Sinocyclocheilus rhinocerous: 107749508
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Entry
107749508 CDS
T04916
Name
(RefSeq) host cell factor 1-like
KO
K14966
host cell factor 1
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03083
Polycomb repressive complex
srx04980
Cobalamin transport and metabolism
srx05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
107749508
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
107749508
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
107749508
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
srx01009
]
107749508
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
srx03036
]
107749508
03029 Mitochondrial biogenesis [BR:
srx03029
]
107749508
Protein phosphatases and associated proteins [BR:
srx01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107749508
Chromosome and associated proteins [BR:
srx03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
107749508
HMT complexes
COMPASS/SET1 complex
107749508
MLL-HCF complex
107749508
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
107749508
Mitochondrial biogenesis [BR:
srx03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
107749508
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Kelch_5
Beta-prop_ATRN-LZTR1
Kelch_4
Kelch_1
Kelch_3
fn3
Kelch_6
Motif
Other DBs
NCBI-GeneID:
107749508
NCBI-ProteinID:
XP_016420171
LinkDB
All DBs
Position
Unknown
AA seq
1682 aa
AA seq
DB search
MTSPGSVVPGTTGAPLHPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDEL
HVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLAFGGMVEYGKYSNDLYELQASRWE
WKKLKPKALKNGAPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPSHVAAVADTLSW
ETVLMDTLEDNIPRARAGHCAVAINNRLYVWSGRDGYRKAWNNQVCCKDLWYLETERPNP
PSRVQLVRANTNSLEVSWGAVSTSDMYLLQLQKYDIPSATAATSPALNAVPSLPGNSPKS
PAPAAAAPSAQSLPQSGITFVPQSASPTASVLPSTPASPVAASTARGPAILKVAAPQSGT
GTSIVTVRQASQAGKSPVTMTSLPAGVRMVVPTQTTQGTPIGSSPQMSGMAALAAAAAAT
QKIPPSSGATVLNVPAGATIVKTVAMTPGYTTLPNTVKVASPVMVSNPATRMLKTAAAQV
ATPTVSSPTTAARPIITVHKSGTVTVAQQAQVVTTMVGGVTKTITLVKSPLSMGGNLISN
LGKMMSVVQTKPMQTTSVTGQASSNPLTQIIQTKGPLPPGTILKLVTSADGKPTTIITTS
QASGTGHKPTILGISGMSPTTTTKPGTTTIIKTIPMSALHQGAAGVTSSTGVKSPITFIT
SKVMTSGTGTPGKIITAMPKIGTAAGQQGLTQVVLKGAPGQPGTILRTLPMGGVRLVSPV
SGVKPTVTTLVVKGTTGVTTLGTVTGTVSTSLAGGSLASANATLATPITTLGTIATLSSQ
VINATAVSAAQSNLNTVTSTMQPTQVTLITTPSGVEAQPVRDLPVSILASPTSEQPTSTE
SGAGDASGNVTLVCSNPPCETHETGTTNTATTATANMGTGPAGTVQRVCSNPPCETHETG
TTNTATTASANMGAVQRVCSNPPCETHETGTTNTATTASSNMGTAPAGTVQRVCSNPPCE
THETGTTNTATTASSNMGGNQTGTVQRVCSNPPCETHETGITNTATTASSNMGGNQTGTV
QRVCSNPPCETHETGTTNTATTASSNMGGNQTGTVQRVCSNPPCETHETGTTNTATTATC
SMETDEGTAQQSGEASESTTSTEGLQSTAAPQSRAITIVTQATPLPGPAVPSISSITESS
SEAGAEPVVMESSEAESLQAEGQAEAEAVTMQAEFQTEAGAVAMPSDFQAEAVALPSDFQ
GEAVAVAMQAESQAEEGAVPMEHDASSMAEGETAQEQIPTAEMEGVEAASASQAVALALP
PELMSDGQPTTLMVTGLTPEELAVTAAAEAAAQAAATEEAQALAIQAVLQAAQQAVMSSG
DAGGDDQQTHTIPIVLTQQELAALVQQQQQLQAAQQLAAAQAALPTEGLAPADSLNDPSS
ESNGHNEIAAAATSTVVRLLPSTSAETLAPSSTFAPAVVASPAKMQAAAALTEVANGIVA
VKQNPPTVTVKPQVKKENQWFDVGIVKVTNMVVTHFYMPADDAAYVEDDSGTIPDYSQMK
RVDLQPGTAYKFRVAGINTCGRGAFSEISAFKTCLPGFPGAPCAIKISKSPDGAHLTWEP
PSVTSGKITEYSVYLAIQSSQTTEAKPSAPAQLAFMRVYCGPNPSCLVQSSILSNAHIDY
TTKPAIIFRIAARNEKGYGPATQVRWLQESNKDGLSAKPAAKRAVSSPDTKGIGQKKARM
DQ
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcccccggttccgttgtgcctggcaccaccggagctccactgcatccgcgatgg
aagcgggttctgggatggtccgggccggttccccgaccgagacacgggcacagagctgta
gccatcaaggagctgatggtcgttttcggtggaggaaacgaaggaatcgttgacgagttg
cacgtttataatacagcaacaaaccagtggttcataccagctgttcgtggagacattcct
ccaggctgtgcagcttatggttttgtatgtgatggcacacgtctattagcttttggtgga
atggtggaatatggaaagtacagcaatgacctttatgagttacaggcaagcagatgggaa
tggaaaaaattgaaaccaaaagcccttaaaaatggagcaccaccatgccctcgcctgggc
cacagtttttctcttgtgggcaacaagtgctatctttttggggggcttgccaatgacagt
gaagaccccaagaacaacattcccagccatgttgccgctgtagccgacaccttgtcatgg
gagactgttttgatggacactttggaggacaacataccacgtgcacgagcaggacattgc
gctgttgctattaacaacagactttatgtttggagtggacgtgatgggtaccgcaaagct
tggaacaatcaggtgtgctgcaaagatctctggtacctggagacagagcgacctaatcct
ccttcacgggtacagcttgtccgggccaacacaaattctttagaggttagctggggagcg
gtgtctacatcagacatgtacctgcttcagcttcagaaatatgatatcccatcagccact
gctgccacatcaccagccctcaatgcagttccctccctccctggaaactcgcctaagagt
ccagcgcctgccgcagctgctccgtctgctcagagtttgccgcaaagtggcatcaccttc
gtgccccagtctgcttctcccacagcctcagtcctgcccagcacacctgcaagtcctgtg
gctgcctcaacagcacgtggcccagctattttgaaagttgcggcccctcagtcaggcacc
gggacgtcgattgtcactgtgcggcaggccagccaggctggaaaatccccagtcactatg
acatcacttcctgcaggtgttcgcatggtagtgccaacacagaccactcaaggaacgccc
attggcagcagccctcagatgagtggaatggcagctttggccgcagctgctgcagccaca
cagaaaatccctccttcctctggagccactgttctcaatgtgccggctggggccacaatt
gttaaaacggtggctatgacacctgggtacaccactctccccaacacagttaaagtggca
tcacctgtgatggtaagcaaccctgccactcgcatgctgaagactgcggctgcacaggtg
gccactccgacagtgtccagtcccaccacagctgctcggcccatcatcaccgtgcacaag
tctggcacagttaccgtagcccagcaggctcaggttgtgaccacgatggtgggcggagtc
accaagaccatcactcttgttaagagcccactttccatgggaggaaacctgatttccaac
ttgggcaagatgatgtcagtggtacagaccaaaccaatgcagacaacttcagtgactgga
caggcctcctccaacccattgactcaaattatacagacaaagggtcccctcccacccggc
accattctgaaactggtaacgtctgcggatggaaagccaaccaccataattaccaccagt
caagcaagtggcaccggacacaaacccactatcttgggtatcagtggtatgtcccctacc
accaccaccaaaccaggcaccaccactattatcaaaacaatccccatgtctgctctacac
cagggagctgcaggcgtgactagtagtacaggggtgaagagcccaattaccttcatcacc
tcaaaggtgatgacatctggaacaggaactcctggcaaaatcattacagcaatgccaaag
attggtacagcagctggccagcaaggcctaacacaggttgttctgaagggagctcctggt
cagcctggaaccatccttcgcactttgccgatgggaggagtgcgtctcgtgtctccagta
tctggggtcaagccaactgtaaccacgctggttgtcaagggaacaactggtgtaacgaca
cttggcacagtcacaggaaccgtttctaccagcttagctggaggaagcttagccagtgcc
aacgccaccctggcaactcccatcaccactctcggcacaattgccaccctctcaagccag
gtcattaatgctaccgctgtgtcagctgcccaaagcaacctgaacactgtcacctccacc
atgcagcccacccaggtgactctcataactacacccagtggtgtggaggctcagcctgtc
cgagatctgcctgtttccattctggcctctcccacctctgagcagcccacctctactgag
tctggtgcaggcgatgcttctggcaatgttactttagtgtgctccaacccaccctgtgag
actcatgagacgggcaccaccaacacggccaccacagcaacagcaaatatgggcactgga
ccagctggcacagtacagagagtgtgctccaacccgccctgcgaaacgcatgaaacgggt
acaacaaacactgccaccacagcatctgccaacatgggcgctgtacagagggtctgctca
aacccaccatgtgagacccatgaaacgggcaccaccaacacagcaaccacagcatcttca
aatatgggcactgctcctgctggcactgtccagagggtctgctccaacccaccctgtgaa
acccacgagacgggcaccaccaacacggcaacaacagcgtcatctaacatgggcggaaat
cagacgggaactgtgcagagggtctgctcaaacccaccctgtgaaacccacgagacgggc
atcaccaacacggcaaccacagcgtcatctaacatgggcgggaatcagacgggaacagtg
cagagggtctgctcaaacccaccctgtgaaacccacgagacgggcaccacaaacacggca
accacagcgtcatctaacatgggcgggaatcagacgggaacggtgcagagggtctgctcg
aacccaccttgtgagactcacgagacgggcaccaccaacacggcaaccactgcaacctgc
agtatggagacagatgagggaacagcccaacagagtggtgaagcgtcagaatctaccact
agtacagaaggcctgcagtccactgcagctccccagagcagagccattaccatagtcaca
caggccacacctctaccaggaccagctgttccgtctatctcttcaatcacggagtcgtcc
tcagaggccggagctgagccggttgttatggagagctcggaggcagagtctttgcaggca
gaaggccaggctgaagcggaggcagtcacaatgcaggcagagtttcagacagaggcgggg
gcagtagctatgcccagtgacttccaggcagaggcagtggccttgccgagtgacttccag
ggagaagccgtagcggtagccatgcaggcagagagccaggcggaggaaggggcagtgccc
atggagcatgacgcttctagcatggcagagggagaaacggctcaggagcagatacctaca
gcagagatggagggtgtagaagcggcgtcagcatcacaggccgtggcactggccttgcca
ccagagctgatgtcagatgggcaacccacaacgctgatggtgactggtctgaccccagag
gagctggccgtcacggcagccgcagaggcagcggcccaggctgcagcgacagaggaggcc
caggccctcgccattcaggctgtactgcaagcagcacagcaggctgttatgagctccggt
gatgccggaggagacgaccagcagacccacaccatacccatcgttctgacccagcaggaa
ctagctgctttggttcagcagcaacagcagctccaggcagcccagcagctagctgctgct
caggccgcactacccacagagggcttggctccggctgacagcctaaatgatccctcctca
gaaagcaatggacataacgagatcgccgccgctgccacaagtacagtagtcagactgctg
cctagcacctcagcagagaccttggctccatccagcacattcgcacctgcagtggttgcc
agtccagctaaaatgcaggcagctgcagctctgactgaagtggccaatggtattgtggct
gtgaaacaaaaccctcccactgttacggtcaaacctcaagtgaagaaagaaaaccagtgg
tttgatgttggcattgtcaaagtgaccaatatggttgtaacacatttctacatgcctgca
gatgacgccgcttatgttgaggatgattctggcacaatccctgactacagccagatgaag
agggtggaccttcagcccgggacagcctacaaatttcgtgtggcgggtataaacacgtgt
ggccgcggagccttttctgaaatatctgctttcaagacctgtttgccgggcttcccaggt
gcaccgtgtgccataaagatcagcaagagtccagacggtgcccaccttacatgggagcct
ccatccgtgacatcaggaaagatcacggagtattctgtgtatttggccatccagagcagc
cagaccaccgaggcaaaaccctcggccccggcccagcttgccttcatgcgcgtttactgt
gggccaaatccctcgtgcctggtccagtcctccatcttgtccaacgcccatatagactat
accaccaaacccgccatcatcttccgcatcgcggcacgcaacgagaaaggttacggcccg
gctacacaagtgcgatggctgcaagagtctaacaaagatggcctttctgcaaagcctgcc
gcaaaaagagcagtttcttcaccagatacgaaagggattggtcagaagaaagcaagaatg
gaccagtga
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