Sinocyclocheilus rhinocerous: 107749362
Help
Entry
107749362 CDS
T04916
Name
(RefSeq) DNA mismatch repair protein Msh2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
107749362
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srx03400
]
107749362
DNA repair and recombination proteins [BR:
srx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
107749362
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
AAA_27
T3SS_needle_reg
Motif
Other DBs
NCBI-GeneID:
107749362
NCBI-ProteinID:
XP_016419972
UniProt:
A0A673M5E8
LinkDB
All DBs
Position
Unknown
AA seq
936 aa
AA seq
DB search
MAVQPKQNLSMDSASEHGFLNFYFSMPEKPDTTVRVFDRNDYYTVHGKDAVFAAKEVFKT
NGVIKNLGTGNKRLESVVLSKMNFESFVRDLLLVRQYRVELYKNASKSSKEHDWQISYKA
SPGNLTQFEEILFGSGGGPGEGAAGVVGVRLGTGADGQRVVGVGYVDSTLRKLGVCEFPD
NDQFSNLEALLVQIGPKECVLPGGDAGGDLGKLRQVVQRGGVLLTDRKKSEFTTKYIVQD
LNRLLKARKGETVSSAALPEMEKQIAISCLQAVIKYLELLSDEANFGSFKITTFDLNQYM
RLDNAAVQALNLFQGSSDDATGTHSLAGLLNKCRTPQGQRLVNQWIKQPLVDKNKIEERL
DLVETFVEDSELRKSCQEDLLRRFPDLNRMAKKFQRQSSNLQDCYRVYQAVGQLPSLVLA
LERYCGKHQVLLHAAFISPLNDLVSDFSKYQEMIETTLDMNQVEHHEFLVKPLFDPTLSE
LRENMDRLEKAMQAALNSAARELGLEAAKTVKLESNAQIGYFFRVTCKEEKSLRNNKKFT
TLDVQKNGVRFTNSKLSSLNEEYTKSREEYEEAQNAIVKEIISIAAGYVDPVQTLNEVIA
QLDAVVSFAVVSHAAPVPYVRPKILEKGSGRLIVKAARHPCVEAQDDVAFIPNDVTFRRG
EEMFHIITGPNMGGKSTYIRQVGVIVLMAQIGCFVPCDEAELSVVDCVLARVGAGDSQIK
GVSTFMAEMLETAAILRSATEDSLIIIDELGRGTSTYDGFGLAWAISEYIATRLKSFCLF
ATHFHELTTLAQQVSTVRNLHVTALTTDSTLTMLYKVKKGVCDQSFGIHVAELANFPKHV
IANAREKALELEEFQDISRAVEEAGPEAKKRCLEKHEGERIIEAFLAKVKSMPVEGMSDE
AVKEELRKLKAEVIGQNNSFVNEIVTRSAKVKLTSA
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcaacctaaacaaaatctgtccatggacagtgcgtctgaacatggatttctg
aatttttatttttccatgcccgagaaaccggacaccaccgtgagagtatttgatcgaaac
gattactatacggtgcacggaaaagatgcggtttttgcagccaaggaggttttcaagacg
aatggagtcatcaaaaatctgggcacaggcaataagaggttggagagtgtggtcctcagt
aagatgaactttgagtcatttgtgagggacctgctgctggtcaggcagtaccgggtggag
ttatacaaaaatgccagtaagagcagcaaagaacatgactggcagatatcttacaaggcg
tctccaggaaacctgacccagtttgaggagattttgtttggcagtggaggaggtcctggg
gagggagctgccggtgttgtcggggttcgtcttggcaccggggccgatggacagcgtgtc
gtcggtgttggctatgtggacagcaccctcaggaaactcggtgtgtgtgaattcccagac
aacgatcagttttccaatctggaggctcttcttgtgcagatcgggcccaaagagtgtgtg
ctccctggaggagatgcaggtggagaccttgggaaactcagacaggtggtgcagcgtggt
ggcgttctgctcacagacaggaagaaatcagagttcacaaccaaatacattgtgcaggat
ctgaatcggctcctgaaggcccgtaagggagagactgtgtccagtgctgcacttccagag
atggagaaacagattgcaatatcttgcttacaagccgtcatcaaatacctggagcttctc
tcagatgaggccaattttggttccttcaagataaccacctttgacctcaaccagtacatg
cgtctggataatgctgctgtgcaggctctgaatctcttccaggggtcttctgatgatgct
acaggcactcactctctggcaggccttttaaacaaatgtcgtaccccacaaggacagcgg
ttggtcaaccagtggatcaaacagcctctcgttgacaaaaacaagatagaagaaagactg
gatcttgtggagacttttgtggaagactctgagctgaggaagagttgtcaagaggatctt
ctccgccgttttccagacctgaaccgaatggcaaagaagttccagcgtcagagctctaat
ttacaagactgttaccgagtctatcaggctgtggggcaactgccgagtctggtgctggcc
ttggagagatactgtgggaaacatcaggtcctcctgcacgcagcattcatctctcccctc
aacgaccttgtctctgacttctccaaatatcaggagatgattgaaaccacactggacatg
aaccaggttgagcatcatgagttcctggtgaaacccttatttgatcccaccttgagtgag
ctcagggagaacatggatcgtttggagaaagccatgcaggcggccctgaacagtgcggct
cgtgaacttgggctggaagcagctaagactgtgaagcttgaatccaacgcacagattggg
tactttttccgagtcacatgcaaagaagagaagagtcttcgcaacaacaagaaattcact
actttagatgttcaaaagaatggagtgcgattcactaacagtaagctgagctctttgaat
gaagagtacactaaaagcagagaagagtatgaagaggctcaaaatgccattgtcaaagag
atcatcagcatagctgcaggctatgtggatccagtacagactctgaatgaggtgatagct
caacttgatgcagtagtgagttttgctgtggtgtcccatgctgctccagtgccttacgta
aggcctaaaatactagagaaagggtcagggagactcattgtaaaggcggcaagacatccc
tgtgttgaagcccaagatgatgtggctttcattcccaatgatgtcaccttcagaaggggc
gaggagatgtttcatatcatcacaggtccaaatatgggtggtaaatctacatacattcgt
caagtgggtgtgatcgtgctgatggcacagattggctgttttgtaccatgtgatgaggca
gagttgagtgtggtggattgcgtgctcgctcgagtgggtgcaggggacagccagatcaaa
ggagtgtccacctttatggctgagatgctggagacggctgctattcttcgatcagccaca
gaggactctcttatcattattgatgaattgggcagaggcacatccacatacgatggcttt
ggtctagcctgggcaatctcagagtacattgccacccgcctcaagtccttctgcctgttt
gccactcacttccatgaactgacgacacttgcacagcaggtttccactgtccgtaacctc
cacgtcactgccctgaccacagacagcactctaacaatgctctacaaggtgaaaaagggc
gtttgtgaccagagctttgggattcatgtggcagagcttgctaacttccccaagcatgtg
attgctaatgcacgggagaaggctttggagcttgaggagttccaagatatctccagagct
gtggaggaagctggacccgaagccaagaaacgctgcctggagaaacatgagggggagagg
atcatcgaggctttcctggctaaggttaaatcaatgcctgttgaaggcatgtctgatgag
gctgtcaaagaggagctgcgcaaactcaaggcagaggtcattggacaaaacaatagcttc
gtcaatgagatagtgacacgttctgccaaagtcaaactgacttcagcctga
DBGET
integrated database retrieval system
