Sinocyclocheilus rhinocerous: 107749595
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Entry
107749595 CDS
T04916
Name
(RefSeq) protein SCAF8-like isoform X1
KO
K13191
RNA-binding protein 16
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srx03021
]
107749595
03041 Spliceosome [BR:
srx03041
]
107749595
Transcription machinery [BR:
srx03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
107749595
Spliceosome [BR:
srx03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
107749595
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
Transformer
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
107749595
NCBI-ProteinID:
XP_016420252
LinkDB
All DBs
Position
Unknown
AA seq
1296 aa
AA seq
DB search
MEAVKAFNGELYSLNEYKPPISKAKMTQITKSAIKTIKFYKHVVQSVEKFIQKCKPEYKV
PGLYVIDSIVRQSRHQFGQEKDVFAPRFSKNIITTFQNLYRCPADDKSKIVRVLNLWQKN
SVFKSDIIQPLLDMAAGLPPPSVTPVSASSAVPVNSTTPGTPATPATPANIVQSLPDWAS
QISNTDTVAAVAQILQSPQGQQLQQLVQSLQMQQQKPQPSLLQALDAGLVVQLQALTAQL
TAAAAANTLNPLEQRVSSFNKKLLGQFDFRNESEHSEDSKKDATPSQLPVVPESINSSIF
HQLAEHLQQQNLEQFQKQLMEHQHHQQKSMTMEGQDAIFGLENSAPPGQSSAPPQLPEQE
AKMDDSIDNQQQDMDIDEGQDTVDEELFEAEEKKTSSTRSRTRSRSRSRSPKRRRSRSRS
GSRKRKHRKRSRSRSRDRKRKSSRSYSSERRAREREKERQKKGLPPIRSRVLSVCSTTLW
VGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYICMVHRQDAYRALQKLSTGSYKIG
SKVIKIAWALNKGVKQEYKQFWDVDLGVTYIPWEKVKLDDLDDFAEGGMIDQETVNNEWE
SQRNTETAKETQNQAVTAETSTASSTPSEAFTQPVAMMPMQIPVAQTVPAVGLVPPSFPV
TMAIPPPGFGPPPPFLRAGFNASQPPPGFMATPGVGPSVLGTSLASAQTSLVQPSLPTIQ
ENSKDSLFGAMIPPTSTIPGSFIPSAMPGAGVFNPVGAQHQQSSADKMPQSAEMMETASE
MTLQGMQNAVRSGMGLLGLHPSASLTHPLSGQRMAGLLPLELRPNLLQGPGGRFPLLMQP
GLAHQTNNVLDASLQAQARVRVPFSQMEQFNRAEGTFARAPNPSSAGADNLAKADNETPP
RSDVGAQQEGDQDYRFPPPEKQSTGLLKTPPLEMRTEPVPARPPLLERPPRTVMQAEGRE
GRRENMSGGFRAESRWGPPRGDFDERDMRGMSAGPPKGFQEERSNPNFQNRFEGRSGSSS
GPAWNRGTGPSFNANMHQDYDDRRRPWERQKDRDERDMDFRGEMNGNRQRERERDRNRDR
ERGRERNRERDREWERERDRERENEKDKERERKCWTPLSSQSQPQPLLPKSQPLLPLPTP
LVAQPEVQEQVQINSPSLPVPQHQRHAEPQPTEREAEPQPEVMPELQSQPKSLSSAEEMA
SSQEQEETSRINGMETGSKPQLNILEPASQTATEPSRSPSPSLTSTPTCFQNEPLKREKT
PEMSVSSSLDADTEQTGPKVNAETEPELEKTDTEET
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtcaaggcgtttaacggcgagctgtactcactgaatgaatacaagccaccg
atctccaaagcaaagatgacccagattacaaaatcggcaattaaaactataaagttctac
aagcatgtcgtccaaagtgtggagaaatttattcagaagtgcaagcctgagtacaaagtc
cctggtctgtatgtcatcgactccattgtacggcagtctcgtcaccagtttgggcaagag
aaagatgttttcgctccacgctttagtaagaacatcattacaactttccaaaacctctac
cgctgcccagctgatgacaagagtaagattgtccgagtactaaatctatggcagaaaaac
agtgtctttaagagtgacatcatccagcctctactggatatggcagcagggctcccaccc
cccagcgttacgcccgtctctgccagcagtgccgtacccgttaacagcactactcccgga
actccggcaactccagccaccccagccaacatagtgcagagtctcccagactgggcgtct
cagatctccaacaccgacacagtggctgcggtcgcccagatcttacagagtccccaaggc
cagcagttgcagcagctggttcagagcttgcagatgcagcagcagaaacctcagccctct
ctgctgcaggcgctggatgcaggattggtggtgcagctgcaggccctgactgcacagctc
actgcagccgcagcagccaacacgctcaacccgctggaacagagagtttcctcctttaac
aagaagctgttgggtcagttcgattttaggaatgagtcggagcacagtgaggattctaag
aaagatgctacaccatctcagttacctgtggtgccagagtccattaatagctcaatattt
catcagctggccgagcatcttcagcagcaaaacctcgagcagtttcagaaacagctaatg
gagcaccagcatcatcaacagaagtctatgaccatggagggccaggatgccatctttggt
cttgaaaattctgcccctcctggccagagcagcgccccaccacagctcccagaacaagaa
gcaaaaatggatgactccattgataaccagcaacaggacatggatattgatgagggacag
gatactgtagatgaggagctctttgaggctgaggagaagaaaaccagcagcacccgttca
aggacacgctcgagatctcggtccaggtcacctaagagaaggaggtcaaggtctcgctca
gggtctcggaagcgcaaacacagaaagcgatcacggtctcgctcaagggacagaaagagg
aagtcctcacgttcttattccagtgagcgacgagcgcgggaaagagaaaaggaacggcag
aaaaaagggcttcctccaatccgctcaagggttctaagtgtttgcagcactactctatgg
gtcggccaagtggacaagaaggccacccaacaagatcttactaacctcttcgaagagttt
ggccagattgaatctatcaatatgattccacccagaggctgtgcttacatctgtatggtt
catcgtcaggatgcataccgcgcccttcagaaactgagcactggctcctacaaaatcggt
tcaaaggtcatcaaaattgcttgggccctcaataaaggggtgaaacaggagtataagcag
ttctgggatgtggaccttggggtgacttatatcccttgggagaaggtcaaactagatgac
ctggatgactttgcagagggaggcatgattgaccaagagactgtcaacaatgaatgggaa
tcccagagaaatactgagactgccaaagagactcagaatcaggctgttacagctgaaacc
agtacagcaagcagcacaccaagtgaggcctttacccagcctgtcgctatgatgcccatg
cagattccagtggcacagacagtccctgctgttggcctcgtgcctccatccttccctgtc
accatggcaattcccccaccaggctttggtcccccaccaccatttctaagggcagggttc
aatgcctcacagcctcctccaggtttcatggctacgccaggagtaggtccatcagtgctt
ggaaccagtcttgcttcagctcagacctctctagtgcagccttcgctgccaaccattcaa
gagaacagcaaggattctctttttggagccatgattcctcccaccagtactattcctggg
agttttattccatcagcaatgcccggggcaggagtctttaaccctgtgggagcacagcat
cagcagagcagcgctgacaaaatgcctcagtcggctgaaatgatggagacagcttctgag
atgacactacagggaatgcaaaatgcagtgcgcagtggaatgggtctgctaggtttgcac
ccttctgcatctctaacacatcctctctctggccagaggatggcagggctgcttcccctg
gaactgcgacccaacctgctccagggacctgggggccgcttccccctgctcatgcagcca
ggccttgcacatcagaccaacaatgtcctggatgcttcacttcaagcccaagcccgtgtt
cgggttccattctctcaaatggagcagttcaaccgtgctgaaggcactttcgcaagggca
cctaacccctcatctgctggagctgacaatctggccaaggccgataatgagacaccaccc
aggtcagatgtaggtgcccagcaagaaggagatcaggactatcgctttccaccgccagag
aagcagagcacagggttgttgaagacccctcctttggagatgcgtactgaacctgtgcct
gccagaccacctttactagaacgacctccaagaacagtcatgcaagctgaaggtcgagaa
ggtcgaagagaaaatatgtcaggaggtttcagggcagaaagtcgctggggaccacccagg
ggtgacttcgatgagcgagacatgagggggatgtctgctggacctccaaagggttttcag
gaggaacgttccaaccctaactttcagaatcgttttgagggccgcagcggaagttcatca
ggacctgcttggaatcgtggaactgggccttcttttaacgcaaacatgcaccaggactac
gatgatcgtcgcagaccttgggaaaggcagaaggaccgagatgaacgggacatggacttc
cggggcgaaatgaatggcaatcgtcaacgtgaaagggagagggacaggaatcgggaccgt
gaacgtggcagagagcggaatcgcgagagagaccgagaatgggagcgtgaaagggacaga
gagagggagaacgagaaggataaagagcgggaacggaaatgctggactcccctttcttca
caatctcagcctcaaccgctgcttcccaagtctcaaccgctgctccctctgccgaccccc
ttggttgctcagcctgaagtacaagaacaagtgcaaattaactcaccgtctctaccggtg
ccccaacaccagcgtcatgcggaaccacagccaacagaacgagaagctgaaccacaacca
gaggtaatgccagagctacagtcgcagcccaagtcactcagctccgctgaagagatggca
agtagtcaagagcaggaggaaacctcacgaatcaatggaatggagaccggatcaaaacct
caattaaacattttggaacctgcatcccagaccgctacagagccctctcgtagcccctct
ccatcccttacctccacacccacctgcttccagaatgagcccttgaaaagagagaagacc
ccagaaatgtctgtttcctcatctctggatgcagacactgaacagactgggccaaaggtg
aatgctgagactgaacctgagctagagaaaacagacactgaggaaacataa
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