacgtgagaggaggcttcgtgtacctgcaggacatggtg
gatcgaggaatcattacagtgcagacgggagtcagtcagtcgctcggcgtctacgcacag
cagatgccgtacccgtgttacgtggacgacgccttcgtttcgtccattggcaccatactg
cccatgttcctggtgctggcgttcatctacacggcctgccagaccatcaaaggcctggtt
ctggagaaggagctccgtctgaaggaggttctgcgggttgtcggggttcggaactcttcc
atgtggttctgctggtttatagagaacatggttctgctgaccattccctgtgctttgatc
tcggtcatggtgaagtatggaaaggttctgcgatacagcgacccgtctgtgatctttgtc
ttcctcctggtcttctgcatggccactgtcatgcagtgctttttcatcagtgtgtttttc
tctcgggcgaatctggcagccgcctgtgggggcctcatctacttcctgctctacctgcct
catgtgctttgctatacctggagggacgtcatgggcttcggcgccaagatcgccacgagc
ctgctgtcgtgtgtggcgttcggatacggctgtgagaatttatcccgttatgaagagcag
ggcatcggcattcagtggagcaacatccgggtcagtccgcaggagaacgaccgctactcc
ttcatcgtctccatcttcatgatgctgttcgacgcgttcatttactgggttctcacctgg
tacatcgagaacgtctatccgggtcagtatggcatcccgaagccctggtattttcccttc
acgtcctcgtactggtgtgggactccagtgggatctgatgcccaacccgacctgcttcaa
gagctggagaatcagagcggtttcctggaaaagcctccgcctggaatgaagcctggagtt
tgtatcagaaacctggtgaaggtctataagacgggaaataaactggccgtggacggactc
agtctggacttctatcaggatcacatcacctcgtttttaggacacaacggagccggaaaa
accaccaccatgtcgatactgacgggtcttttcgctcccacctcgggtacggcttacgtt
aacggctacgacatccgcagcgacatggacaccatcaggactcacctgggaatgtgtcca
caacacaacgtcctcttcaacgacctgacagtggaagagcacatttatttctacgctcgt
ctgaagggtcggagctctaaagaggtgaagaaggagatcgatcagatgattcgagacgtg
ggtttgcctcacaaacgcaaagacctcgtcaagaacctctcaggtgggatgcagaggaag
ctgtcggtcgccatcgcgttcgtgggaggatccaatgttgtgattctggacgagccgaca
gcgggagtcgatccgtatgcacgcagaggcatctgggagctgctgctcaaatacaaaaca
ggtcgtaccatcatcctgtcgacgcatcacatggatgaagcagatattctgggcgatcgt
atcgccatcatctcgcacggccgcgtctgctgctgcggctcctcgctcttcctcaagaag
acgtacggtagaggctattacctgacgatcgcgcgggccaatcaggagcgagtcatggca
caacgagccccagcgattaaagagtgtgataaattcagcgtggatgaaggaatctgcagt
gacagcatcagcagtctggatccgccagacgtggcagatctgagtcgactggtgcggcgg
cacgtgccggaggccgagtttctggaggtcgtaggtcaagagctggtgtacgtgctgccg
tatacaggcgccacaaacggcagcttcgcgtccctctttaaagagctggatctggagaag
agcactctgggcatcaccagctacgggatatcagacacgagcctggaggagatttttctg
aaggtggctgaagacacgggtgttgacgtggagtcccatgataagaaagaaactcttaaa
caaaagcgcagaagcagctcaaggatatcaggaatacagactatcagctcagcactggaa
ggcaaagatgcaaacgctgtgaaaaatggtgcgctcaaacatgcaaaggttagattcact
agtcgcgtggaggacacccagcggcccatgtgtgtgaatggcaaagggtcgtacgtcatc
atgggttggtcactgatcaaacagcagtttttagctctttttatcaaacgtttccaccat
gcccgcagaagtcggaggggaatcatcgctcaggtaaaaccatcagacacatcaaatacc
ccttttgatgatcctgctgtagatcaggtggagagagtgacgaatgctctgctcagttca
ccaggatttgggacgcgctgcatgagcaccaaccccatacctaaattaccatgtaacatg
gcgggaggcacgatttggttaactccggcggtggatccatctatcactgagatctttgag
aaggggaactggagtatggagaacccgtcgccagactgccagtgcagcacaccgcagcgc
agcttcatgctccccgactgcccgctcggagccggcggtttaccgccaccgcaggtcaga
cacacaacagacaccctgcagaacctcacggcccgaaacgtgaccgacttcctgctcaag
aactaccagaaatcaggaaagatacggtacggcgggatctcggtaggcggcgtgaactcg
caggtcaaactcaatgaatctgacattacagcagtgatcgacgacctcaaatcattcctt
aacatctcgcagtttaatcagactgagcacattttccaggccattcggttgttactggtg
gagttgggcaccagagacaacgtgaaggtgtggttctataatcagggttggcattcgctc
gtgtcgttcctgaatgtggccagtaacggcgttctgagaggaaatctgccagcagcacga
cgagcgcaagagttcggcatcaccacattcaaccacccgctgaacctcaccaaagaacag
ctctcatttacagcgatggcgacgacctctacggatgtggtggtgtcgatctgcgtgatc
ttcgccatgtccttcatcccggccagcttcgtcctcttcctcatccaggagcgcgtcagt
aaagccaagcacctgcagtttgtgagcggcgtcaaccccaccgtctactggctggccaac
ttcgcctgggacatgtgtaattatattgtcccgtgcatcatcgtcatcatcatcttcctg
tgtttccaacaaaaatcatacgtctctccaccaaacctgcctgccctcatcctgctgctg
ttgctctacgggtggtccatcactccaatgatgtatcccgcctccttcctgttcagtgtt
cccagcacagcgtatgtggttctgacctgcatcaacctcttcatcggcatcaacggcagc
gtggccacgtttgtcatggagctctttgacgaccctgtgagcctccagcaaacacacaca
cacacgtcgataaagtctctaccgacatcttcaggcgaagaggacgaagacgttgctcgt
gagcgtgaacgtgtgcagaggggcggagctcagaacgacctgctccgaatctgtgacctc
actaagatgtaccgtatgaagaagactccagccgtggagaaaatctgtgtgggtgttcct
gctgcagagtgctttggtttgctggggatcaatggtgcaggtaaaactacgacttttaaa
atgctgacgggagacatcagcccgacggccggagacgctttcctgaacggatacagagct
cagaatcaggtgctgaagaaggccgtggtggacgagcagaccgcctcctgctccctgaag
gacgagcccaccaccggtatggaccccaaggcccggcgttttctgtgggactgtatcctc
agcgtcattaaagagggcagatctgttatactcacctcacacagattgagaatacagttt
tcgcccgtgaaaatctgtatgtgtgtgtgttgcaggttcggggacggatacacactgatc
atacgtgtgtgtgccgatcaggccgacctgtgcacagtggagacttttgtgcgtgacaca
tttcccggcagcactttgaaagagaaacatcacaacactctgcagtaccaggtcccgcag
ggagagggagccctcgcacacatcttcagccaactcagcaaacaccagcagctgctgcat
gtggaggattactctgtgtctcagaccacactagaccaggtttttgtgagtttcgcgcgg
cagcagcgtgatgaagagaacggagcgtttgagaacgacgtggatctgaatgatgaaata
caaacatcagcgacatga
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integrated database retrieval system
